Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01867 AGCAATAATAGTTGTTTGTTGAAGCCGGGTGGTCAAGTAAAATAACCTCTGCAGCTTGCGTCTCTGTTCTGTTCACTGTCTCTTCCTCTGCCTTCCTCTGTTTCTCTCTGTTCCTTATTTGGATTGAAAACCACCACAGATATTTCTCTTCGCGTTACACAGCACTTCAACTTGTGTTTTACTTTTCCCCTTTGATTATATTGTATCATCCAAGTTTCCGTGTTATTCACCTTCCGAGTTTCTAAAAGGCTGTGTCGCAATATGGATGCAGAGTACTCTTTCTATTTCTGATACGTGTGTTTTTGGTCTCTTCAAAATTTGGTTTTCTCTGTCACTTTGGCTTATCCTTTGGGATTCTTTTATTCTTACACTTCAGGAAGCTTTCCTTGTCTTTCCCTTTTATTACCTAATCTATTTTCTACCTAAAAGAAAGTTTTAAGGTAGAAATTCGAAATTCCAATATTTCATTGCAAGGATACAATCGTTTTGGGCAATGTCCTTCGTCAGTTTAATAATTTTCCATCCACTCCTATTCTCCTTGCTTTGGTTACCTGGATATTCCTAAATAGGCTAATTTTTTGTTTCATGGTTTCTCTTAATTTATCATCTTTTAATTTATATTTTCATTATAGGAAAAAAGGAAAAATAAACATTTTGTTACCAGAGAAAAAACCATTTTTTCTTCCTTAAGTTATCCTTCATCATGAAATTTCTCACTTTCCTGGTGGGTTTGTGATATCTTTTCTTTTACTTGAGGGTTGCTGTGTTTGTGTGTCACAAAAAAAAAATGAAGGAAAAAGTGGATTCCCCAGTTACAGTGCTTGAGGACTATTTCCGGAGCTCAGATTCGGAATCAAGTTCATCCAAAGATCCTTCTGCCGATTCTGAGTCTCAAGACTTTTCAAAACCTGCTTCTAGGTGGCATGGATTTCTCAAATTGCTGAGGAGTGGATCAAAGAAACAAATGAACACATTGCATCCTATCAGTGTCCTCAAGCTCTCCAAAAGAATGAGCACTAGCATGAGAGAGACCATTCTCCCAAGTTGTCTCCTAGATGCAACTGCTTCCCCCTGCAGGTCCCCATGGAAGATCTTTACTCATCATGAGATACTGGTTGCAACCAATTCTTTTAGCCAAGAAAATTTGATTGGGAAGGGTGGTTATGCTGAAGTTTACAAAGGGTGTTTGACAAATGATCAGCTAGTGGCAATTAAACGGTTAACAAGAGGAACAGCTGATGAAATCATAGGAGATTTCCTATCAGAACTTGGGGTAATGGCGCATGTAAACCATCCCAATACTGCTAAACTTGTTGGTTATGGGGTAGATGGTGGAATGTATCTAGTTCTTGAATTGTCTGAAAAAGGGAGTCTGGCTTCAGTTCTTTATGGTTCCAAGCAGAAACTAGCATGGTGTATTAGGCATAAAATTGCATTAGGAATAGCGAAGGGTATATTATATCTTCATGAGGGATGTCAAAGAAGAATTATCCACAGGGATATAAAAGCTGCGAATATCTTGCTCACGGAGGACTTTGAGCCTCAGATTTGTGATTTCGGGCTAGCAAAATGGCTGCCAGAAAATTGGACTCACCACACTGTTTCAAAATTTGAAGGAACTTTCGGTTACTTAGCTCCTGAATACTTGCTGCATGGCATAGTAGACGAGAAAACGGACGTATTTGCCTTTGGGGTATTGATATTAGAATTAGTGAGTGGGCGAAGAGCACTTGACTATTCACAGCAAAGCCTTGTGTTGTGGGCGAAACCATTGCTGAAAAAGAATGATATTATGGAGCTGATTGATCCTTCACTAGCAGGTGACTTCGACTCTAGGCAAATGAATCTTATGCTCTTGGCTGCTTCTTTATGCATACAACAGTCCTCAATTCGTCGCCCCTCTATAAGCCAGGCACCATGTGACCCTTTGGTGCAGGTTGTACAGCTTCTGAATGGGAACCTTAGCTGCTTTAAGGGCGCGAAGAAAACTCGAATGCCGTTCTTCCGAAGAGTATTCCAGGAAGAGCTCCTTGATTCTGAATAG 2044 0.3973 MKEKVDSPVTVLEDYFRSSDSESSSSKDPSADSESQDFSKPASRWHGFLKLLRSGSKKQMNTLHPISVLKLSKRMSTSMRETILPSCLLDATASPCRSPWKIFTHHEILVATNSFSQENLIGKGGYAEVYKGCLTNDQLVAIKRLTRGTADEIIGDFLSELGVMAHVNHPNTAKLVGYGVDGGMYLVLELSEKGSLASVLYGSKQKLAWCIRHKIALGIAKGILYLHEGCQRRIIHRDIKAANILLTEDFEPQICDFGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLILELVSGRRALDYSQQSLVLWAKPLLKKNDIMELIDPSLAGDFDSRQMNLMLLAASLCIQQSSIRRPSISQAPCDPLVQVVQLLNGNLSCFKGAKKTRMPFFRRVFQEELLDSE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01867 418 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 192 402 - -
Pste4g01867 418 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Pste4g01867 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Pste4g01867 418 SUPERFAMILY Protein kinase-like (PK-like) 96 380 IPR011009 -
Pste4g01867 418 SMART serkin_6 115 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01867 418 Pfam Protein kinase domain 116 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01867 418 Gene3D Phosphorylase Kinase; domain 1 90 189 - -
Pste4g01867 418 ProSiteProfiles Protein kinase domain profile. 115 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01867 418 PANTHER OS08G0249100 PROTEIN 6 416 IPR046958 -
Pste4g01867 418 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 86 189 - -
Pste4g01867 418 Gene3D Transferase(Phosphotransferase) domain 1 192 387 - -
Pste4g01867 418 MobiDBLite consensus disorder prediction 14 40 - -
Pste4g01867 418 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01867 Pste-Chr4 13856391 13859997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01867 102 375 Trihelix Transcription Factor Family AT1G68690 41.053 1.14e-66 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pste4g01867 Pkinase 5.3e-42 CL0016