Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01782 GTTTGTGTCTCTCACTCTCACTCTCCCTCTCCCTCCCCGCGAGAATAAAAAAATTGATCACCATTCTTAAATGCATGTAATTTTAATACTTTTCTTGTTCTCTTCTTTATTTTCTTTTCCCCTCTTTCTCATTCCCACTGCTGCTCTCGCTTCAGCGACGTCGTTTCACTGCAACAGGTTTTGACGACTGTTGGAGTATGTATTCAAGTTTCCATTGAAATCTTTGAAATTTAAGTGCGTTTTACGTTTGGGAACCTGTGGTGAAAGTAACTTTTGGCTGATTATAAATGGCGCCTAGTCAAAAAGAAAGAGCACTTGCTGCCTGTCGTGCAATGTCAAGTCTTGGAATTGATGATTCAAAAGTGAAATCAGTGTTAAAGAAACTCCTCAAAGTGTATGATAAAAATTGGGAACCTATTGAGGCAGAGAACTATAGAGTTCTAGCTGATGCTATATTTGAGGATGACGATAATATGGTGCCCGAATCAAAAAAGAAAACCCAGGCAGTCAATGCACATAACACTCATAATCCTTTGGCATCCTTTTCAAACAACCAGGAAGAAGAGACAGAGTGTGAAGAGGCTCAGATGCATATTGAAACACCCCAACCTCTGAAAAGGTTGCGATTAAGAGGCCAAGAGAGTCAACCTTTGCACCCTCTGGCTGACAGTGTTCCCAGCCCTCCGTCAAAAAGGTTTAAATTAGATGGTGCATTGCCCCAGGGTGGTTCTGCAAAGAAGTCTCAAAACAAAACAGTGTCATCTAGTGGGAACCCAAGAATTGAAGTACACTCACTTCCACCACAAGATGGCATTGTTGATAAGGGAAAGCAACCTGCCTCACCCCAATTTTCTCACAGAGGAAGAAGAATTGCATCTGAAAGATTGTCCCCGTGCAAACCATCTAATCTAATAATACCCAAGGATGAGCCTATTGATGAATCTGATTATGAGATGCCCATTGCAATGATTCCTCCTGAACCATCAAGCATAAGGGACTCATCAATGAAGAATGGTGTGGCTGGAAAGCATGGTGGCTATGTCACTGTATCGCCGTCACAATCTAGAGGAGTTAGAGATAAAGATGTTACTCCTACATCAAATGAAGAAACTTGTAATGTAGAGATAGCCTCATCAACTCTTGGAGAGATAAAACTTTCTATGAGCTGCAGCTCTGCTCGTCAAGGATCAAATTTTCATATGCCTAGTCGAGATCAACTTCTAGAAATGATGGAGGATAAATGTCTGCGTTCATATAAAATCACTGATCCAAATTTTTCTGTTGTGAAACTGTTGAGAGATATATGTGATTGTGTGTTGGAATTCAGACCTAATACAAATGATGATTCACAAGAAGGCTCTATGACAAGATCAGGTGTTGATGTGTCAAAGGAGTCACAGGCGCACAGCACGTTGAGTGTGGGAGGAAATAAAGATTTGGATGTGTTTAAAGAATCTTCAAATGGATCAATCAATGTTAACACTTCTGCTGCTTTGGATTCTCTTTCTCCTCGAAGTCCCTTTTCACATCCTCACCTGAGTGATCTGGATGATGCTGTAATGATTTCCAAGATCGATAGAACAAATGAGTGTTTACAAAGTAATGATAGAAAGGAGCTGGAAGATCCTATATCTCCAAATTCACATAGTTTGGTGGTTGTTCCACAGCATAAGCTTACAGTTGATGACATAAGGTCTTTTCATGATGTTAATGACCTAACAAAAGGAGAAGAAAATGTTCAAATTTCATGGGTGAGTGAAACTACTAATGATTTTGTGCCGCCTTTTAACTACATATCCCAAAACCTTGTTTTCCAAGATGCTTATGTCAACATTTCTCTATCACGTATTGGGGGTGAGGACTGTTGTTTTACTTGTATGGGAAATTGTGTCCTGTCTACACCCTGTGCTTGTGCAAGTAAAACTGGGGGTCAATTTGCATACTCTTCTGAAGGCCTACTCAAGGAAGAATTCTTGGAAGAGTGCATGTCTGTTTGTCGCAATCCTCAACAAAATTTCTTCTATTGCAAAAATTGCCCACTTGAAAGATCTAAGAATGATAGTTGTTTAGAACCTTGCAAAGGACACTTAAAGAGGAAGTTTATTAAAGAATGTTGGAGCAAATGTGGCTGTGGGAAACAATGTGGAAATCGGGTTATCCAGCGAGGAATAACTTGCAAGTTGCAGGTATTTTTCGCTTCAGAAGGTAAAGGATGGGGTCTTCGTACCTTAGAGGACCTGCCAAAAGGTGCATTTGTGTGTGAGTTTGTTGGAGAAATTTTATCCATTAAAGAGTTGCATGAGAGGAACATGATATGCACCAGAAATGGGAAATGTACATACCCAGTTCTATTGGATGCAAATTGGGATTCGGGAAATGTTAAGGACGAAGAAGCTCTATGCTTGGATGCAGCTTCCTTTGGCAATGTTGCTAGGTTTATTAATCACAGATGTTTTGATTCAAACTTGGTTGAGATCCCAGTTGAAGTTGAGGATCCTGGTCATTACTACTATCATTTTGCCCTTTTCACTTCCAGAAAAATAGCAGCACAGGAGGAGCTAACATGGGATTATGGAATTGACTTTGATGACAACGATCATCCAGTCAAGCTGTTCCAGTGCAGATGTGGCAGTAAATTCTGCAGGAATATGAAGAGATCAAACATGCCTGAAGCCATGATGATAGTTACGAAATATAGAGCTCCCCTTCAGTGTTGTTCTGGGGATCCATTAGATCTGCGTCAATTGCAGGATGATAAGCTTTCTCCTTTAAACCAATTTTGTTGTCTCACCATGCGGTGGATGAGTTGCAATGAGCGCCAGTCTACTACAACCGGTGCTTTTTGTTTAATTAGTGGTTGGGGGACTAGTTACTTTGTACAGATCTATGAAAACTATTATAGGCAGGCATGTGGCCTACGAAAGGAAAGAATTGCCTTTCATTTTGGTATTTATATATGCTTATTAAGAGAGTTTCAAACTTAGATAAGACCAAAATGGACGTGTCCAAAAAAAAAAAAAACGGCTAGGCAGTGTTAGTGGAACTAACGTGATTATTCTAGGTTTTAACTGCAGGGTCTGTAGGCTCTAAAATCTTTGTTAATATGTGCGGAATTTCATGCTATGAAATTTGTCTAAAG 