Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02045 GAAAACCGAAGTTCCAAACTCTCTCTTCCCCTGTTTCTCTCTCGGTGTCTCCAAAATTTCCTCTTCGAGTTCTCACCACATGTCGCTTTCCCATTTTTCTTTTCTCTACAGAACAAGCAAACTGAACATTAACCCACTGAGACATCATCTGTTCCCACTCTTACAAGATAAGACTCACACACAACACAACAATACTACTACTAAATACCAACACCAACGTTAGTATAGCAACACACACCCCCCACGCAGTATTCACATACCCCCAATCACAAACAACAACAAGAATGAAGAATAACCATAGAGAAAGAGAGTGAGTGAGAGTTACAATTCAGATTAAATAAGTCAGAGAGAGAACAGAAAGATAAAAAAAGGTTGGTACTTGGAAGCAGAGTCATGAGCTCCATAAAAGTCAGGTAGAAGAACAGTGAGAAATGATAAAAGTGTAAAGGAAGGGTGGTGAGAAGGTTGTCATTCATAAAGCTTAGGAATTTTTGTTTTGAGTTTTTTCAATGTCACAGAATTCTGAGGAGATAAAGACAGTTGAGCAGTGGAGATGGTCTGAAATGCAAGGCCTTGAGCTTGTGTCTCCTTCTGCTCCTGTTTCTGACTCACATGAATCCAACCCAACATTGGGAGAGAAAAGAGAAGAAAGGGTAATGGAGGAGGCTTCAGTGGCTAAGAAAGATGCTGTTTCCAATGGTACTTGTAGTGGTGGGAGTGGGGAGAAGAAAGATAAGAGTGTTTCTTCTGTTGGGTTTGGTGAGCTTTTCAGATTTGCTGATGGGTTGGATTACATCCTAATGGGAATTGGAACTGTTGGAGCATTTGTACATGGCTGTTCCTTGCCACTCTTCCTTCGTTTCTTTGCTGATCTTGTGAATTCATTTGGTTCCAATGCGAATAACTTGGACAAGATGACCCAGGAAGTGGTGAAGTATGCGTTTTACTTTCTGGTGGTGGGAGCTGCAATATGGGCATCCTCGTGGGCAGAGATTTCGTGTTGGATGTGGACAGGTGAACGGCAATCAACGAGGATGAGGATCAGGTATCTGGAAGCAGCGTTGGACCAGGACATTCAATTCTTTGACACTGATGTTCGAACATCCGATGTTGTTTTTGCCATTAACACTGATGCTGTCATGGTTCAAGATGCCATTAGCGAGAAGTTGGGTAATTTCATTCACTACATGGCTACATTTGTTTCTGGATTTGTTGTGGGTTTCACTGCGGTTTGGCAATTGGCACTGGTGACCCTCGCAGTGGTCCCTATAATAGCAGTGATCGGAGGCATTCACACCACCACCTTGGCCAAGCTATCTAGTAAAAGCCAGGAAGCTCTTTCTCAAGCTTGTAACATTGTGGAACAGACTGTTGTTCAAATTCGAGTTGTATTGGCCTTTGTTGGGGAGACTAGAGCACTACAGAGCTATTCATCTGCATTGAGGATTGCACAGAAGCTTGGCTACAGGACTGGATTTGCCAAGGGAATGGGATTGGGGGCCACTTACTTTGTTGTTTTCTGTTGCTATGCTCTTTTGCTTTGGTATGGAGGCTTTTTGGTTAGGCACCACTACACCAATGGAGGACTTGCCATTGCCACCATGTTTTCTGTTATGATTGGTGGATTGGCTTTAGGCCAGTCTGCACCCAGCATGGCTGCATTTACAAAAGCCAGAGTTGCTGCTGCGAAGATTTTTCGTGTGATTGATCACAAGCCGAGTATAGACAGAAAGAGTGAATCAGGTTTAGAGTTAGACAGTGTTTCAGGACTAGTAGAGCTGATAAATGTGGACTTTGCATACCCTTCAAGGCCAGAGGTTATGATCCTAAACAATTTTTCCCTGAGTGTGCCTGCTGGCAAGACCATTGCTTTGGTAGGGAGCAGTGGGTCAGGCAAAAGCACAGTTGTGTCCCTCATTGAGAGATTCTATGATCCTTCTTCAGGAAAAGTATTGCTAGATGGGCATGATGTTAAGACATTGAAGCTCAGATGGCTGAGACAGCAAATAGGACTAGTGAGCCAAGAGCCTGCTTTGTTTGCCACCACAATTCGAGAAAACATACTTTTGGGTAGGCCTGATGCGCACCAGGATGAGATTGAAGAAGCCGCCAGAGTGGCTAATGCTCACTCCTTCATCATCAAACTTCCCGATGGTTATGAAACTCAGGTAGGGGAGAGAGGGCTGCAACTTTCAGGAGGACAAAAGCAGAGAATAGCAATTGCAAGGGCAATGTTGAAAAACCCAGCAATTCTTCTGCTAGACGAGGCAACAAGTGCACTGGACTCAGAATCAGAAAAGCTGGTTCAGGAGGCCCTTGATCGGTTCATGATTGGAAGAACAACTCTTGTAATTGCTCATCGCCTCTCCACAATTCGCAAAGCTGATCTTGTTGCCGTGCTTCAGCAAGGAATTGTCACTGAGATTGGAACTCATGATGAGCTCTTTGCTAAAGGTGAAAATGGAGTGTATGCCAGGCTTATCCGGATGCAGGAGATGGCACATGAAACTTCTATGAACAATGCCAGAAAGAGTAGTGCAAGGCCTTCCAGTGCAAGAAACTCTGTTAGCTCACCCATAATTGCTCGGAATTCTTCTTATGGCCGATCACCATACTCAAGGAGACTATCTGACTTCTCTACATCTGATTTTAGCCTGTCCCTTGATGCATCACATCCAAATTACAGGCTTGAAAAGCTTGCCTTCAAAGATCAAGCTAGTTCCTTCTGGCGACTAGCAAAAATGAACTCGCCTGAATGGTTATATGCCTTAATTGGTTCTATAGGATCTGTTGTTTGTGGATCCCTTAGTGCATTTTTTGCTTACGTTCTTAGTGCTGTCCTCAGTGTCTATTACAATCCAAACCACAGACACATGATCCGAGAAATTGAAAAGTATTGTTACTTGTTGATTGGACTTTCATCAGCTGCACTCCTCTTCAACACATTGCAGCACTCCTTCTGGGATATTGTTGGTGAAAATCTTACAAAACGAGTGAGGGAGAAAATGTTGACTGCGGTGCTTAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGGATTGCGGCAAGGCTATCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGATCGGATTTCAGTAATTGTGCAAAACACTGCACTTATGCTAGTTGCCTGCACAGCAGGGTTTGTATTGCAATGGCGCCTTGCCCTTGTACTAGTAGCCGTCTTCCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTGGAATCTGCTCATGCCAAGGCCACTCAACTAGCAGGAGAGGCTATAACCAACGTAAGGACAGTTGCTGCTTTTAATTCAGAAAAGAAAATTGTTGGTCTTTTCACCTCCAACCTAGAAACTCCGTTACGGCGCTGCTTTTGGAAGGGACAGATTTCTGGAAGTGGATATGGGATAGCTCAGTTTGCACTCTATGCTTCATATGCTCTTGGTCTTTGGTATGCTTCTTGGCTTGTAAAGCATGGTATATCTGATTTCTCTAAAACAATCCGAGTTTTTATGGTACTCATGGTCTCTGCCAATGGTGCTGCTGAAACTTTAACCCTGGCTCCTGACTTCATCAAGGGTGGTCGTGCCATGAGATCAGTCTTTGATCTCCTTGACCGAAAAACAGAGATTGAGCCAGATGATCCAGATGCTACCCAAGTCCCTGATCACCTTCGTGGTGAAGTAGAACTTAAGCATGTTGATTTCTCTTATCCTACTAGACCTGATATGTCAGTGTTTCGTGACCTTAACCTTCGCGCCAAGGCAGGTAAAACTCTTGCCCTTGTAGGGCCTAGTGGCTGTGGTAAGAGCTCAGTCATTGCACTTATACAAAGGTTCTATGATCCTACATCTGGACGGGTCATGATTGATGGAAAGGACATAAGGAAATACAATCTCAAGTCTCTTAGAAGGCACATTGCTGTGGTACCTCAGGAGCCATGCCTATTTGCTACTACTATTTATGAGAACATTGCATATGGACATGACTCAGCAACTGAAACTGAGATCATAGAGGCTGCAACACTTGCAAACGCTCACAATTTCATATCTTCTCTGCCTGATGGATACAAGACATTTGTTGGTGAGAGGGGAGTTCAACTATCTGGAGGACAAAAGCAAAGAATAGCAATTGCTAGAGCTTTTGTGAGGAAGGCAGAACTTATGCTTCTTGATGAGGCAACAAGTGCACTTGATGCCGAATCTGAGAGGTCTGTTCAGGAGGCGTTAGACCGTGCTTCCTCGGAAAAAACTACTATCATTGTTGCACACAGGCTATCAACTATTAGGAATGCCAATCTCATTGCAGTGATTGATGATGGGAAGGTAGCAGAGCAAGGCTCCCATTCACAGTTGTTAAAAAACCATCCTGATGGGATCTATGCACGCATGATTCAATTACAAAGGTTCACAAATAACCAAGTCATTGGGATGGCTGCAGGTTCAAGTTCTTCTGCAAGGCCAAAAGATGATGAAAGAGAAGGCTAGCAGCTAATTATTCAAAAGAAAAAAGGAGTATATGCCATATACCAATTATAATTGTTGGCATTTTTGTTTTGACCATAGTATAGTTTGTGTAACTTCCCCCAACTCCCATTTAAGAATGTATCTTCTAGTCTTCATGAATCTTACTCAGGAAGAATTATTCAACAATGAGATTGAAACAGATAAATACATGTCCA 4735 0.4353 MSQNSEEIKTVEQWRWSEMQGLELVSPSAPVSDSHESNPTLGEKREERVMEEASVAKKDAVSNGTCSGGSGEKKDKSVSSVGFGELFRFADGLDYILMGIGTVGAFVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIRYLEAALDQDIQFFDTDVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPIIAVIGGIHTTTLAKLSSKSQEALSQACNIVEQTVVQIRVVLAFVGETRALQSYSSALRIAQKLGYRTGFAKGMGLGATYFVVFCCYALLLWYGGFLVRHHYTNGGLAIATMFSVMIGGLALGQSAPSMAAFTKARVAAAKIFRVIDHKPSIDRKSESGLELDSVSGLVELINVDFAYPSRPEVMILNNFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPSSGKVLLDGHDVKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDAHQDEIEEAARVANAHSFIIKLPDGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGIVTEIGTHDELFAKGENGVYARLIRMQEMAHETSMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASHPNYRLEKLAFKDQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNPNHRHMIREIEKYCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLESAHAKATQLAGEAITNVRTVAAFNSEKKIVGLFTSNLETPLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATQVPDHLRGEVELKHVDFSYPTRPDMSVFRDLNLRAKAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDSATETEIIEAATLANAHNFISSLPDGYKTFVGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATSALDAESERSVQEALDRASSEKTTIIVAHRLSTIRNANLIAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFTNNQVIGMAAGSSSSARPKDDEREG 1343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02045 1343 Pfam ABC transporter 1096 1244 IPR003439 GO:0005524
