Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01966 CAAAAGAACAAGATCCACCTCTTCCATCTTTTTTGAGGTTGGAACAAAGAAAAAAAGAATAGTGAAGAATAGGAGCGTGCGTGGATAACGTGACGAGTATATAAAGCAAGGGGTTCTGAACATTGCCACCTTCGTAGTCTCAACAAAGGGAACGCGATCGAGAATTTGCGAAGCCCTTGTGGAATTTGTGATCTGGTCAGCCATGAATGCTAGAAGAGATGGTCGTAACAACAGAGTTGCTCTTTTTGATGGCATTGAGGAGGGTGGCATCAGAGCATCATCTCTTTACTCCTCAAGTTCTTCCCATGAAATTGATGAACATGATAATGAACAGGCATTGGATGGATTGCAAGATAGAGTCAATCTGCTGAAAAGATTGTCAGGCGATATACACGAGGAAGTGGATAGTCATAACCGGATGCTGGATCGTATGGGAAATGATATGGATTCTTCGAGAGGAGTCCTCTCAGGCACTATGGATAAATTCAAAATGGTATTTGAGACCAAATCCAGCCGAAGAATGTTTTCACTTGTGGCATCCTTTGTTGTGCTTTTTCTTATAATATACTATCTAACTAGGTAAATGGGCTTTTGCGCACTTGTCAGCTTTATGTTATAGATCGGAAAGGATGCTACTTGCTCTATTCCTGTAACTAGTGTTACTACTTGGAAGATGTTCTTTATGTTTGTATAAAGATTTTGCTGTTTCATTTAATCCAACGAGTAATGTCCATATCCAGTTTGTACACCAAAAAATAAAAATAAAAAAAAATCCAATGTGT 782 0.3913 MNARRDGRNNRVALFDGIEEGGIRASSLYSSSSSHEIDEHDNEQALDGLQDRVNLLKRLSGDIHEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSRRMFSLVASFVVLFLIIYYLTR 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01966 126 PANTHER GOLGI SNARE BET1-RELATED 8 125 - -
Pste4g01966 126 SMART tSNARE_6 31 98 IPR000727 -
Pste4g01966 126 FunFam bet1-like SNARE 1-1 43 107 - -
Pste4g01966 126 CDD SNARE_Bet1 39 96 IPR039899 -
Pste4g01966 126 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 36 98 IPR000727 -
Pste4g01966 126 Gene3D - 44 107 - -
Pste4g01966 126 SUPERFAMILY SNARE fusion complex 33 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01966 Pste-Chr4 14561405 14565088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01966 37 125 SNARE and Associated Proteins AT1G28490 26.966 2.36e-06 43.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01966 4 14561405 14565088 Pste4g01966 4 14561405 14565088 ECH