Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01916 CATGAATCGAACACACTCAGCAATCCTAAATTTTTGGTTACAGAAGTTTTGAATATAAGGAGCAAGAATGACGCGAGCAACCAAAGGCTAAGAAGAAGAGTAGAAGATTCCTAATGATACAGGATTTGTTCTGCTCCGCTTCTGCTATTCTCTCTAGGGTTTCCTTTCCCGCCAAAATTGACCTCCCTCAAACCCTAACCGCACATTCCAGCTAGGGTTTCAGTTTTGCTCCGACCATGCCGTCGCTACTCTCTCCGGGCAAAATCCACTGTCTGGAGGTGGAGAATTTCAAGTCCTACAAGGGCTTCCAAGTGATCGGTCCCTTCTACGACTTCACCGCCATCATCGGCCCCAACGGCTCCGGCAAGTCCAACCTCATGGACGCCATAAGCTTCGTCCTCGGCATCCGCACCGGCCAGCTCCGCGGCGCGCAGCTCAAGGACCTCATCTATGCCTTCGACGACCGCGAGAAGGAGCAGAAAGGTCGCAGAGCCTTCGTCCGCCTCGTCTACCACCTCGCCAACTCCACCGAGATCAAGTTCACTCGCACCATCACCAGCGCCGGCGCCAGCGAGTACCGCATCGACGACTCCCTCGTTAATTGGGACACCTACAACAACAGACTCAAGTCCCTCGGCATTCTCGTCAAAGCTCGCAATTTCTTGGTCTTTCAGGGTGACGTGGAGTCCATTGCGTCAAAAAATCCCAAAGAACTCACTGCACTGGTGGAGCAGATATCCAGCTCTGACGAGTGCAAGAGGGACTATGAGCAGTTTGAGGAGGAAAAAGGTGCTGCTGAGGAAAAATCAGCGCTTGCTTATCAGAAAAAGAAGACAGTGGTTATGGAGAGAAAGCAGAAGAAAGAACAAAAGGAAGAAGCGGAAAAGCATCTCCGCCTGCAACAAGAATTGGTACCGCGATCTGTTTCAATTTATGTTTGCTTTCAAGTGGTGTGTAGGTAA 962 0.5083 MPSLLSPGKIHCLEVENFKSYKGFQVIGPFYDFTAIIGPNGSGKSNLMDAISFVLGIRTGQLRGAQLKDLIYAFDDREKEQKGRRAFVRLVYHLANSTEIKFTRTITSAGASEYRIDDSLVNWDTYNNRLKSLGILVKARNFLVFQGDVESIASKNPKELTALVEQISSSDECKRDYEQFEEEKGAAEEKSALAYQKKKTVVMERKQKKEQKEEAEKHLRLQQELVPRSVSIYVCFQVVCR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01916 241 Gene3D - 8 234 IPR027417 -
Pste4g01916 241 Coils Coil 170 190 - -
Pste4g01916 241 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 10 225 - -
Pste4g01916 241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 223 IPR027417 -
Pste4g01916 241 Coils Coil 198 225 - -
Pste4g01916 241 CDD ABC_SMC1_euk 10 157 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Pste4g01916 241 FunFam Structural maintenance of chromosomes 1A 9 224 - -
Pste4g01916 241 Pfam RecF/RecN/SMC N terminal domain 10 137 IPR003395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01916 Pste-Chr4 14331079 14333189 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01916 8 114 Structural Maintenance of Chromosomes family AT5G61460 33.333 1.07e-07 50.4