Pste4g02045 1343 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 422 658 IPR003439 GO:0005524
Pste4g02045 1343 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 100 387 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g02045 1343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1068 1316 IPR027417 -
Pste4g02045 1343 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 754 1041 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g02045 1343 FunFam ABC transporter B family member 1 85 420 - -
Pste4g02045 1343 Gene3D - 1067 1324 IPR027417 -
Pste4g02045 1343 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1077 1313 IPR003439 GO:0005524
Pste4g02045 1343 FunFam ABC transporter B family member 1 412 662 - -
Pste4g02045 1343 FunFam ABC transporter B family member 1 733 1042 - -
Pste4g02045 1343 CDD ABC_MTABC3_MDL1_MDL2 1077 1316 - -
Pste4g02045 1343 MobiDBLite consensus disorder prediction 25 77 - -
Pste4g02045 1343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 661 IPR027417 -
Pste4g02045 1343 CDD ABC_MTABC3_MDL1_MDL2 422 661 - -
Pste4g02045 1343 Gene3D - 420 685 IPR027417 -
Pste4g02045 1343 FunFam ABC transporter B family member 19 1043 1065 - -
Pste4g02045 1343 Pfam ABC transporter transmembrane region 99 371 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g02045 1343 Pfam ABC transporter transmembrane region 755 1024 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g02045 1343 SUPERFAMILY ABC transporter transmembrane region 86 406 IPR036640 GO:0005524|GO:0016020
Pste4g02045 1343 MobiDBLite consensus disorder prediction 38 55 - -
Pste4g02045 1343 SUPERFAMILY ABC transporter transmembrane region 741 1061 IPR036640 GO:0005524|GO:0016020
Pste4g02045 1343 ProSitePatterns ABC transporters family signature. 561 575 IPR017871 GO:0005524|GO:0016887
Pste4g02045 1343 PANTHER ABC TRANSPORTER B FAMILY 57 806 IPR039421 -
Pste4g02045 1343 Gene3D ABC transporter type 1, transmembrane domain 145 1050 IPR036640 GO:0005524|GO:0016020
Pste4g02045 1343 CDD ABC_6TM_Pgp_ABCB1_D2_like 743 1059 - -
Pste4g02045 1343 FunFam ABC transporter B family member 1 1067 1317 - -
Pste4g02045 1343 CDD ABC_6TM_Pgp_ABCB1_D1_like 98 395 - -
Pste4g02045 1343 MobiDBLite consensus disorder prediction 60 74 - -
Pste4g02045 1343 ProSitePatterns ABC transporters family signature. 1216 1230 IPR017871 GO:0005524|GO:0016887
Pste4g02045 1343 SMART AAA_5 449 641 IPR003593 GO:0016887
Pste4g02045 1343 SMART AAA_5 1104 1296 IPR003593 GO:0016887
Pste4g02045 1343 Pfam ABC transporter 440 589 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02045 Pste-Chr4 14987646 14994754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02045 72 1338 Calmodulin-binding Proteins AT2G36910 87.934 0.0 2292