Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02064 AGCCAAACCCCTCCTTCTTCTTGAAGTGGCGAGTGAGTAGAAAAAAAGCAGAGCCAAACCCCAAACTCTGAAAATTCTCTGCATGTTCTAACAAATCACTATAACCGTCCGCGTCAACTCAACTCAACTCAACTCGCCCGAGTCATCATCATGGCCAATCACCCCTCCGAGGCTCCCGCCGACGACTTCTTAGAGCAAATCCTCGGTATCCACACCTTCGCCTCCGCCGACCCCGCCTTGGCCGCCGACGCCTCTCCGATGATGCTCCAGCTCAACTCCGGCGACGCCGCGAACCACCTCGCCGCCTTCCACGCGCCGCCCTACCAGTTGGGCCTCAGCTTGGACCAGGGCAAGTCACCCTTCCTCACTCCCGAGGATGCTTCTGGAAGCGCCAAGCGCTTCCGCGACGACGTCGTTGATATAAGACCTAAGAATGTTTTTCATGGGCAACCCATGCCTACTACTGTTCCTACTGCTCCACATCCACCAGCAGTGCGACCTAGAATGCGGGCTAGAAGAGGACAGGCTACAGATCCACACAGTATAGCTGAAAGGTTGCGCAGAGAGAGAATAGCAGAAAGAATCAGGGCTTTGCAAGAACTGGTTCCTAGTGTCAACAAGACAGATAGAGCTGCAATGCTGGACGAAATTGTGGATTATGTCAAGTTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGACTGGGCGGAGCTGGTGCTGTGGCTCCACTGGTTACTGACATCCCATTATCATCAGTTGAGGAAGAAGGTGGTGAGGGGAGAAACCAGCCAGCTTGGGAGAAGTGGTCAAATGATGGCACAGAAAGACAGGTAGCTAAGCTTATGGAAGAAAATGTTGGGGCTGCCATGCAGTTTCTTCAATCGAAAGCACTCTGCATCATGCCTATCTCACTGGCATCAGCAATCTACCAATCACAACCATCAGATACCTCTAGTATAGTTAAGCCTGAAACTAATCCTCCTTCATAGACAGACCTCAGGTACAGATGCACCATCCAGTGGTCCCATCAATGGCTCACCTAACATTGCTTTGACCCACACGTTAGTTGTCTGTTGCAAACCCCCCTAATCTTAGTCATTGGTTCGTATCAAGTTGCATTGAAAGTAGGACGCCATAGTCTTTTCCTTTTTGCTGTTCTTTCAACTTTTGTCAAGACAAGGGTTTGATGCCAATGCCCTTCAAAATACAAGCAAACCCGATCTTGATAAATTTCATGTAAAGGGAAAGAAATTGTCGAAGTTCACTTGATTTGCCCTTCCTTTTTGTATCAATTGGTGGGGATTAGTGGAACATGATGGAAGCGCTTTTATAGTGGGGATTGGTTTTTGTAGTGGGCTGTGGGACCTTCTAAAAGGTTAGGGTGGTGTGTATATATTTATCAGTGATGTAACTCCTATAGAATTTGAAATGCAGAGGTGAAATGGATAATGGTTGCTTTAACAATGCTGGTGTTACAAGTCCAGCAGAAAATGATGGTACTTTTGTTTCATTGGGGTGTGCGTGCATTATTTATTTG 1541 0.477 MANHPSEAPADDFLEQILGIHTFASADPALAADASPMMLQLNSGDAANHLAAFHAPPYQLGLSLDQGKSPFLTPEDASGSAKRFRDDVVDIRPKNVFHGQPMPTTVPTAPHPPAVRPRMRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPSDTSSIVKPETNPPS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02064 280 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983
Pste4g02064 280 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 123 184 IPR036638 GO:0046983
Pste4g02064 280 MobiDBLite consensus disorder prediction 95 129 - -
Pste4g02064 280 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 78 259 - -
Pste4g02064 280 Gene3D - 120 182 IPR036638 GO:0046983
Pste4g02064 280 SMART finulus 131 180 IPR011598 GO:0046983
Pste4g02064 280 FunFam Basic helix-loop-helix transcription factor 120 182 - -
Pste4g02064 280 Pfam Helix-loop-helix DNA-binding domain 130 174 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02064 Pste-Chr4 15092084 15096917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02064 53 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 80.426 3.76e-117 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste4g02064 HLH 9.9e-08 No_clan