Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01957 CAGAGCTTAAGAGATAACAGTTCCAAATCAGAATCCTCAAACCCCAATTAAAAAGGCCAAGATGACTGGTTCAGGATCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTGAGGGGCTGTGTTTTTGCACCTTACTTTTGCCATGAGCAAGGTGCTACCCATTTTGCAGCCATTCATAAGATCTTTGGTGCAAGCAATGTTTCAAAGCTCCTTGCTCGTCTCCCTGTCAGTGACCGTTGTGAAGCTGCAGTCACAATCTCATATGAAGCTCAAGCCAGACTTCAGGATCCAATTTATGGCTGTGTCTCCCATATTTTTGCACTCCAACAACAGGTGGTCAATTTACAAGCACAGTTAGCTTATCTCAAGGAACAAGCAGCTCATAGTTGTCTCAATGTATCTGTCAACGAAAACCCTAGTGAAAAATTATTTGAAAAATCTTGTGGTGTTTTACCACAAGATCTTCAGAGTTGGTTTCAGGTGGAAAATTCCAACCTGGGGCCACAATGTCTTCCTATCATGTCTACTAATTTATCAACACAACATTATGGGAACAATGCTATCATGGAGGAGATGAATCCTATTGGGATTAATTATGAAAATTCAGGAACCATGGAAGAAAGCAGCTCCTTTTCTAGCTTTGATGAGAGCTCTAACTACTCCATGCCCTATGACATGCAAACAAACAGAAGGACGTGGGGTTTTCATGAAGTGGACGACCTACATTCAGTGGCTTTTGGATACGGAACTCAATCACATTATTCATTAAAGAATTGG 784 0.4133 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKIFGASNVSKLLARLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAAHSCLNVSVNENPSEKLFEKSCGVLPQDLQSWFQVENSNLGPQCLPIMSTNLSTQHYGNNAIMEEMNPIGINYENSGTMEESSSFSSFDESSNYSMPYDMQTNRRTWGFHEVDDLHSVAFGYGTQSHYSLKNW 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01957 241 Coils Coil 87 107 - -
Pste4g01957 241 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Pste4g01957 241 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Pste4g01957 241 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01957 Pste-Chr4 14502795 14503761 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01957 7 230 AS2 family AT3G58190 50.442 2.83e-68 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste4g01957 LOB 7.9e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01957 4 14502795 14503761 Pste4g01957 4 14502795 14503761 ECH
Pste5g01179 5 7631040 7631849 Pste4g01957 4 14502795 14503761 PCT