Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01926 AACCCTAAATGTGATAAGAGTTCTCCCTAATTCTTCAATTATCGTGTGATATCACTGTCACCATGAACAAATCCGAATCCTCCGAAGCAGCATCCCCATTTTCCAGATCCAAGAAACCCAACCTTCGAAGCTCAAAAGCTCGATCTCCAAATCCACTTCATTTTACCTCCAAGACACCGGAGAAGCCGCCGCAGAGAACCCGCAACCGCGGCGTCGCGCTCTCCGTCGATGAAATCAGAAAGGTTGGCAAGCGCTTGCAGGATCGGAAGCAGCGCAGCGAAACGGCGTCGTCGTCGTCGCCGCTCAGCAAAAGTGTGAGGAGACAGATCCAACTCTGGCCTTCTTCTCCTTCTCCCAGTAAACCCTACATCAGTGATGATGAATCCTCCAAGCTTCCCCAAAAATATGAAATGTTAGATGAGTTCTTTAATCGCTTGGATACTTTGATTTCAATGCACCATCTGAAAAGGTGGACTCCCACCTTTACTTCAATCAGTGCCAGGATTGAATCTTTAACTGACAGGAGGTTTACTCATGGTCATCTTGCCCAGTTGAAATTTATCTTGCCTGAGGCTATTGTTCTTAAAAAACATCTTGTGCTTGATGAAAGGACCAGTTGTATGAAGCCAGATATTCACATTTCTTTGAATCCTGGTGCGGTAGATGTTGATGTGGATTTGCCCCCTCAACGTGGGAGAGTGTCCCTCAAGAAATTGTTTCGGGCACGACTAAAAGATTTTTGGGAATCCCATCCTGAGGGTGATGACATTCCAGAAGGAACCTTGCCTGAGCCATTCAATTGTCAGAAGAAAGAGAGTATTTTGGACATGTTGGAAAATCGTCTCCCAACAAAGTTGTCACCCTGCATGAGCTATAATAATGTTGTCAAAAACGAAGAATTTGCTAAAATTGATGAAAAATTGCCCAACATGGCTCCATCCTTTAGAGCTCCATTTAAACAGAATGAAGTAGATGATGTACAGCAAAAGTCTCCATTAGACTCATTACAACCCCTGACTTTTCGAGCTTCAGAGTCAAGCCTGAGGGAAAATTCGCCCCATGTGAAAACTTCCCCTCCTGTATTGAGTTCAGAAGCAGCTAGTGCTACCCCTGTTACTCCAAGCAAAACCATTAAGTACACGGAAAACAAAGATGATGAGCCTCTCAAGAGCACTGAGGTCCTTTCAACTCCAGCTAAACTTGTCTCTACTCCAACTAGGTTGAGCACTGAGGTCCTTTCAACTCCAGCTAAACTTGTCTCTACTCCGACTAGGTTGATGAGTGCCACTCCTGCCTTGCTTTCAACCAAAAGACTTTATATGAGCCCAGATGACCACTCTACCAGATCTTTGAGCAAGTTAGCTAGGCGTCCACCTCGCTCAAGATCATTGAAATTTGACACTCCCCTGAAGGAGAACGTTGTGAGTGAAGACAATGCTGGTGACTTATTTATAGATAATGATATTCTTGACATACTCCCAGAAAATCTTATCCAATCGATTAGAAACAAGGAAAGAATGGCATTGGAGGAAAGAGACCCAGCTATCACACAAGCAAAGAAACGTAAAAAAAATATAGCTAGTCTCCCTAAGCTCTTTGACATGATTCGCTCCTTGCTTCCACAACGGAATTGTATCACAAAAGAGGAGCTTGTAAGCAAGATAATCACAAGCCGCTGTGATATCGTTGACAGAAGTGAAATTCAGGAGCAGCTAGATTTGTTGCAAGAACTAGCACCAGAATGGATTTCTGAGAAGCAGGTCTCTAGTGGGGATTTGCTAGTATTGTAAGTTTTTTTTTTGGTTTAAGCGTGTTCTCTATTTTAAATTCTCTATTTTAACAATGTACAACTTTTTCCATTGTTTTTTTTAAGCATAAACAAAAAGTTGAGTCCTGGAACCATTCGAGCATCTTTGGAAGAAGCAGTGTAGTGAGTAGGGAGACAGACTTGTTAAGGCCCATGATGTGATGTGTTGTACAGTATTTTTCAGCAGTGTACAGTCGGAGATAAAAAAAAATTTACAAATTTTAAAAAAATTATTATCCATA 2049 0.4226 MNKSESSEAASPFSRSKKPNLRSSKARSPNPLHFTSKTPEKPPQRTRNRGVALSVDEIRKVGKRLQDRKQRSETASSSSPLSKSVRRQIQLWPSSPSPSKPYISDDESSKLPQKYEMLDEFFNRLDTLISMHHLKRWTPTFTSISARIESLTDRRFTHGHLAQLKFILPEAIVLKKHLVLDERTSCMKPDIHISLNPGAVDVDVDLPPQRGRVSLKKLFRARLKDFWESHPEGDDIPEGTLPEPFNCQKKESILDMLENRLPTKLSPCMSYNNVVKNEEFAKIDEKLPNMAPSFRAPFKQNEVDDVQQKSPLDSLQPLTFRASESSLRENSPHVKTSPPVLSSEAASATPVTPSKTIKYTENKDDEPLKSTEVLSTPAKLVSTPTRLSTEVLSTPAKLVSTPTRLMSATPALLSTKRLYMSPDDHSTRSLSKLARRPPRSRSLKFDTPLKENVVSEDNAGDLFIDNDILDILPENLIQSIRNKERMALEERDPAITQAKKRKKNIASLPKLFDMIRSLLPQRNCITKEELVSKIITSRCDIVDRSEIQEQLDLLQELAPEWISEKQVSSGDLLVL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01926 575 SMART CDT1_2 111 243 IPR014939 -
Pste4g01926 575 MobiDBLite consensus disorder prediction 323 364 - -
Pste4g01926 575 PANTHER DNA REPLICATION FACTOR CDT1 13 574 IPR045173 GO:0003677|GO:0030174|GO:0071163
Pste4g01926 575 Pfam DNA replication factor CDT1 like 111 197 IPR014939 -
Pste4g01926 575 Pfam DNA replication factor Cdt1 C-terminal domain 475 567 IPR032054 -
Pste4g01926 575 CDD Cdt1_m 104 246 IPR014939 -
Pste4g01926 575 MobiDBLite consensus disorder prediction 1 108 - -
Pste4g01926 575 MobiDBLite consensus disorder prediction 1 41 - -
Pste4g01926 575 MobiDBLite consensus disorder prediction 72 106 - -
Pste4g01926 575 MobiDBLite consensus disorder prediction 421 442 - -
Pste4g01926 575 Gene3D - 465 575 IPR038090 -
Pste4g01926 575 MobiDBLite consensus disorder prediction 323 357 - -
Pste4g01926 575 SUPERFAMILY "Winged helix" DNA-binding domain 108 245 IPR036390 -
Pste4g01926 575 CDD Cdt1_c 466 575 IPR032054 -
Pste4g01926 575 MobiDBLite consensus disorder prediction 52 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01926 Pste-Chr4 14361387 14364252 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01926 24 574 Core DNA Replication Machinery Family AT2G31270 38.947 2.66e-83 269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01926 4 14361387 14364252 Pste4g01926 4 14361387 14364252 ECH