Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01933 TTTCCTCATTTTTCTCTCTCTTTTTTTCCTCTCAGAATCCAAACCCTAGAAATTCCGCCTTTCCGACGAAACCCTAGATTTCTTATCCGAAATCTCTCTCTCCCGAGATAAAACCTAACACCTTCCTGGCTTCCCCATTCTCGGGATTTCGTGCCCAGATCGTAGATCCTGTTTATTTTCTCCCCCTTCCCCCGATCGGGTTTGGATTCTGAAGAAGAAAAATTCAATTTCGCATAATTCCGAGGTATTGCAGCTGCCGTGGCTAGCGCATGGGTAAGATTCTGAGAGAAACCACGAGGCCTTCCTCTAATTGTGCGTCGTCGTCTCAATCGTTGGCGCCACCGGCGACGACGACGTCGACGTCGGTGACGGAGACGGTGAGGGGTTCGCACCGGTTCAAGATCACGGGGTATTCGCTATCGAAGGGGATTGGGATTGGGAAGTACATAGCGTCGGATATATTCACGGTTGGAGGGTACGATTGGGCGATCTATTTTTACCCTGATGGGAAGAGCGCGGAGGACAATGCTACGTACGTTTCGCTCTTCATCGCGCTCGCCAGCGAAGGGACAGACGTTAGGGCGCTTTTTGAGTTGACCCTTTTGGATCAGAGTGGACATGAGAGGCACAAGGTCCATAGCCACTTTGAGAGGACCCTCGAGAGTGGACCCTACACGCTAAAATACCGTGGTAGCATGGGTTACAAGCGATTCTTTAAGAGAACAGCACTAGAGACATCAGATTACCTGAAAGATGATTGCCTTAGTGTTAATTGTAGTGTTGGTGTTGTGAAGTCACACACTGAGGGCCCTAAAATATATAAGATCCCAATTCCGCCTTCTAACATTGGTCGGCAATTTGGGAAGTTGCTAGAAAATGGTACAGGCAGTGATGTAACCTTTGAGGTGAACGGAGATTTTTTTGTTGCTCACAAATTGGTACTAGCAGCTCGCTCACCTGTTTTCAGGGCCCAATTTTTTGGTCCTATGAAAGATCAGAGTACCGATTGTATCAAAATTGAAGACATGGAGGCTCCAGCATTGCTTCATGTTATATATTGGGACTCACTACCTGACATGCAAGAGCTTAGTGGGTTGAACTCAAAATGGGCTACTACCTTGATGGCCCAGCATCTGTTAGCAGCAGCTGATCGGTATGGCTTAGAGAGACTTAGGCTGATGTGTGAAGCAAGTCTCTGTGAAGATGTTGCAATAAACACTGTTGCTACGACCCTGGCCTTGGCAGAGCAACACCATTGTTTCCAACTGAAAGCAGTGTGTCTGAAATTTGTTGCACGACCGGAAAATCTCAGAGCTGTGATGCAAACCGATGGTTTTGAGTACTTGAAGGAAAGTTGCCCATCTGTTTTGACTGAGCTTTTGGAGTATGTGGCTAGATTTACTGAGCATTCAGACTTATGCAAGCATAGGAGTGAAGCTATACTTGACGGCAGTGACATAAATGGAAGGCGGGTAAAGCAAAGACTATAATAGTATGAACACTGACAAGTTCTCTGTATAACCCTCTCCCCCTCGCATTTAAAAATTTCAGTGAGAGCCATAGATGGAGGGAGATGATAAGCATTCATAGGATTAGTGGCATTGTTTAATTTTCTTAGCTTACTTCATGTCTAGGAGATGTAAATGTAGTTGTTTTTATGCCGTTGCAGGTATGTCTCGCGTAGGAAACTGCCATAACTTTGCTCGTAAAACATGTCTTAAAAGAAAGTATTGATCACTGCTGTGTTTTTTTTCCTGTATTCTAAATATCCTCTTAAGAATTTATCTCGTCACCGCCCCCAACCCCCCAAAAAGCTGAGGTGGGGTTGAAACAGCTGGCGAGGTATTTGCCTGGATATGAATATTTTCTGGGAATAGATTCGAGATAAAATGGATGGAGGAACGAATTCAATGAGAATTGTAGTATGATAAAATTAATGGAACAGAATTGGGTGGG 1956 0.4499 MGKILRETTRPSSNCASSSQSLAPPATTTSTSVTETVRGSHRFKITGYSLSKGIGIGKYIASDIFTVGGYDWAIYFYPDGKSAEDNATYVSLFIALASEGTDVRALFELTLLDQSGHERHKVHSHFERTLESGPYTLKYRGSMGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYKIPIPPSNIGRQFGKLLENGTGSDVTFEVNGDFFVAHKLVLAARSPVFRAQFFGPMKDQSTDCIKIEDMEAPALLHVIYWDSLPDMQELSGLNSKWATTLMAQHLLAAADRYGLERLRLMCEASLCEDVAINTVATTLALAEQHHCFQLKAVCLKFVARPENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDLCKHRSEAILDGSDINGRRVKQRL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01933 406 CDD MATH 39 171 IPR002083 GO:0005515
Pste4g01933 406 Pfam BTB/POZ domain 198 311 IPR000210 GO:0005515
Pste4g01933 406 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 28 371 IPR045005 GO:0016567
Pste4g01933 406 MobiDBLite consensus disorder prediction 1 34 - -
Pste4g01933 406 SUPERFAMILY TRAF domain-like 35 173 - -
Pste4g01933 406 MobiDBLite consensus disorder prediction 7 34 - -
Pste4g01933 406 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 37 176 IPR008974 GO:0005515
Pste4g01933 406 ProSiteProfiles BTB domain profile. 207 264 IPR000210 GO:0005515
Pste4g01933 406 FunFam BTB-POZ and math domain 1 183 307 - -
Pste4g01933 406 SMART math_3 43 154 IPR002083 GO:0005515
Pste4g01933 406 Gene3D Potassium Channel Kv1.1; Chain A 183 307 IPR011333 -
Pste4g01933 406 Gene3D - 313 388 - -
Pste4g01933 406 SUPERFAMILY POZ domain 184 311 IPR011333 -
Pste4g01933 406 SMART BTB_4 207 313 IPR000210 GO:0005515
Pste4g01933 406 ProSiteProfiles MATH/TRAF domain profile. 38 171 IPR002083 GO:0005515
Pste4g01933 406 CDD BTB_POZ_BPM_plant 193 310 - -
Pste4g01933 406 CDD BACK_AtBPM-like 310 373 IPR034090 -
Pste4g01933 406 FunFam BTB-POZ and math domain 1 313 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01933 Pste-Chr4 14386298 14391137 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01933 4 14386298 14391137 Pste4g01933 4 14386298 14391137 ECH
Pste5g00778 5 4967265 4971005 Pste4g01933 4 14386298 14391137 PCT