Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01955 GTTGATCCAGCTGTTAATGGCCTCTCTGTGTCCCCTTTGAAATCCCTTCTGAGTTGTTCGCCTACTGAAAAACGCAGATCGAACGTCATTGACTGGTTTCTCAAGACACAGATCCACTTTTCATTCCTCAACGGCCACAGTATGAGCGTCATCGACATTTTAACCCGAGTCGATTCCATTTGCAGGAAGTACGACAAATACGACGTCGAAAAGCACCGCGATTCCAATATCTCCGGCGACGATGCCTTCGCCCGACTCTATGCCTCCGTTGACGCCGACATCGATGCCCTGCTTCAGAAAGCTGAAACCGCTTCTAAGGAGAAAGGTAAGGCATCTGCTGTAGCGATCAATGCGGAGATTCGTCGAACTAAGGCTCGGTTGCTGGAGGAGGAGGTCCCCAAGTTGCAAAGATTGGCTGTGAAAAAGGTAAAGGGCCTTTCATCACAAGAATTTGCTGCCCGAAATGATTTGGTTCTTGCATTGCCGGATAGAATCCAAGCTATTCCAGATGGGACTCCTGCTGTGCCAAAACAAACTGGAGGTTGGGCTGCTTCTGCCTCGCGTGCTGAAATTAAGTTTGACTCTGATGGGCGATTTGATAATGAATTCTTCCAACAAACTGAGCAATCAAGTCAATTTAGGCAGGAATATGAAATGCGCAGAATGAAACAGGATCAAGGTTTGGATATGATTGCTGAAGGATTGGATACATTGAAAAACATGGCACATGATATGAATGAGGAACTAGATAGACAAGTTCCACTGATGGATGAGATTGACACAAAGGTGGACAAGGCTTCCTCTGACCTTAAGAATACAAATGTTAGACTTAAAGACACAGTAAACCAGCTTCGATCCAGTCGAAACTTCTGTATTGATATTGTTTTGTTGATTATAATTTTGGGAATTGCTGCCTACTTATACAAGTAA 930 0.4462 VDPAVNGLSVSPLKSLLSCSPTEKRRSNVIDWFLKTQIHFSFLNGHSMSVIDILTRVDSICRKYDKYDVEKHRDSNISGDDAFARLYASVDADIDALLQKAETASKEKGKASAVAINAEIRRTKARLLEEEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPDRIQAIPDGTPAVPKQTGGWAASASRAEIKFDSDGRFDNEFFQQTEQSSQFRQEYEMRRMKQDQGLDMIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYK 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01955 309 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 218 280 IPR000727 -
Pste4g01955 309 SMART tSNARE_6 213 280 IPR000727 -
Pste4g01955 309 PANTHER SYNTAXIN 104 300 IPR045242 -
Pste4g01955 309 Pfam SNARE domain 255 304 IPR000727 -
Pste4g01955 309 CDD SNARE_Qc 223 278 - -
Pste4g01955 309 SUPERFAMILY SNARE fusion complex 213 278 - -
Pste4g01955 309 Gene3D - 218 279 - -
Pste4g01955 309 FunFam Putative syntaxin-71-like 218 279 - -
Pste4g01955 309 ProSitePatterns Syntaxin / epimorphin family signature. 224 263 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01955 Pste-Chr4 14492329 14494911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01955 48 308 SNARE and Associated Proteins AT3G09740 76.426 2.36e-149 418
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01955 4 14492329 14494911 Pste4g01955 4 14492329 14494911 ECH