Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01953 ATGTGCAAATCAAAAAAGAACACCAGGGCGGTACAGCCTCGATCAAGAAGAAACACAAACATAAACATGACAAACTCTCCTCGGCCCCACAGAACACGAACTTCAACATCGTCATCGTCGAACTACGAAACCTCCACGAGTGAGGTTCCCATCACCGAATCAAGAAGCTACGTATATGACAACACCATCACCAATGAATTCGAGTGGTCAAACACCTCTTCGATCTCAAGCCGCGCCTCTCTATCCAGCCTCAAAAGCACGCTCCCTGAAAACCCTAACATCTACCACGTCTCCGAGATCGCCGCCGCCACCGCTAACTTCTCCGCGCCGCGCCTCTCCTCCTCCTCATGGCGTTGCCTCATCCGCCACCGCGACGTTGTCGTTTCGCGCCGCAACTTCCGTCAACAAATTGACCTCCCGGAGCTCCAACGCCGCCTCTCCCTCATCTGCCGGAGCCACCATAGAAGCTTCGTCAAGCTCCTCGGTGCCTCCGTATCCGGCGCCGTCATCTTCCTCGTCTACGAATTCGTCCCCGGCGCCAGCCTCGCCGACTGCCTTCGCAACCGCCGGAACCCTAGCTTCACCGATCTCAGCACTTGGACCTCGCGGATGCAGATCGCTTCCGACGTCGCGCACGGCCTCGACTACATCCACAACTTCTCCGGTTCCGGTTCGGATTCCGGTTTCGGTTTCGTTCACAATCACATAAAGACTTCGAGCATTGTCATAACGGAGGATAATTTGCGAGCCAAACTCTGCCACTTCGGAGCGTCGGATCTCACTGGCGAGGCTACCGCCGGCGAAGGAGAGCATTCCGGTGCTCGGACGGTGAGGCTCCAGGGGACGAGAGGCTACATGGCGCCGGAATTTCAGTTGACCGGCGTCGCGACGAAGAAGACTGACGTGTACGCTTTCGGCGTGGTGATTTTGGAGCTTCTGAGCGGGGAAGAGGCCGTGAAATTCGAATTCGACGACGGCGACGGTTACCGGAGGATTAGCGTGGTTGAGACGGCGAGGGTGGCGGTGGAGGAACACGGCGGCGTGAGGAAGTGGGTGGATAAGAGGCTGAAAGATTCGTTTCCCGTGAAAGTGGCTGAGAGAATGATTTGGGTCGGGTTGGAATGCATTAGTGATGACCCGAATGGTAGACCCGACATGGGTCGGGTTTCAATTGAGGTGTCAAAGTTGTATCTGGAATCGAAGGAGTGGGATACGAAAATGGGAATCGATGTTGACGTGTCGGTCTCGTTGGCCCCACGGTGA 1263 0.5614 MCKSKKNTRAVQPRSRRNTNINMTNSPRPHRTRTSTSSSSNYETSTSEVPITESRSYVYDNTITNEFEWSNTSSISSRASLSSLKSTLPENPNIYHVSEIAAATANFSAPRLSSSSWRCLIRHRDVVVSRRNFRQQIDLPELQRRLSLICRSHHRSFVKLLGASVSGAVIFLVYEFVPGASLADCLRNRRNPSFTDLSTWTSRMQIASDVAHGLDYIHNFSGSGSDSGFGFVHNHIKTSSIVITEDNLRAKLCHFGASDLTGEATAGEGEHSGARTVRLQGTRGYMAPEFQLTGVATKKTDVYAFGVVILELLSGEEAVKFEFDDGDGYRRISVVETARVAVEEHGGVRKWVDKRLKDSFPVKVAERMIWVGLECISDDPNGRPDMGRVSIEVSKLYLESKEWDTKMGIDVDVSVSLAPR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01953 420 Gene3D Phosphorylase Kinase; domain 1 83 176 - -
Pste4g01953 420 MobiDBLite consensus disorder prediction 13 50 - -
Pste4g01953 420 Pfam Protein kinase domain 140 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01953 420 SUPERFAMILY Protein kinase-like (PK-like) 124 389 IPR011009 -
Pste4g01953 420 ProSiteProfiles Protein kinase domain profile. 106 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01953 420 MobiDBLite consensus disorder prediction 1 50 - -
Pste4g01953 420 Gene3D Transferase(Phosphotransferase) domain 1 178 414 - -
Pste4g01953 420 PANTHER OS09G0572100 PROTEIN 1 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01953 Pste-Chr4 14485839 14487101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01953 90 408 Receptor kinase-like Gene Family AT1G51940 33.233 2.02e-45 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pste4g01953 Pkinase 4.9e-21 CL0016