Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01992 CAAGCACTGTTCTAGACAAGTTTGATCATGACAGACATAAAGGAAAACCAACAATCTCCTGATTCTTCAATTTATGCATCAAGCAGTGGTCTGTCTATGGATGATAAGGAGATTCGATATAGAGCTGCGACATCAAAGCATATCCATCTTTTGTCCAGCAACTATGCTCTTAACTTCTTATCCATAAAAATTTATCCTAATTTTGCTCGCATGGTGATGGCAGAGGTGGTGGGTACTTTTATTTTGATGTTCTGTGTATGTGGAATCACTGCAAGCACACAATTCCAAAATGGTGCAGTGGGCCTTCTGGAGTATGCAGCTACAGCAGGATTAACAGTGGTGGTGATAATTTTCTCTATAGGGCCAATATCTTGTGCGCACGTTAACCCAGCTGTCACAATAGCCTTTGCAACAATCGGTCAATTTCCATGGTTCAAGGTTCCAGTTTACATAATAGCACAGACAGTAGGTTCTATGTCGGCAACATACATAGGTAGCCTTGTATACGGCATAAAATCAGATGTTATGATGACCATGCCACTCCAAGGGTGCAACTCTGCCTTCTGGGTGGAGGTTATTGCAACTTTCATCATCATGTTCCTCATTGCAGCTTTGACATCTGAATCTCAATCAGTGGGCCATTTATCCGGCTTTGTTGCTGGAATAGCAATTGGGCTTGCTGTACTAATCACAGGGCCAATTTCTGGTGGATCAATGAATCCTGCAAGATCATTAGGTCCAGCAATTCTTTCATGGAAATTTAAGGACATGTGGATATACATGGTAGCCCCCAGTGGTGGAGCTGTAGCAGGAGCTGTAATGTTTCGTTGCCTACGCCTTAGAGACCAACATTCTAGTACTTTGCCCTCCCCAAACATCAGTGCTTCTGGTTGTCCCATTACCTTTTGCTCAAGGAGAAGTGGGCCCATGATTTTGCTGGTAGAGAAAAATTGGAGTTTATTCTCTGAAAGAGTGGAAGGGTTCAGACAAAGATATGTGTTAAGAACCAAAGGGATGTCAGATGGTGTTCATCATAAGTTGCCACTG 1047 0.4279 MTDIKENQQSPDSSIYASSSGLSMDDKEIRYRAATSKHIHLLSSNYALNFLSIKIYPNFARMVMAEVVGTFILMFCVCGITASTQFQNGAVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGQFPWFKVPVYIIAQTVGSMSATYIGSLVYGIKSDVMMTMPLQGCNSAFWVEVIATFIIMFLIAALTSESQSVGHLSGFVAGIAIGLAVLITGPISGGSMNPARSLGPAILSWKFKDMWIYMVAPSGGAVAGAVMFRCLRLRDQHSSTLPSPNISASGCPITFCSRRSGPMILLVEKNWSLFSERVEGFRQRYVLRTKGMSDGVHHKLPL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01992 340 MobiDBLite consensus disorder prediction 1 20 - -
Pste4g01992 340 Pfam Major intrinsic protein 58 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g01992 340 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g01992 340 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g01992 340 PRINTS Major intrinsic protein family signature 100 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g01992 340 PRINTS Major intrinsic protein family signature 137 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g01992 340 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g01992 340 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g01992 340 PANTHER AQUAPORIN NIP2-1 39 274 IPR034294 -
Pste4g01992 340 SUPERFAMILY Aquaporin-like 55 275 IPR023271 -
Pste4g01992 340 ProSitePatterns MIP family signature. 118 126 IPR022357 -
Pste4g01992 340 Gene3D Glycerol uptake facilitator protein. 24 278 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01992 Pste-Chr4 14782381 14784842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01992 20 274 Major Intrinsic Protein MIP AT4G10380 37.165 5.13e-53 175