Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01885 ATGGAGGAGTCTAAGGAGAAAGAAAAGGATACTAAGGAAGAGCCCCGGTACAGAGGGGTGCGGCGGCGGCCGTGGGGAAAGTTTGCAGCCGAGATTCGGGACTCGGCCCGGCACGGGGCCCGAGTCTGGCTGGGAACATTCCTCACGGCCGAGGAGGCTGCAAGGGCCTATGACCGTGCTGCCTATGAGATGAGGGGTGTGTTAGCTGTTCTCAATTTTCCAAATGAGTATCCTTCTTGCTCTTCTTCCAACTCCTCTTCATCATTTGCACCTTCTTCATCTTCCACCTCTTCATCTTCAACGGTTAAACATGACCATGGGAAACAAGTTATTGAGTTTGAATGCTTGGATGACAAATTGTTAGAGGACCTTCTTGATTTTGATGACTATTCCCACGACAAAGACTTGCCTAAGAGTTGA 420 0.5 MEESKEKEKDTKEEPRYRGVRRRPWGKFAAEIRDSARHGARVWLGTFLTAEEAARAYDRAAYEMRGVLAVLNFPNEYPSCSSSNSSSSFAPSSSSTSSSSTVKHDHGKQVIEFECLDDKLLEDLLDFDDYSHDKDLPKS 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01885 139 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Pste4g01885 139 MobiDBLite consensus disorder prediction 1 20 - -
Pste4g01885 139 MobiDBLite consensus disorder prediction 78 105 - -
Pste4g01885 139 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Pste4g01885 139 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Pste4g01885 139 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Pste4g01885 139 FunFam Ethylene-responsive transcription factor 2 16 75 - -
Pste4g01885 139 Pfam AP2 domain 15 66 IPR001471 GO:0003700|GO:0006355
Pste4g01885 139 Gene3D AP2/ERF domain 16 75 IPR036955 GO:0003700|GO:0006355
Pste4g01885 139 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Pste4g01885 139 MobiDBLite consensus disorder prediction 78 104 - -
Pste4g01885 139 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Pste4g01885 139 PANTHER DNA-BINDING DOMAIN 6 126 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01885 Pste-Chr4 13995296 13995715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01885 13 126 AP2-EREBP Transcription Factor Family AT3G23230 61.864 7.36e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste4g01885 AP2 3.4e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01213 5 7877291 7877875 Pste4g01885 4 13995296 13995715 PCT