Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01899 ATGGAAGGAGGAAGATCATCATGCTCAAATGGTGAGGTTCGGTATAGAGGGATCCGAAGAAGGCCATGGGGGAAGTTTGCTGCGGAAATTCGTGACCCTACAAGGAAAGGGACTCGGATTTGGCTTGGAACATTTGACACTGCAGAAGAAGCTGCACGAGCTTATGATGCTGCTGCTTTCCATTTTCGTGGCCACAGAGCCATTCTCAATTTCCCAAATGAGTACCAATCTTCTAATCCAAACTCTTCTTTGCCTATGCCTCTAACTGTGCCTCCTTCTTCTTCCTCTGCTTCTTCCAATTCTTACTCCTGTGATCATAGCCTTGCCACACCCAGTTATTCTGGAGAATTTATGCAAGGTGATGATACTTTTGAGTTGGAGTATTTGGACAATAAGTTGCTTGAGGAACTCCTTCAGATGCAAGAAAATAGACATCTCTACAAGTGA 447 0.4452 MEGGRSSCSNGEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEEAARAYDAAAFHFRGHRAILNFPNEYQSSNPNSSLPMPLTVPPSSSSASSNSYSCDHSLATPSYSGEFMQGDDTFELEYLDNKLLEELLQMQENRHLYK 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01899 148 FunFam Ethylene-responsive transcription factor 2 13 73 - -
Pste4g01899 148 Gene3D AP2/ERF domain 13 73 IPR036955 GO:0003700|GO:0006355
Pste4g01899 148 CDD AP2 14 73 IPR001471 GO:0003700|GO:0006355
Pste4g01899 148 SUPERFAMILY DNA-binding domain 14 73 IPR016177 GO:0003677
Pste4g01899 148 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Pste4g01899 148 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Pste4g01899 148 SMART rav1_2 14 78 IPR001471 GO:0003700|GO:0006355
Pste4g01899 148 PANTHER DNA-BINDING DOMAIN 13 139 IPR044808 GO:0003700|GO:0009873
Pste4g01899 148 MobiDBLite consensus disorder prediction 73 101 - -
Pste4g01899 148 Pfam AP2 domain 14 65 IPR001471 GO:0003700|GO:0006355
Pste4g01899 148 ProSiteProfiles AP2/ERF domain profile. 14 72 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01899 Pste-Chr4 14167842 14168288 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01899 9 145 AP2-EREBP Transcription Factor Family AT3G23230 53.285 1.21e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste4g01899 AP2 2.9e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01899 4 14167842 14168288 Pste4g01899 4 14167842 14168288 ECH
Pste4g01899 4 14167842 14168288 Pste5g01209 5 7818923 7829777 PCT