Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02005 CGAAATTGCAATTACCATTTCAATACTCAATTTCAACGTTCCTCGCACACAGATCTCAATCCTCTTTCTCAGTTCAACCCCTAACCCTCAATTTCCATGGCAACAGAAGAGACCACTACTGTGGCGGTGGAACCCGCTCCCGAGCCTGCCACCACCGAGCCTCCTCCGGAGGAGAAGGAAGAGACCAAACCTGAAACCAAGGCTAAGAAAACCAAGGAGCCCAAACCTAAGAAGGTTTCCAGACCGCGCAACCCTCCTACTCACCCTTCCTACGAAGAGATGATTAAGGATGCGATTACCTCGTTGAAGGAGAAAACCGGTTCAAGCCAATACGCTATTACCAAGTTCATCGAGGAGAAGCACAAGCAGCTTCCACCAAACTTCAAGAAGCTTCTTCTCTACCACTTGAAGAAGCTCGTCGCTGCTGGAAAACTCGTCAAAGTCAAAGGCTCCTTCAAGCTTCCACCTGCCAGACCCTCTCCTTCTTCTCCCGCAAAGAAGAAGAAGCTCGCAGCGCCCAAGCCTAAGCCCAAGCCCGCCGCCAAGGCCAAGGACACCAAAGCAACCAAATCGAAGGCACCAGCCAAGCCCAAGCCAGCTGCCAAGCCTAAAGCCAAAGCTCCTGCCAAGCCCAAGCCCGCAGCTGCCAAGCCCAAGGCTGCTGCTAAACCCAAGCCAGCTGCCAAGCCTAAAGCAGCTAAGCCAGCTGCCAAGCCAAAGCCTGCCGCTGCCAAGCCCAAAGCTGCTAAGCCCGCCGCCAAGCCCAAGCCGAAGCCCAAGCCCAAGCCCACCAAAGCTGCGAGGACTTCGACGAGGACTTCACCCGGGAAGAAAGCCTCTGCTGCTAAGCCTGCACCAAAGAAAGTTGCCCCTGCGAAGAAAACCCCTGTGAAGAGTGTGAAACCAAAGAGTGTAAAGTCTCCTGCCAAAAAGGCTACAGCTAAGAGAGGGGGTAGGAAGTGAAAGAGTGGTGGCTAGGATTGTTTTAGGGTTAGTGTTGTGAAGTTCATTGTCCTTTTGGTGGTGTAGTTGGGGTTACAGATGTTCCTATAACATATGAAATGATTTTATGAAACCTTTGTTGTTTTTAGTTTGATTTTTTTTTTCTTGGTTCTACCTAGGAAGTAGATATAAAAAGCTTTTAGCTCTGCTTTTAAGCTAAATGAGTAATCATAAATGTATCTTAGAGTTTGAGGTTTCTTTGCCTTACAGTATCTTTGAAGGATCAATGTAGTGTAAGCAGCTTTTTTTTGCATTGGAATGTATTGTAGCATATCTCTTTTGTCTATGATGCTTTGTTTTTATGATATCATTGAGATCTATGATATGAATTCATATGCCTGC 1344 0.4784 MATEETTTVAVEPAPEPATTEPPPEEKEETKPETKAKKTKEPKPKKVSRPRNPPTHPSYEEMIKDAITSLKEKTGSSQYAITKFIEEKHKQLPPNFKKLLLYHLKKLVAAGKLVKVKGSFKLPPARPSPSSPAKKKKLAAPKPKPKPAAKAKDTKATKSKAPAKPKPAAKPKAKAPAKPKPAAAKPKAAAKPKPAAKPKAAKPAAKPKPAAAKPKAAKPAAKPKPKPKPKPTKAARTSTRTSPGKKASAAKPAPKKVAPAKKTPVKSVKPKSVKSPAKKATAKRGGRK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02005 288 MobiDBLite consensus disorder prediction 146 160 - -
Pste4g02005 288 MobiDBLite consensus disorder prediction 117 288 - -
Pste4g02005 288 CDD H15 53 122 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pste4g02005 288 MobiDBLite consensus disorder prediction 21 40 - -
Pste4g02005 288 PRINTS Histone H5 signature 42 63 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pste4g02005 288 PRINTS Histone H5 signature 111 135 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pste4g02005 288 PRINTS Histone H5 signature 187 204 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pste4g02005 288 PRINTS Histone H5 signature 69 86 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pste4g02005 288 PRINTS Histone H5 signature 209 228 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Pste4g02005 288 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 55 124 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pste4g02005 288 Pfam linker histone H1 and H5 family 56 122 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pste4g02005 288 MobiDBLite consensus disorder prediction 272 288 - -
Pste4g02005 288 SMART h15plus2 53 119 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pste4g02005 288 MobiDBLite consensus disorder prediction 1 63 - -
Pste4g02005 288 SUPERFAMILY "Winged helix" DNA-binding domain 52 137 IPR036390 -
Pste4g02005 288 Gene3D - 51 138 IPR036388 -
Pste4g02005 288 PANTHER HISTONE H1 22 253 - -
Pste4g02005 288 MobiDBLite consensus disorder prediction 219 233 - -
Pste4g02005 288 FunFam Histone H1 50 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02005 Pste-Chr4 14839032 14840461 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02005 57 144 Single Myb Histone (SMH) Gene Family AT1G72740 36.364 5.93e-10 57.0