Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01874 CAAAAAGTTAAGCGTAACAAGAAATCCAAAACTGAAAAGTTGCTTGGCAAAAGTGACAGTGACAATTTCAGTTCAATGCAAAATTCATCTTCCTTCTCCTATCCAACTCAAAGAAAAATGGAAGGCCCCAGTGAGATGGGTCTCATTGGGGAAAATTTTGATGCCAGTTTGATGGGAAGGATGAGGGACGATGAGTATGAAAGCCGTTCTGGAAGTGATAACTTTGAAGGCGTATCTGGTGATGATCAGGATGGCGGTGATGATCAACCACAGAGGAAGAAGAGATACCACAGACACACCCCTCACCAAATTCAAGAGCTTGAAGCTTTCTTCAAGGAGTGTCCTCATCCTGATGAGAAGCAAAGGTTGGATCTCAGTAAGAGGCTTGGCTTGGAGAATAAGCAAGTCAAGTTCTGGTTTCAGAATCGACGAACCCAAATGAAGACCCAACTGGAACGCCATGAGAACATAATGCTCAGGCAGGAAAATGATAAGCTCAGAGCCGAGAACAGTTTGATGAAGGAAGCCATGTCAAATCCAGTGTGTAACAACTGTGGCGGCCCAGCTATTCCTGGACAAATTTCATTCGAGGAGCACCAGATTAGAATTGAGAATGCTCGACTGAAGGATGAATTGAACCGTATATGTGCCTTAGCAAACAAGTTCCTGGGCAAGCCAATCTCATCATTGACCAGTCCCATGGCTCTACCGACCTCAAATTCTGGTCTAGAACTTGGTATTGGAAGGAATGGTATTGGTGGTTCAAACACTCTTGGCACTCCTTTGCATATGGGACTTGATTTGGGAGATGGAGTGTTGGGCACTCAACCTGCAATGCCTGGGATTAGACCCCCCTTGGGATTGATGGGAAATGAAGTTCAGCTAGAGAGATCTATGCTTATAGATCTTGCATTAGCTGCTATGGAGGAATTGTTGAAGATGACTCAGGCAGAGAGCCCTCTTTGGATTAAGAGTTTGGATGGAGAGAAGGAAATATTTAACCATGAAGAGTATGCAAGGTTTTCTCCTTGTATTGGTTCAAAGCCCACTGGTTATGTAACAGAAGCTACAAGAGAAACTGGGATAGTAATCATCAACAGTTTAGCCCTTGTGGAGACTTTGATGGACGCGAATCGATGGGCAGAGATGTTTCCGTCTATGATTGCTAGAGCTATCAACCTCGATGTTATATCTAATGGCATGGGTGGAACAAGAAATGGTGCTCTACAAGTGATGCATGCCGAGGTTCAATTGCTTTCACCACTAGTCCCCGTTCGTCAAGTAAGATTCATCCGGTTCTGTAAGCAGCATGCAGAAGGTGTGTGGGCTGTGGTTGATGTTTCTATTGAGATTGGTCAGGATGCTGCTAATGCACAGCCATTCATGAGCTGTAGGAGGCTTCCTTCTGGCTGTATTGTGCAGGACATGCCCAATGGTTACTCCAAGGTTACTTGGCTGGAGCATTGGGAGTATGATGAGAGTGTTGTCCACCAACTGTATCGGACATTGGTTAGTTCTGGTGTTGGATTTGGTGCTCATAGATGGATTGCCACTCTACAAAGGCAGTGTGAATGCCTGGCTATCCTCATGTCCTCTTCCATTTCAAGTGATGATCACACAGCATTGAGCCAAGCTGGTCGGAGAAGCATGTTGAAATTGGCACAACGCATGACCAGTAACTTCTGTTCCGGGGTTTGTGCTTCCTCCGCTCGAAAGTGGGACAGCCTTCACATAGGGACTCTTGGTGATGACATGAAAGTGATGACAAGGAAAAACGTGGATGACCCTGGTGAGCCTCCTGGGATCGTGCTCAGTGCTGCAACATCTGTTTGGATGCCAGTGTCACGGCAAAGACTGTTTGACTTTCTGCGCGATGAAAGGCTGAGAAGTGAGTGGGACATTTTGTCCAATGGTGGACCAATGCAGGAGATGGTCCACATTGCCAAAGGACAAGGACATGGCAACTGTGTTTCTCTACTTCGTGCTAATGCTGTTAATGCCAACGATAGCAGCATGCTGATTCTGCAAGAAACATGGATGGATGCGTCATGCTCAGTGGTGGTGTATGCACCAGTTGACGTGCAATCATTGAACGTGGTGATGAGTGGGGGAGATTCTGCATACGTGGCACTCTTGCCTTCAGGTTTTGCCATTCTCCCTGATGGTCATTGCAACAACAACGGTTGCAATGGTACTTTGCAAAAGGGTGGTAACAACGAAGATGGGGGTGGAAGCCTTCTCACAGTTGGGTTCCAAATTCTGGTGAATAGTCTCCCAACAGCAAAGCTGACAGTGGAGTCAGTGGATACTGTGAATAACCTCATCTCCTGCACCATTCAGAAGATCAAAGGTGCTCTCAGAGTTGCATGACAACCATGCATGCATTAATAATGCAAGTTAAGTTACCTTGATTACTATTTTGTGTATTTTTATATAAATTTTTTCCCTAAGATGAATTTGAAGAGGGTGTATAGGATTATAATTATATAGAGCAGTGGAAGAGGCTGAGGCAAAAGGGTCGCGTAAGGAAGGTTTCGAGTCAAGAACGAACCGCGATGGAGGAACTTCAAATTGTGCTGCATGCAGTACAGTGCACTAAGGAGTGCAGGTTTTCTGGTCATAGTGGTTCGGGTATTGACTCGTCGACCTGCGAGTTAGTCTCAGTACTCTTGTGTTTCATTATAAAAATGTGCGTGTTTTACTACTTATTACGGATGCCCATCCTATACAGTTGCAAATTGCTGAACTAATGTATTCTGGAATATTTTAC 