Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02077 ATGATGCTTAGGTCTTTCATTGGGAAGATAGAAAAGGGTGTTTCACACTTTGTTCACAGAAGGCCCTACTTGAGTGAAGCCACAAGTGTGGTGCCAGATGATGTTAGGGAGGGATCTTTTGCTGTTCTTGCAACAAAAGGTGAAGAAACAAAAAGGTTCATTGTTGGGTTGCATTACCTGAATGATCCTGCTTTTTTAAGACTGCTGAATCAAGCTGAGGAAGAGTTTGGTTTCAAGCAAAAGGGAGCTCTTGCAATCCCGTGTCAGCCTCAAGAATTACAGAACATTTTAGATGGTCACAGGCATAAGGTCGTCGATTTCAAGATGATTAGGTCCTTCGTTTGGAAGATGCAAAAGGGTGTCTCACTAATTGCGCCCAGAAAGCCTACACTCAATAACTACAATGTTGTGCCCGATGATGTTAGTAAAGGGTATTTTGCTGTTGTTGCAATCAAAGATGGAGAAATTAAAAGGTTTGTGGTTGAATTAGACTACTTGACTAATCCTGAATTCTTGGGACTATTGGATCAAGCTGGAGAAGAGTATGGCTTCAACCAGCAAGGAACTCTAGCAGTCCCTTGTAGGCCTCAAGAGTTACAGAATATTCTAGATGGTTGGAGAATGAGACCAGACACCATCAACGGTGCAGGAATGGATATCTATTTTCCTAAGTTCCTATGA 681 0.4185 MMLRSFIGKIEKGVSHFVHRRPYLSEATSVVPDDVREGSFAVLATKGEETKRFIVGLHYLNDPAFLRLLNQAEEEFGFKQKGALAIPCQPQELQNILDGHRHKVVDFKMIRSFVWKMQKGVSLIAPRKPTLNNYNVVPDDVSKGYFAVVAIKDGEIKRFVVELDYLTNPEFLGLLDQAGEEYGFNQQGTLAVPCRPQELQNILDGWRMRPDTINGAGMDIYFPKFL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02077 226 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 96 IPR003676 GO:0009733
Pste4g02077 226 Pfam Auxin responsive protein 28 97 IPR003676 GO:0009733
Pste4g02077 226 Pfam Auxin responsive protein 135 203 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02077 Pste-Chr4 15201990 15207755 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02077 138 194 Calmodulin-binding Proteins AT5G20810 43.860 6.27e-09 52.4