Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01868 GGATACTGATGAGGCGTCAGTTACTTACTTACTTACTTCCATTATAATTATAACTAAACTCATTTCACTTCTCTCTCCACCAATGACTTGACTTCACAAATGGGTTTTCTCCGCCGACTCTTCGGCGCCAAAAAACCCTCTCATTCCACCAAAAAATGGACCTTCCTCAAACCCACCCTCAGAAACAAGTCACTCCCGCCACCGCCACCGCCACCGCCACCCGCCCCTTTGATTCATCCACTCCCTTGGACGCCAACAAGCATGCCATCGCCGTCGCCGCCGCCACCGCCGCCGTTGCCGAGGCTGCTCTCGCTGCCGCCCACGCTGCCGCCGAGGTTGTCAGACTCACAAGCGCCGCCTCCACCAGACCCGCTCCTACGCCTGCCCGTCTTGCCAACTTCCGATTGCCGCAGGAGACCGCCGCCGTTAAGATACAATCGGCGTTCCGCGGTTACTTGGCAAGAAGGGCATTGAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCATTGGTGAGGGGCCACATTGTGAGAAAGCAAAGTGCTGATATGCTGAGGCGCATGCAAACATTGGTGCGACTTCAGGCCCAGGCACGTGCAAGCCGTGCACACTTGTCAGATAATACGCGTTCTTTCAAGTCTTCCCTTTCTCACTACCCTGTCCCTGAAGAACTTGAGCACCCACATCGTGCCTTCAGTACAAAATTTGATGGATCTTCTATCCTTAAGAGATGCAGTTCGAATGCCAATTTAAGGAACGTTGGATCGGAACGAGCCCGGTTTGATTCCAATTTTCTAAACCGTTGGATGGAATTAGATAACAAGTGCAGCCAAACTGGAGATGTTTCATTGAAAATTGGACTCCCTGATGATGAAAAAAGTGACAAGATTCTCGAAGTAGATACTTGGAGGCCACACTTCAAGTCCCACCACAGTAGCAGCTCCTTTCAGACAGCACACTATTATTTGAGTTCTGATTACAATAATGAGAACTTTACAGCACACGAGTCTCCATCAAAACGTTCAGGAAAGGCTCTAAATCAAAGTTTCTCATCAAGGGATGTGATGCAGCTAAGTTCTTTGAAGTTTCACAAAGGAAAAGAAGAATCAACTTCAAGAACTGCTGACAATAGCCCACAAGCATTTTCTGCCAATTCTAGAAATGGAAATGGTGGAAGGAAAGGTCCCTTTACACCTACCAGGAGTGAGTGTTCGTGGGGTTTCTTCAGTGGCTACTCGGGTCACCCCAATTACATGGCAAACACTGAATCTTTTCGAGCTAAGGTTAGATCACAAAGTGCACCAAGACAAAGGCTGGAGTTTGACAGATACGGTTCCAGTAGGAGGCCCATTCATGTGGGGCCTAATTCAGACCTGGATTCAGATTTAAGGAACAAAGTCTTACCTGCCTCTAACCAAATGAATAGAATTGGGAGTTCCAATTTAAGGTGACTTTGAGTATGTTACAAGACAAACCCCACTTTTTCCACAAAAAAGAAGACACATATTTCCACTTGTTTTGAGTTTCTTGTGTGTGGCAGCAGTTGAGAATGTAATTATTTTCTTAACATGTATTCTTGTAGTCCATACACGATTGTTCTCATGGTTGACGTTTTCAGTGTGTGGATTTGTAAATCATGACTTGGTTTGACTGTTTGCTTAGTGGAGTGCATGTTTTCAATCATAACTTACATGGGACTAGCCCCTTCATTGTGAATAAATTTAATGATGATGGATCCCAGTAATCATTTCTCGTTAGGGACAAATGCTTGGCAGTTGGCACATCATAATGTAAAGGACAAATAGTTCAGTTTTTTAAATTGAAAGGGGAAAAGGTC 1834 0.4564 MDLPQTHPQKQVTPATATATATRPFDSSTPLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSAASTRPAPTPARLANFRLPQETAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVRLQAQARASRAHLSDNTRSFKSSLSHYPVPEELEHPHRAFSTKFDGSSILKRCSSNANLRNVGSERARFDSNFLNRWMELDNKCSQTGDVSLKIGLPDDEKSDKILEVDTWRPHFKSHHSSSSFQTAHYYLSSDYNNENFTAHESPSKRSGKALNQSFSSRDVMQLSSLKFHKGKEESTSRTADNSPQAFSANSRNGNGGRKGPFTPTRSECSWGFFSGYSGHPNYMANTESFRAKVRSQSAPRQRLEFDRYGSSRRPIHVGPNSDLDSDLRNKVLPASNQMNRIGSSNLR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01868 430 MobiDBLite consensus disorder prediction 320 342 - -
Pste4g01868 430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 131 IPR027417 -
Pste4g01868 430 Pfam Protein of unknown function (DUF4005) 325 386 IPR025064 -
Pste4g01868 430 Pfam IQ calmodulin-binding motif 110 127 IPR000048 GO:0005515
Pste4g01868 430 Pfam IQ calmodulin-binding motif 89 107 IPR000048 GO:0005515
Pste4g01868 430 MobiDBLite consensus disorder prediction 380 394 - -
Pste4g01868 430 ProSiteProfiles IQ motif profile. 110 137 IPR000048 GO:0005515
Pste4g01868 430 SMART iq_5 108 129 IPR000048 GO:0005515
Pste4g01868 430 SMART iq_5 85 107 IPR000048 GO:0005515
Pste4g01868 430 MobiDBLite consensus disorder prediction 375 410 - -
Pste4g01868 430 Gene3D - 85 138 - -
Pste4g01868 430 PANTHER IQ-DOMAIN 5-RELATED 31 400 - -
Pste4g01868 430 MobiDBLite consensus disorder prediction 1 28 - -
Pste4g01868 430 MobiDBLite consensus disorder prediction 311 345 - -
Pste4g01868 430 ProSiteProfiles IQ motif profile. 86 114 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01868 Pste-Chr4 13875174 13880687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01868 31 387 IQD Protein Family AT5G62070 47.978 6.65e-55 186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01868 4 13875174 13880687 Pste4g01868 4 13875174 13880687 ECH
Pste9g01213 9 9996093 10001506 Pste4g01868 4 13875174 13880687 PCT