2770 0.4513 QKVKRNKKSKTEKLLGKSDSDNFSSMQNSSSFSYPTQRKMEGPSEMGLIGENFDASLMGRMRDDEYESRSGSDNFEGVSGDDQDGGDDQPQRKKRYHRHTPHQIQELEAFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENDKLRAENSLMKEAMSNPVCNNCGGPAIPGQISFEEHQIRIENARLKDELNRICALANKFLGKPISSLTSPMALPTSNSGLELGIGRNGIGGSNTLGTPLHMGLDLGDGVLGTQPAMPGIRPPLGLMGNEVQLERSMLIDLALAAMEELLKMTQAESPLWIKSLDGEKEIFNHEEYARFSPCIGSKPTGYVTEATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINLDVISNGMGGTRNGALQVMHAEVQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIEIGQDAANAQPFMSCRRLPSGCIVQDMPNGYSKVTWLEHWEYDESVVHQLYRTLVSSGVGFGAHRWIATLQRQCECLAILMSSSISSDDHTALSQAGRRSMLKLAQRMTSNFCSGVCASSARKWDSLHIGTLGDDMKVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRLFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQGHGNCVSLLRANAVNANDSSMLILQETWMDASCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGHCNNNGCNGTLQKGGNNEDGGGSLLTVGFQILVNSLPTAKLTVESVDTVNNLISCTIQKIKGALRVA 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01874 789 Pfam Homeodomain 93 148 IPR001356 GO:0003677
Pste4g01874 789 MobiDBLite consensus disorder prediction 57 71 - -
Pste4g01874 789 CDD homeodomain 92 150 IPR001356 GO:0003677
Pste4g01874 789 CDD START_ArGLABRA2_like 297 524 - -
Pste4g01874 789 ProSitePatterns 'Homeobox' domain signature. 125 148 IPR017970 GO:0000981|GO:0006355
Pste4g01874 789 SUPERFAMILY Homeodomain-like 78 150 IPR009057 -
Pste4g01874 789 Coils Coil 144 179 - -
Pste4g01874 789 Pfam START domain 303 525 IPR002913 GO:0008289
Pste4g01874 789 SUPERFAMILY Bet v1-like 295 525 - -
Pste4g01874 789 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 89 786 IPR042160 -
Pste4g01874 789 SMART START_1 302 525 IPR002913 GO:0008289
Pste4g01874 789 MobiDBLite consensus disorder prediction 1 100 - -
Pste4g01874 789 ProSiteProfiles START domain profile. 293 528 IPR002913 GO:0008289
Pste4g01874 789 FunFam Homeobox-leucine zipper protein HDG1 79 166 - -
Pste4g01874 789 MobiDBLite consensus disorder prediction 18 38 - -
Pste4g01874 789 FunFam Homeobox-leucine zipper protein GLABRA 2 302 524 - -
Pste4g01874 789 SMART HOX_1 91 154 IPR001356 GO:0003677
Pste4g01874 789 ProSiteProfiles 'Homeobox' domain profile. 90 150 IPR001356 GO:0003677
Pste4g01874 789 Gene3D - 80 166 - -
Pste4g01874 789 SUPERFAMILY Bet v1-like 553 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01874 Pste-Chr4 13909330 13914962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01874 45 786 Homeobox Transcription Factor Family AT3G61150 61.691 0.0 916
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste4g01874 START 1e-46 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00771 1 2412925 2418027 Pste4g01874 4 13909330 13914962 ECH
Pste4g01874 4 13909330 13914962 Pste4g01874 4 13909330 13914962 ECH