Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02031 TTAATTATGAGTTTAGGAGTCGATAGTGATGAAAATTTGATCTGTGATCTATTGAGCCTGTTCCTCCGTTGACTTATGCCATATAAATTTCTTCTCTGAATAAAAGTTTGAGTGTTGTGTCCAGCCTCTGAGTAAGGAAGCGTGTGTGTTAGGAGAGAAAGAAAAGATGGGTAGAGCTCCTTGTTGTGACAAGGCCAATGTAAAGAAAGGGCCATGGAGTCCTGAAGAAGATGAAAAGCTGAGAGAGTACATAGAGAAACATGGCACTGGAGGGAACTGGATTGCCCTCCCACAAAAAGCTGGTTTGAAAAGATGTGGGAAAAGTTGTAGACTCAGATGGCTCAATTATCTCAGACCAAACCTTAAGCATGGCGAGTTTTCTGAAGATGAAGATAGAATAATCTGCACTCTCTTTGCTAGCATTGGAAGCAGATGGTCAATAATAGCATCTCAGTTGCCAGGCAGGACTGACAATGATATCAAGAACTACTGGAACACCAAGCTCAAGAAAAAAATGATGGGAGTGAATAACTCAGCACCGAAGAAACCTCACCAAGTTACCCTTTCACCCATGCTTCAAAACTCAGCACCATCTTCATCTTCCTCATCATCTTCACCAATATCGTTCAAAAACAACCACAACTCTTGTTACCAACCCCATGTCCCCATGACAACTTCTGAGTCCATTTCATACTCAACTCTTTTGAGTGGCAATTCTTCTTCTACTTCTGCATATTCCACTTTTGAATGCCTTCAGAATTACCAAGTTAACAGTGCCTTTATATTAGGGGGTGAAACAAGTTGTAGCTCTTCTTCAGATGGAAGCTACAATAATAAGATCAGTCATGTCAAAGAAGCAGAATTTGGGCATGGTGACCAGATAGGGGGTCTTAGTTACCTCTCTAGTGGGGTGGAAGATACCCAAAAGTTGATGCCATCCAATGCTGGTAGGGTTAGTGGATGGACAGGTGAACAAAGTAGATTATGGGAAGAAAGTCCATTAGATTATGGTCTAGAAGAAATTAAACAGCTAATAAGCACTAGTAGTTGCAACAACTTTATGTTTGATGACAGCAAGACAGCGGAAATGGTCATGTACTACTGA 1105 0.4109 MGRAPCCDKANVKKGPWSPEEDEKLREYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNLKHGEFSEDEDRIICTLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMGVNNSAPKKPHQVTLSPMLQNSAPSSSSSSSSPISFKNNHNSCYQPHVPMTTSESISYSTLLSGNSSSTSAYSTFECLQNYQVNSAFILGGETSCSSSSDGSYNNKISHVKEAEFGHGDQIGGLSYLSSGVEDTQKLMPSNAGRVSGWTGEQSRLWEESPLDYGLEEIKQLISTSSCNNFMFDDSKTAEMVMYY 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02031 312 Gene3D - 69 134 - -
Pste4g02031 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Pste4g02031 312 MobiDBLite consensus disorder prediction 120 152 - -
Pste4g02031 312 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Pste4g02031 312 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pste4g02031 312 Gene3D - 7 68 - -
Pste4g02031 312 FunFam Transcription factor RAX3 7 68 - -
Pste4g02031 312 SMART sant 13 64 IPR001005 -
Pste4g02031 312 SMART sant 67 115 IPR001005 -
Pste4g02031 312 MobiDBLite consensus disorder prediction 125 152 - -
Pste4g02031 312 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Pste4g02031 312 CDD SANT 16 62 IPR001005 -
Pste4g02031 312 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Pste4g02031 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Pste4g02031 312 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pste4g02031 312 CDD SANT 70 113 IPR001005 -
Pste4g02031 312 PANTHER OS09G0431300 PROTEIN 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02031 Pste-Chr4 14932529 14934198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02031 1 119 MYB Transcription Factor Family AT5G57620 86.555 8.28e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste4g02031 Myb_DNA-binding 2.3e-15 CL0123