Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01902 ATGGGGTGCCAGCCATTGGAAAAGGCAAAGCCAAAACATAAGAAGGGGTTATGGTCACCCGAAGAAGACAATAAGCTCAGAAACTACATCCTTAAGCATGGTCATGGCTGTTGGAGTTCTATCCCCATTAAGGCAGGCTTGCAAAGGAATGGAAAGAGCTGTAGATTAAGGTGGATTAACTATCTAAGGCCAGGATTAAAGAGAGGGAAGTTCAACAAACAAGAAGAGGAGACAATCCTCACCCTTCACCACATGCTGGGCAACAAGTGGTCACAGATATCACAGCATTTGCCAGGAAGGACAGACAATGAGATAAAAAATTACTGGCATTCATATTTGAAAAAGAAAGTGGTGAAAGCTACGGAATTGGTATCTCATAACCAAATTAAGAATGCTAGCTCAAGCTCAGATACCATATACTCTTCAAATTCTCTCCAAAAACTTGCTACCCAAGGCCCAGACAATCATATCTTCAACAAAGAGGCCTGTCAAAGCTCCTTACCAAAACTATTATTTGCTGAGTGGCTTTCACTGGATTATATAAACTCTGCAAATTCGGTTGACTCTTTGGGTTTGAGGAATGGATTTGATGAAAATTCAACTTTGCAGGAAGCTACAATTCATGATATGTCAGATGTACCCTTTGGAGGAGAGTATCATAGATGTGTAGCTAACATTTCAGCCCCTGAGATGTTCAATTCACAGCTAAAGTTTGCAAATCAAATGGTGGAAAATGGTTTCATCCATTGTTTGCCTGGGATTGACATAAGTAGCAATTTCAGCATGAGCAATGATGCAATGATGTACATATGA 813 0.4034 MGCQPLEKAKPKHKKGLWSPEEDNKLRNYILKHGHGCWSSIPIKAGLQRNGKSCRLRWINYLRPGLKRGKFNKQEEETILTLHHMLGNKWSQISQHLPGRTDNEIKNYWHSYLKKKVVKATELVSHNQIKNASSSSDTIYSSNSLQKLATQGPDNHIFNKEACQSSLPKLLFAEWLSLDYINSANSVDSLGLRNGFDENSTLQEATIHDMSDVPFGGEYHRCVANISAPEMFNSQLKFANQMVENGFIHCLPGIDISSNFSMSNDAMMYI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01902 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Pste4g01902 270 FunFam MYB transcription factor 12 68 - -
Pste4g01902 270 FunFam MYB transcription factor 70 141 - -
Pste4g01902 270 CDD SANT 18 62 IPR001005 -
Pste4g01902 270 Gene3D - 15 67 - -
Pste4g01902 270 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Pste4g01902 270 Gene3D - 70 140 - -
Pste4g01902 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pste4g01902 270 CDD SANT 70 113 IPR001005 -
Pste4g01902 270 PANTHER MYB DOMAIN PROTEIN 55 7 182 - -
Pste4g01902 270 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Pste4g01902 270 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Pste4g01902 270 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pste4g01902 270 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Pste4g01902 270 SMART sant 14 64 IPR001005 -
Pste4g01902 270 SMART sant 67 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01902 Pste-Chr4 14226216 14229028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01902 8 176 MYB Transcription Factor Family AT3G48920 57.143 5.96e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste4g01902 Myb_DNA-binding 9.2e-13 CL0123