Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01788 ATGGAAGCGAATCCCAGTCACGACGGCGAAGATATTTCAGAGACGCCGCCAATGGCGGAGCCGCCGTCTCCGTCTAGGCCGTCAGCGGCAGCACCAGCACCGCAAATGAAAGAAGAGGTGATGGACGCGGAGCAAGTCGCTGACGTTTCTCTTCCAATGAGCGTTATTCCGACGCCATTGACGGTGTCAACGGCAGGGGCGAAGCGGCCGTCGAAGGACCGACACACGAAGGTGGAGGGTCGAGGGCGGAGAATCCGGATGCCGGCGACGTGTGCGGCAAGAATCTTCCAGTTGACGCGCGAGCTGGGACACAAGTCCGACGGAGAAACAATCCGGTGGTTGCTGGAGCACGCTGAGCCGGCGATCATCGAGGCCACAGGAACGGGTACCATCCCGGCGATCGCGGTTTCGGTGGGCGGCACTCTGAAGATTCCGACATCCTCGGCGGCGAGACCCGACGGAGAAGATATTCCAAAAAAACGTAGGAGGAGAGCCTCCAACAGCGAATTCATCGACGTGAACGAAAACCAGGTTTCTGTCTCTTCAGGACTGGCACCAATTGCGCAAATTACTTACGGTAGTGGTAGTGGTGGAGGTGGAATGGTTCCTCTGTGGCATGGTAACGCCTCAGGGCCTTTCTTCATGTTCCCGAATAGTTCAAACCCGCCTCAGTACTGGGCCATTCCCGCAACAGCGACCCCCTTTTTTAACGTCCAGGCCCGGCCCATTACGGGGGCCTTGGAGATGCAACATGATAACCACTCTTCCAATGGTCCTGCCGCCGCCTCTGATTCTGCCAACGCTTCCTCCTCTATCAGCTCACTCAATGTTACTACCACTGCTGCTTCTGCCTCTTCCTCTTCCTCAGCTACCACCACTCAAATGCTCAGGGATTTCTCTTTGGAAATTTATGACAAGAAAGAGCTTCAATTTTTGGGTCAACCGCCTTCATCTTGA 957 0.559 MEANPSHDGEDISETPPMAEPPSPSRPSAAAPAPQMKEEVMDAEQVADVSLPMSVIPTPLTVSTAGAKRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSAARPDGEDIPKKRRRRASNSEFIDVNENQVSVSSGLAPIAQITYGSGSGGGGMVPLWHGNASGPFFMFPNSSNPPQYWAIPATATPFFNVQARPITGALEMQHDNHSSNGPAAASDSANASSSISSLNVTTTAASASSSSSATTTQMLRDFSLEIYDKKELQFLGQPPSS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01788 318 ProSiteProfiles TCP domain profile. 71 125 IPR017887 -
Pste4g01788 318 MobiDBLite consensus disorder prediction 146 167 - -
Pste4g01788 318 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 30 294 IPR005333 GO:0003700
Pste4g01788 318 MobiDBLite consensus disorder prediction 153 167 - -
Pste4g01788 318 Pfam TCP family transcription factor 71 150 IPR017887 -
Pste4g01788 318 MobiDBLite consensus disorder prediction 62 81 - -
Pste4g01788 318 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01788 Pste-Chr4 13336418 13337374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01788 32 312 TCP Transcription Factor Family AT5G51910 52.055 5.80e-77 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste4g01788 TCP 7.9e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01788 4 13336418 13337374 Pste4g01788 4 13336418 13337374 ECH