Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01800 TTGCTAATGAGGATTTAGAAGCGCAGAAAGCATTCTACAGCAAGACAGAGAAACGGAAAGCGAAGAGAAGTTTAATGAGCAATGACCAAGGAGAAGATGACTACCTTTTAGCTGAGTCAAGGCAACCATTGTGGCGCAAAGTTCCAATAGCTTCAAGCCTAATCAACCCATATCGCATAGTCATAATCACACGTCTCATTATCCTAGTTTTCTTCTTCCACTTGCGCATTACAACTCCAGTGCATGATGCACTTGCTTTATGGATAATCTCTATAGTCTGTGAAATCTGGCTCGCATTTTCTTGGCTAGTTGACCAACTCCCCAAGTGGTTCCCTATTACTCGTGAGACTTACCTTGAACGTTTGTCCTTAAGGTTTGAGCATGAAGGGGAGCCAAACCTTCTAGCCCCAGTTGATATCTTTGTGACCACTGCAGACCCTTTGAAGGAACCACCTATTATAACTGCAAACACGGTTCTATCAGTCTTGTCTGTTGATTATCCTGTTGAGAAAGTTAGCTGCTATGTCTCTGATGACAGTGCTTCTATGCTTCTCTTCTATACCTTGTCAGAAACTGCAGAGTTTGCTAGAATATGGGTTCCTTTTTGTAACAAGTATAACATTGAGCCAAGGGCACCTGAGTTTTATTTCTCTCAGAAGCTTGATTACTTGGAAGATAAGGTGCATCCTACATTTGTTAAGGATCGCAGGGCCATGAAGAGAGAGTATGAAGAATTCAAGGTGAAAATTAATGAGTTGGTTGCGAAGGCTCAGAAAAAGCCAGAAGAGGGGTGGGTGATGCAAGATGGTAACCCATGGCCTGGGAACAATATTGACGATCATCCAGGAATGATTCAGGTATGTCTAGGAAGTGCAGGTGCACTAGACAAGGAAGGCAAGGAACTGGCAAGGCTTGTGTATGTTTCAAGGGAAAAACGTCCCAGCTATCAACACCACAGTAAAGCTGGTGCCATGAATGCTCTGGTTCGAGTTTCTGCTGTGCTTAGCAATGCACCTTTTGCATTGAATCTGGATTGTGACCAATACATCAACAATAGCAAGGTTCTTAGGGAGGCAATGTGTTTTTTAATGGACCCCCAACTTGGAAAGAAGTTCTGTTATGTCCAATTTCCACGAAGGTTTTATGGCGTCGATTGCAATGACAGATATGCTAATCACAACACTGTCTTCTTTGATATCAACATGAAATGCTTTGATGGGATTCAAGGTCCTGTGTATGTTGGTAGTGGATGCGTGTTCAATAGGCAGGCATTATATGGCTGTAAGCCGCCTTCTGAGGAAAGGCCAAAGATGAAGAGTTGCTGCTGGACTTCATGCTGCAGCTGTTGTTCGTCCACATCTGATGATGACGAGACTGATCAAGAGCTTGAAGACTTTAAAGAGGAAGAGGAATTACCCTTCATGTCCCTGAAAAGTTTAGAGAAACGATTTGGTCAATCACCGGTTTTCATTGCTTCTGCTTTGATGGAAGATGGTGGACTTCCAAAAGGCACCAACACCCGATTATTGATTAAGGAAGCAGTTCATGTTATAAGCTGTGACTATGAAGAGAAAACTAAATGGGGAAAAGAGATTGGGTGGTTTTATGGCTCAGTCACAGAAATCTTAACTGGGTTTAACATGCATTGTAGAGGATGGAAATCAGTGTACTGCATGCCAAAGAAAGCAGCTTTTAAGGGATCTGCTCCTATAAATCTATCAGACCGATTACACCAAGTTCTGCAATGGGCTCTGGGTTCCACTGAGATTATCTTTAGTGGCTATTGCCCTTTGTGGTATGGCTATAGCGGAAAACTGAAATGGCTGCAAAGATTGGCCTACACTAATTCCATTGTCTATCCATTGACTTCAATCCCTCTGCTGATCTACTGTACTATTCCAGCTATCTGTCTTCTGACTGGAAAGTTCATCATTCCCACACTGTCAAACCTTGCTAGCATTTGGTTAATGGCCTTATTTATCTCCATCATCTTAACCTGTGTGCTAGAGCTTCGCTGGAGTGGGGTTAGCATTCAGGACTGGTGGCGCAATGAGCAATTCTGGGTCATTGGGGGTGTTTCTGCTCACCTTTTTGCAGTATTTCAAGGTCTCCTTAAAGTTGCTGGAGTACACACTAAGTTCTCTGTGAGAGCAAAATCAGCAAACGACACTGCGTTTGGACAGCTCTACCTCTTTAAGTGGACTACTCTACTCATCCCACCAACAACTCTTGTAATCTTAAATATGCTGGGAATTGTTGCTGGAATCTCTGATGCCATTAACAATGGCTATGACTCATGGGGACCTTTCTTTGGGAAGCTTTTCTTCTCCTTGTGGGTCATTGTGCACTTATATCCTTTCCTCAAAGGTCTAATGGGAAGGCAAAACAGAACCCCTACCATTGTAGTCCTCTGGTCAATACTTGTAGCCATAGTTTTCTCAATGATTTGGGTGCGAATTGATATTTTCTTGCCCAAGAAGACAGGTCCTGCACTAAAACAATGTGGGATAAGATGC 2516 0.4297 MSNDQGEDDYLLAESRQPLWRKVPIASSLINPYRIVIITRLIILVFFFHLRITTPVHDALALWIISIVCEIWLAFSWLVDQLPKWFPITRETYLERLSLRFEHEGEPNLLAPVDIFVTTADPLKEPPIITANTVLSVLSVDYPVEKVSCYVSDDSASMLLFYTLSETAEFARIWVPFCNKYNIEPRAPEFYFSQKLDYLEDKVHPTFVKDRRAMKREYEEFKVKINELVAKAQKKPEEGWVMQDGNPWPGNNIDDHPGMIQVCLGSAGALDKEGKELARLVYVSREKRPSYQHHSKAGAMNALVRVSAVLSNAPFALNLDCDQYINNSKVLREAMCFLMDPQLGKKFCYVQFPRRFYGVDCNDRYANHNTVFFDINMKCFDGIQGPVYVGSGCVFNRQALYGCKPPSEERPKMKSCCWTSCCSCCSSTSDDDETDQELEDFKEEEELPFMSLKSLEKRFGQSPVFIASALMEDGGLPKGTNTRLLIKEAVHVISCDYEEKTKWGKEIGWFYGSVTEILTGFNMHCRGWKSVYCMPKKAAFKGSAPINLSDRLHQVLQWALGSTEIIFSGYCPLWYGYSGKLKWLQRLAYTNSIVYPLTSIPLLIYCTIPAICLLTGKFIIPTLSNLASIWLMALFISIILTCVLELRWSGVSIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVAGVHTKFSVRAKSANDTAFGQLYLFKWTTLLIPPTTLVILNMLGIVAGISDAINNGYDSWGPFFGKLFFSLWVIVHLYPFLKGLMGRQNRTPTIVVLWSILVAIVFSMIWVRIDIFLPKKTGPALKQCGIRC 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01800 814 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 16 781 - -
Pste4g01800 814 FunFam Cellulose synthase 230 404 - -
Pste4g01800 814 Pfam Cellulose synthase 113 808 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pste4g01800 814 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 220 407 IPR029044 -
Pste4g01800 814 Coils Coil 211 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01800 Pste-Chr4 13447428 13451987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01800 11 814 Cell Wall Biosynthesis AT5G17420 69.325 0.0 1207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01800 4 13447428 13451987 Pste4g01800 4 13447428 13451987 ECH