Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01805 GTTGATGACGGTTTTAATGAGAGCCAGCACAACTTTGAAACTGATCCCACGTGGCATACCAGTTACACCCTTCCGTTGTTACCACCAGTAATAAAAATAAAACATTCACTGGGCCCCACAACACCAACGTTAACCATACCCATCCCCTCTCTTCTTGCTGTTCCTGTCAGATCTTCTCTTCTTCTTTCCCCTTCTTATTCTCTTCTCTTTCTGCACCATTCTTCTTACTTGTCAAAGCATCAAAATAAACACAGAACAAGTTGTACCAAAGTGAAACAACCAAGTTTTTATTGCTCAATTTCACAAATGGGTGCTCCTGTTTGCTCCTTCTGCTTTTCTTTATGGAAATTCAAACGAGCAGTATGGGAAGCAGAATTAGAGAGAGAAGGCTTGGAACCAGGAGGAGTTTGCAGGAAGATAATGAAGTGTCTACGGTCGGGGGAGTCGTTGGGAGGTGGTGATGAAGTGTTTCCTTCATCTGGATCTCTTGCAAGTGCAACCAAGGACTTTTCAGCTAGTGAACATTCTTGCCTAGCTGAACACATTGATAAGAAGCCGGACAGTGGCAACATAGAAGAAGCTGAGTCATCATTACGCGAGACCAGAGCTCTGCTAGGAAGATATGAATATCAGAAAGGAAATACAGTAGCTGCTTTACATGTCTTTGAGGGAATAGATATAGGTGTTGTGACTCCTAAGATCAAAATTGCCCTTTCTAGAAGTAGAGAACGCCGAAAGAGACATTCTCAAAATCATACTGAACCACAAATGTCTATACATTCTGTTGGCTTACTATTGGAAGCTGTCTTCCTGAAAGCAAAGTCTTTGCAGGCTCTTGAAAGGTTTAAAGAGGCTGCCCAATCTTGCAAAGTTATTCTGGATATAGTGGAGTCTTCATTGCCCGAAGGCTTGCCTAATAACTTTGGAGTTGAATGTAAATTGCAGGAGACCCTGAACAAGGCAGTTGAGTTGCTTCCAGAATTATGGAAACTCGCTGATTGTCCACGTGAAGCTATTTTGTCTTATCGACGAGCACTCCTTCATGAATGGAATCTTGATGCAGAGACTATAGCAAAGATTCAGAAAGAATTTGTTGTTTTTCTTCTTTATAGTGGAGGAGAAGCAACACCCCCTACCCTTCGCTCCCAAATGGATGGCTCATTTGTACCTAGAAACAACATAGAAGAAGCTATACTTCTTTTAATGATTTTGTTAAGAAAAGTCTCTCTAAATAGAATTGAGTGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTGTCTGTTTCAGGAGATTTGACAGCCTTAGCAACTCAATTGGAAGAATTGCTTCCTGGGACTATCCATCGAAGTAAGGACTTGGTAGCTCTGGATCTTCTCAGAAAGTTGTTGAGCAGTAGAGAGGACCAACACCATGTTCCTGGTTTGTTAATGGCTTCTAAGATTTGCTGTGAGAACTTTACTTTTGCAGAAGAAGGAGTAAGCTTTGCTCGGCTAGTGCTTCAGAACTTAGATGGTATATGTAGTCAGCTAGAAAATCATGCCAATTTCATTCTTGGTGTTTCACTTTCAGCACAATCGAAATTGGCTGTTTCTGATTCTGAGAGGTTTAAGAGACAATCAGAGGCTCTTCAAGCCCTAGAAACTGCTGGCAGAATGAGAAACCCCCTTGTACTATACCATCTCAGTTTAGAATATGCAGAACAAAGGAAGTTGGATACTGCACTTTATTATGCAAAGTGCTTTCTAAAACTAGATGGTGGTTCTAATGTTAAAGGATGGTTATTGTTGGCCCGGATATTGTCGGCTCAAAAACAGTTTTTGGATGCTGAATCTATTATCAATGTTGCTTTGGATCAAACTGGAAAATGGGATCAAGGTGATTTGTTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCCAGTTAAAGAATGCCATTGAGACGTATACTCAGCTGATTGCTCTACTTCAAATTCAAAGTAAAGGTTTTGGTTCTGGGAAGAAGCTATATAAGGCATTTCATGAAAAGGTAGAAAGCAGGATGCGTAGAGACAATAGAGATCATGCAAGGAACTTGGAAGTAGAAATATGGCATGATATTGCTTATGTATATATCAATCTTTTACGGTGGCATGATGCAGAGGCTTGCCTTTCAAAATCCAAGGCCATCAAACCACTCTCTGCTTCTAGATGTCACGCAATAGGCATAATGCACGAAGCAAAGGGTCTTTACAAAGAGGCTCTAAAAGCTTTTGGTGATGCTTTGAACATTGATCCTGGCCATGTCCTTAGCTTAATCTCCACTGCTGTAGTTCTTAAACAATGCAGTGATGAATCAAATCCAGCAGTTAAAAGCTTTCTGATGGATGCACTGCGGCATGATAGATTCAGTGCTCCTGCTTGGTATCATCTTGGCCTTCTTCACAAGGCTGAGGGTACAGCATCAGCATTAGTTGAAGCTGCAGAATGTTTTCAAGCAGCACACTTTCTTGAAGAATCTGCACCTGTTGAGCCTTTCAGATGACTCATTCTATAAGGGTTGATCTACTGGTAGAAGCAAAAGAGCTAGCTTATTTCTTTAGAGATTAACTAGCTAGTAGAGATATATTGATCATGGTGTGGAAGGCTAGTTCATAAGAAGTAATAGTAATAAACAAAAGAAAAAAAAGATAGCAAACTCTACAAGCAGTTTTGTGATGCAATGATTCACGCTTGGTGTATTCATGTATAATTTTCATGTCTTCTTCAGAGTAATAAAAGAAAAGGAAAAATAAAAAATAGAGGCTTGTTTCTTGTTTAATAATTAATATTTGATTGAGTTTGATTTTCTGCTTGTAAGCTCCTATTTGAAGCATAATGAATTCTGTGGCTAAACGTGTCACTGTTGCCCTCTACTTAGATTGAGTAGACCAAAGAAGAATAATAATAAAAAGAAAAAAACTTTTGGACATAGC 2956 0.3965 VDDGFNESQHNFETDPTWHTSYTLPLLPPVIKIKHSLGPTTPTLTIPIPSLLAVPVRSSLLLSPSYSLLFLHHSSYLSKHQNKHRTSCTKVKQPSFYCSISQMGAPVCSFCFSLWKFKRAVWEAELEREGLEPGGVCRKIMKCLRSGESLGGGDEVFPSSGSLASATKDFSASEHSCLAEHIDKKPDSGNIEEAESSLRETRALLGRYEYQKGNTVAALHVFEGIDIGVVTPKIKIALSRSRERRKRHSQNHTEPQMSIHSVGLLLEAVFLKAKSLQALERFKEAAQSCKVILDIVESSLPEGLPNNFGVECKLQETLNKAVELLPELWKLADCPREAILSYRRALLHEWNLDAETIAKIQKEFVVFLLYSGGEATPPTLRSQMDGSFVPRNNIEEAILLLMILLRKVSLNRIEWDPSILDHLSFALSVSGDLTALATQLEELLPGTIHRSKDLVALDLLRKLLSSREDQHHVPGLLMASKICCENFTFAEEGVSFARLVLQNLDGICSQLENHANFILGVSLSAQSKLAVSDSERFKRQSEALQALETAGRMRNPLVLYHLSLEYAEQRKLDTALYYAKCFLKLDGGSNVKGWLLLARILSAQKQFLDAESIINVALDQTGKWDQGDLLRTKAKLQIAQGQLKNAIETYTQLIALLQIQSKGFGSGKKLYKAFHEKVESRMRRDNRDHARNLEVEIWHDIAYVYINLLRWHDAEACLSKSKAIKPLSASRCHAIGIMHEAKGLYKEALKAFGDALNIDPGHVLSLISTAVVLKQCSDESNPAVKSFLMDALRHDRFSAPAWYHLGLLHKAEGTASALVEAAECFQAAHFLEESAPVEPFR 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01805 841 SUPERFAMILY TPR-like 544 656 IPR011990 GO:0005515
Pste4g01805 841 SMART tpr_5 556 589 IPR019734 GO:0005515
Pste4g01805 841 SMART tpr_5 729 762 IPR019734 GO:0005515
Pste4g01805 841 SMART tpr_5 627 660 IPR019734 GO:0005515
Pste4g01805 841 SMART tpr_5 695 728 IPR019734 GO:0005515
Pste4g01805 841 SMART tpr_5 799 835 IPR019734 GO:0005515
Pste4g01805 841 SMART tpr_5 591 624 IPR019734 GO:0005515
Pste4g01805 841 SMART tpr_5 266 299 IPR019734 GO:0005515
Pste4g01805 841 PANTHER PROTEIN NPG1 141 841 IPR043376 -
Pste4g01805 841 SUPERFAMILY TPR-like 628 813 IPR011990 GO:0005515
Pste4g01805 841 Gene3D Tetratricopeptide repeat domain 161 691 IPR011990 GO:0005515
Pste4g01805 841 Coils Coil 191 211 - -
Pste4g01805 841 ProSiteProfiles TPR repeat profile. 729 762 IPR019734 GO:0005515
Pste4g01805 841 Gene3D Tetratricopeptide repeat domain 692 837 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01805 Pste-Chr4 13472616 13479247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01805 138 841 Calmodulin-binding Proteins AT4G28600 56.114 0.0 728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01805 4 13472616 13479247 Pste4g01805 4 13472616 13479247 ECH
Pste5g01325 5 8571798 8576860 Pste4g01805 4 13472616 13479247 PCT