3139 0.3998 MAPSQKERALAACRAMSSLGIDDSKVKSVLKKLLKVYDKNWEPIEAENYRVLADAIFEDDDNMVPESKKKTQAVNAHNTHNPLASFSNNQEEETECEEAQMHIETPQPLKRLRLRGQESQPLHPLADSVPSPPSKRFKLDGALPQGGSAKKSQNKTVSSSGNPRIEVHSLPPQDGIVDKGKQPASPQFSHRGRRIASERLSPCKPSNLIIPKDEPIDESDYEMPIAMIPPEPSSIRDSSMKNGVAGKHGGYVTVSPSQSRGVRDKDVTPTSNEETCNVEIASSTLGEIKLSMSCSSARQGSNFHMPSRDQLLEMMEDKCLRSYKITDPNFSVVKLLRDICDCVLEFRPNTNDDSQEGSMTRSGVDVSKESQAHSTLSVGGNKDLDVFKESSNGSINVNTSAALDSLSPRSPFSHPHLSDLDDAVMISKIDRTNECLQSNDRKELEDPISPNSHSLVVVPQHKLTVDDIRSFHDVNDLTKGEENVQISWVSETTNDFVPPFNYISQNLVFQDAYVNISLSRIGGEDCCFTCMGNCVLSTPCACASKTGGQFAYSSEGLLKEEFLEECMSVCRNPQQNFFYCKNCPLERSKNDSCLEPCKGHLKRKFIKECWSKCGCGKQCGNRVIQRGITCKLQVFFASEGKGWGLRTLEDLPKGAFVCEFVGEILSIKELHERNMICTRNGKCTYPVLLDANWDSGNVKDEEALCLDAASFGNVARFINHRCFDSNLVEIPVEVEDPGHYYYHFALFTSRKIAAQEELTWDYGIDFDDNDHPVKLFQCRCGSKFCRNMKRSNMPEAMMIVTKYRAPLQCCSGDPLDLRQLQDDKLSPLNQFCCLTMRWMSCNERQSTTTGAFCLISGWGTSYFVQIYENYYRQACGLRKERIAFHFGIYICLLREFQT 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01782 898 MobiDBLite consensus disorder prediction 350 378 - -
Pste4g01782 898 Pfam Ubiquitin-binding WIYLD domain 4 62 IPR018848 -
Pste4g01782 898 Pfam Pre-SET motif 478 622 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste4g01782 898 ProSiteProfiles Pre-SET domain profile. 526 627 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste4g01782 898 Gene3D - 1 62 IPR043017 -
Pste4g01782 898 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 793 - -
Pste4g01782 898 SMART preset_2 474 614 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste4g01782 898 SMART set_7 630 769 IPR001214 GO:0005515
Pste4g01782 898 MobiDBLite consensus disorder prediction 252 273 - -
Pste4g01782 898 Pfam SET domain 642 763 IPR001214 GO:0005515
Pste4g01782 898 ProSiteProfiles SET domain profile. 630 763 IPR001214 GO:0005515
Pste4g01782 898 Gene3D SET domain 464 789 IPR046341 -
Pste4g01782 898 SUPERFAMILY SET domain 484 786 IPR046341 -
Pste4g01782 898 MobiDBLite consensus disorder prediction 119 191 - -
Pste4g01782 898 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 820 IPR025776 -
Pste4g01782 898 MobiDBLite consensus disorder prediction 147 166 - -
Pste4g01782 898 MobiDBLite consensus disorder prediction 250 273 - -
Pste4g01782 898 CDD SET_SETDB-like 498 763 - -
Pste4g01782 898 MobiDBLite consensus disorder prediction 350 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01782 Pste-Chr4 13309822 13316983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01782 606 788 C2H2 Transcription Factor Family AT2G23740 42.328 5.92e-32 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste4g01782 Pre-SET 1.4e-13 No_clan