Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02085 ATGGTATACTCTGGTAACGTTAATTTCATCCCATGTCCAATTCCCCCCTTCCTCTCCTCCCCCGGTGCACTACAACGCCCTGCAACGTGGTTAATTAAAATCCATTTATTTGTGCCCCCCGCGACAGATGATGTTAGGGAAGGATATTTTGCTGTTCTTGCAACAAAGGATGGAGAATCCAAAAAGTTCATTGTTGGATTACATTACTTGAATAACCCTGCATTCCTTGCACTTCTGGATCAAGCTGAGGAAGAGTTTGGTTTCAGGCAAAAGGGAGCTCTTGAAATCCCATGTCAGCCTCTAGAATTACAGAAGTTTTTAGATGGTCACAGAGTGTAG 339 0.4366 MVYSGNVNFIPCPIPPFLSSPGALQRPATWLIKIHLFVPPATDDVREGYFAVLATKDGESKKFIVGLHYLNNPAFLALLDQAEEEFGFRQKGALEIPCQPLELQKFLDGHRV 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02085 112 Pfam Auxin responsive protein 42 105 IPR003676 GO:0009733
Pste4g02085 112 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02085 Pste-Chr4 15242983 15243568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02085 42 99 Calmodulin-binding Proteins AT4G31320 46.552 1.03e-09 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02085 4 15242983 15243568 Pste4g02085 4 15242983 15243568 ECH