Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01764 CATTTTTTTGAGCATCTGCTGCAAAGTTTTCGATTCCCACACGGAACTCGCTGTTAAACAACACACGAAAAAACATAATTTGTTGCAAACAGACAACAACATTATTAGAAAGAAAACAAGAGAGACAGCATATTCTGTCTCTCTCTTCACCGTTTAGGCTACTCGCTGTTGTCATTCGTCGTGGTTTGCCATTGGTTGTTGTGGTTTCAACTTATATATCTCCCTTTAGCAATTGGACAGCTTTGATTTCAGCAACAACCCAGGTGGGGGATTTTGCTTATTTCCCCATTGGGTGTCTTATTCTATCTTCAAAATTTGATTTTCAGTGCTACCCTACTGCTAGAACGTCTTCTTCTCTTTCTTCGTGTTCCGCGTTGGTGAAATAAAAACCTCTGTTTTTTCACGCGCATTGGTTTCTCTTCGTTATTTTTTCCTGTATTCTGAGATGCCCCTTTTGTTTTCTTCGACTGGTTGTTATTCTCAATCTGTTTCTTCTTCATCAACGCACTTTTCTCGATAATGGGTGTCGCACGTTTTTTCCATGATGTCCTAGGGTTGCCCGTGTTGGAACTTGCGACAATCTGCGTGAACCTGACTTTTGTTCTGTTGTTTCTCTTTGTTGCCTCGGTGAGGCGTGTTCTTGTGTACGAGGGTGGGTTTCGATTTACTAAGGTTGGAAACAGGGGCAATGCCGGCCCAATTTGTGGTGTCATTGATGGAGAAACGCGTGGTGTTAGAATCGGTGTGGGATTCAAGTTATCAGTGCTGTCTTGTTTCTATGTTTTGTTTGTGCATGTTTTGGCGTTGGGATTTGAAGGGGGGGCTTTGATTTGGGGAGAGGCGAATGGGGAGGCTGACGTGGATTTGTCTCTTGTTGCTGTGCCTGCTGCACAGGGTTTGGCTTGGTTTGTGTTGAGCTTCTCGGCCTTGTATTGCAAGTTCAAGGGGTCAGAGAGGTTCCCATTCTTGTTGAGAGTTTGGTGGGTTTTGTCCTTTGTTATTTGCTTGTGCACTTTGTATGTTGATGGGAGAGGGTTTTGGGTGGAGGGTCCTGAACATCTGAGTTCTCGTGCTGTTTCAAATGTTGCTGTCACACCAGCTCTTGCATTCTTGTGTGTGGTTGCAATTAAGGGTGGCACTGGGATAAGAGTTTGTGGGAACTCTGATCTTCAAGAGCCATTGCTTGTTGAGGAGGAACCGGGGTGCCTAAAGGTTACTCCTTATAGAGATGCTGGACTTTTTAGTTTGGCTACTCTTTCTTGGTTGAATTCACTTCTTTCTATTGGCGCAAAGAGACCACTTGAGCTTAAGGACATTCCACTTGTTGCACCTAGAGATAGAGCCAAGACTAGTTATAAGATTTTGAATTGTAATTGGGAGAGATTGAAAGCTGGAAATGACAATCCCAATAAGCAGCCTTCCTTGGCTTGGGCGATTCTCAAGTCATTCTGGAAGGAAGCAGCTGTGAATGCGATTTTTGCTGGTGTGAATACTTTGGTGTCATATGTTGGTCCATATATGATAAGTTACTTTGTGGATTACTTGGGTGGCAAGGAGACTTTCCCCCATGAAGGATATATCCTTGCTGGTATATTCTTTGTGGCAAAGCTTGTGGAGACTGTGACAACTAGGCAGTGGTATCTAGGAGTGGATATCTTGGGCATGCATGTTAGGTCAGCTCTAACTGCAATGGTATATAGGAAGGGACTCAGACTCTCAAGCTCAGCCAAGCAGAGTCACACAAGTGGGGAGATTATCAACTATATGGCTGTTGATGTTCAGAGGGTAGGGGACTACTCTTGGTACCTTCATGACATGTGGATGCTTCCTATGCAAATTGTTCTTGCCCTTTTAATTTTGTATAAGAATGTTGGAATTGCTTCTGTTGCAACATTGATTGCCACAATCATTTCCATTGTTGTCACTGTTCCTGTGGCCAGGATACAAGAAGAATATCAGGACAAATTGATGACAGCTAAAGATGAAAGGATGAGAAAGACATCGGAATGTTTGAGGAATATGAGGATTCTCAAGCTGCAAGCTTGGGAGGACCGGTACCGGTTGAAGTTGGAGGAAATGCGTGGAGTAGAGTTCAAGTGGCTAAGGAAAGCGCTCTATTCTCAGGCTTTCATAACTTTCATGTTCTGGAGCTCCCCTATATTTGTTTCAGCTGTTACTTTTGCCACTTCCATATTGTTGGGAGGACAGTTGACTGCAGGTGGTGTTCTCTCTGCTCTAGCTACTTTCAGGATTCTGCAAGAACCTCTGAGGAACTTTCCTGACTTGGTATCAACCATAGCTCAGACAAAAGTTTCTCTTGATCGCATATCTGCTTTCCTGCAGGATGAAGAATTGCAGGAAGACGCTACTATTGTCTTGCGACATGGCATTTCTAACACGGCCATAGAAATTATGGATGGTGTCTTCTGCTGGGACTCTTCTTTGCCTAGGCCTACTCTATCAGGAATACATATGAAAGTGGAAATAGGGATGACTGTGGCTGTTTGTGGCATGGTTGGTTCTGGCAAATCAAGTTTTCTCTCTTGCATCCTTGGAGAGATTCCCAAGCTGTCTGGTGAAGTAAAATTGTGTGGTTCTGTTGCATATGTCTCTCAATCTGCTTGGATACAGTCAGGAAATATAGAAGAAAATATCCTGTTTGGAAGTCCAATGGACAAAGCAAAGTACAAGAATGTTCTTCATGCTTGTTCACTGAAAAAGGACCTGGAACTTTTTTCACATGGAGACCAAACAATTATTGGTGACAGAGGTATAAATTTGAGTGGTGGCCAGAAGCAGCGGGTTCAGCTTGCAAGAGCACTCTACCAAGAAGCTGATATTTACCTCCTTGATGATCCCTTCAGTGCAGTTGATGCCCACACTGGATCAGAATTATTTAGGGAGTATGTATTGACAGCACTAGCAGATAAAACAGTCATTTTTGTGACCCATCAAGTTGAATTTCTTCCTGCTGCTGATATGATACTGGTTTTCAAGGAAGGCCACATCATACAGGCAGGAAAATATGATAATCTTCTACAAGCAGGAACAGATTTTAAAACTCTAGTTTCAGCTCACCATGAAGCAATAGAGGCTATGGATATACCTAATCACTCAGAAGATTCAGATGAAAATGTGCCCTTGGATGAATCTGTCATGATCAGTAAGACATCCATTTCTTCTGCAAATGATATTGACTGTTTGGCAAAGGAAGTTCAAGAGGGATCATCAGATCAGAAAGCCATTAAGGAGAACAAGAAAGCAAAACGCTCAAGAAAAAAACAGCTGGTTCAGGAAGAGGAGAGGGTTAGAGGTAGAGTCAGCATGAAGGTGTACTTGTCATACATGGCTGCAGCATATAAAGGTTTATTGATTCCACTCATAATCGTTGCACAAACGTTATTTCAGTTCCTCCAGATTGCTAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACTGAGGGAGACCAGCCCAAAGTAACTCCCACAGTTCTACTTCTTGTTTACATGGCCCTTGCTTTTGGCAGCTCATGGTTCATATTTGTAAGGGCTGTTCTCGTGGCTACATTTGGTCTAGCAGCTTCACAGAAACTATTTTTCAACATGCTTAGAAGCATTTTCCATGCACCAATGTCTTTCTTTGACTCTACACCAGCTGGAAGGATCTTGAATCGGGTTTCAATTGATCAAAGTGTTGTGGATCTTGACATTCCTTTTAGACTTGGCGGGTTTGCTTCATCAACAATACAGCTTATTGGCATTGTTGCTGTAATGACAGATGTTACATGGCAAGTTTTGCTCCTAGTAGTCCCAATGGCCATTGTTTGTTTGTGGATGCAGAAATCTCCAATTATACATCTTTTTGGTGAATCAATAGCTGGAGCAGCCACCATTAGAGGTTTTGGACAAGAAAAAAGGTTCATGAAGAGGAACCTCTATCTTCTGGATTGTTTTGCACGGCCATTCTTCTGTAGTCTTGCAGCTATTGAGTGGCTCTGCCTGCGCATGGAATTACTTTCAACCTTTGTATTTGCTTTCTGCCTGGTATTACTTGTTAGTCTTCCTCACGGCAGTATTGATCCCAGCATGGCTGGACTTGCTGTAACATATGGCCTGAATTTAAATGGACGTTTATCAAGGTGGATACTTAGCTTTTGCAAACTTGAAAATAAAATTATATCCATTGAAAGAATTTATCAGTACAGCCAAATTCCTAGCGAAGCTCCAGCAATTGTTGAAGATTCTCGTCCTCCATCCTCGTGGCCTGAGAATGGGACAATCCAATTAATTGATCTGAAGGTACGTTACAAGGAAAATCTTCCTGTGGTGCTTCATGGAGTATCCTGCACATTTCCTGGTGGAAAGAAGATTGGAATTGTTGGTCGTACTGGCAGTGGCAAATCTACTTTGATTCAAGCATTATTTCGATTGATCGAACCGGATGCTGGGAGTATCCTTATAGACAACATTAATATTTCAACAGTTGGCCTTCATGACCTTAGAAGCCATTTGAGTATCATACCACAAGATCCAACCTTATTTGAAGGCACCATTCGAGGCAATCTCGATCCTCTTGAAGAACATTCTGATAAAGAGATTTGGGAGGCCCTAGATAAGTCTCAACTTGGAGAGATCATACGTGAGACAGGACGAAAGCTTGATATGCCAGTCCTGGAAAATGGAGATAATTGGAGTGTAGGACAGCGGCAACTAGTTTCTTTAGGTCGAGCTCTGCTGAAACAGTCAAAGATACTTGTGCTCGATGAAGCAACTGCATCAGTTGATACTGCTACTGATAATCTTATACAGAAGATTATTCGGAGAGAGTTTAGAGACTGCACTGTTTGCACTATTGCACATCGTATTCCTACTGTTATTGACAGTGATCTGGTGCTGGTACTAAGTGATGGTCGAGTTGCAGAGTTTGATACTCCATCCAGGCTGTTAGAGGATAAGTCGTCTATGTTTCTGAAGTTGGTGACTGAGTATTCATCTCGATCAAGTGGGATACCAGAATTTTAAATCAGATGAAAATGCATGAAATCCCTCAATGTTGGAGGTGGAAGGAGCCTGAGAACCTTCAGAGTTAGTGGCAGCAAGAGCTCGAGACATTTCAAAAGTTGAAACAGCAGTGATGCCTCAGTTGCTGCTAATGCCACTGCTGCATTAGGCACATACTGAGACTTAAAGTGAGCAGATGCACATGAGCCCTTAACGAATAAGCACTCCAGTGCGAGAAAACTAGCTTCCAGTTTGAAAGTATCATCGGTTGATTCAACCCCTTGAACAGCATTGAAGAATCCATGCATGGTTGGCTTACTTTTGTAATATGAAATAAGATTATTGGTCTTTACGGGAAAGAAAATATGGGCACCTTAATTGGTTTCAATAATGTTAAGTACGTTAACAATTTTGAGAATGAGGCATTAGGCATTTGCATGGTTAGAAAAATGTAAATTGGAACTAGTCTTTTGTATTACACGTTTCATTGTAAGCAGTGTCTTATAATCAAGTCCCT 5518 0.4223 MGVARFFHDVLGLPVLELATICVNLTFVLLFLFVASVRRVLVYEGGFRFTKVGNRGNAGPICGVIDGETRGVRIGVGFKLSVLSCFYVLFVHVLALGFEGGALIWGEANGEADVDLSLVAVPAAQGLAWFVLSFSALYCKFKGSERFPFLLRVWWVLSFVICLCTLYVDGRGFWVEGPEHLSSRAVSNVAVTPALAFLCVVAIKGGTGIRVCGNSDLQEPLLVEEEPGCLKVTPYRDAGLFSLATLSWLNSLLSIGAKRPLELKDIPLVAPRDRAKTSYKILNCNWERLKAGNDNPNKQPSLAWAILKSFWKEAAVNAIFAGVNTLVSYVGPYMISYFVDYLGGKETFPHEGYILAGIFFVAKLVETVTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSSAKQSHTSGEIINYMAVDVQRVGDYSWYLHDMWMLPMQIVLALLILYKNVGIASVATLIATIISIVVTVPVARIQEEYQDKLMTAKDERMRKTSECLRNMRILKLQAWEDRYRLKLEEMRGVEFKWLRKALYSQAFITFMFWSSPIFVSAVTFATSILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTIAQTKVSLDRISAFLQDEELQEDATIVLRHGISNTAIEIMDGVFCWDSSLPRPTLSGIHMKVEIGMTVAVCGMVGSGKSSFLSCILGEIPKLSGEVKLCGSVAYVSQSAWIQSGNIEENILFGSPMDKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQEADIYLLDDPFSAVDAHTGSELFREYVLTALADKTVIFVTHQVEFLPAADMILVFKEGHIIQAGKYDNLLQAGTDFKTLVSAHHEAIEAMDIPNHSEDSDENVPLDESVMISKTSISSANDIDCLAKEVQEGSSDQKAIKENKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYKGLLIPLIIVAQTLFQFLQIASNWWMAWANPQTEGDQPKVTPTVLLLVYMALAFGSSWFIFVRAVLVATFGLAASQKLFFNMLRSIFHAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASSTIQLIGIVAVMTDVTWQVLLLVVPMAIVCLWMQKSPIIHLFGESIAGAATIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCLVLLVSLPHGSIDPSMAGLAVTYGLNLNGRLSRWILSFCKLENKIISIERIYQYSQIPSEAPAIVEDSRPPSSWPENGTIQLIDLKVRYKENLPVVLHGVSCTFPGGKKIGIVGRTGSGKSTLIQALFRLIEPDAGSILIDNINISTVGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLEEHSDKEIWEALDKSQLGEIIRETGRKLDMPVLENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKIIRREFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPSRLLEDKSSMFLKLVTEYSSRSSGIPEF 1500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01764 1500 Gene3D - 1237 1490 IPR027417 -
Pste4g01764 1500 Pfam ABC transporter 647 781 IPR003439 GO:0005524
Pste4g01764 1500 CDD ABC_6TM_ABCC_D1 316 603 IPR044746 GO:0140359
Pste4g01764 1500 CDD ABCC_MRP_domain1 629 828 - -
Pste4g01764 1500 SMART AAA_5 656 837 IPR003593 GO:0016887
Pste4g01764 1500 SMART AAA_5 1280 1465 IPR003593 GO:0016887
Pste4g01764 1500 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 954 1207 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g01764 1500 FunFam ABC transporter C family member 10 298 611 - -
Pste4g01764 1500 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 629 852 IPR003439 GO:0005524
Pste4g01764 1500 CDD ABCC_MRP_domain2 1252 1472 - -
Pste4g01764 1500 Gene3D - 623 857 IPR027417 -
Pste4g01764 1500 ProSitePatterns ABC transporters family signature. 754 768 IPR017871 GO:0005524|GO:0016887
Pste4g01764 1500 FunFam ABC transporter C family member 3 1237 1489 - -
Pste4g01764 1500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 626 851 IPR027417 -
Pste4g01764 1500 SUPERFAMILY ABC transporter transmembrane region 951 1234 IPR036640 GO:0005524|GO:0016020
Pste4g01764 1500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1245 1484 IPR027417 -
Pste4g01764 1500 FunFam ABC transporter C family member 5 615 861 - -
Pste4g01764 1500 SUPERFAMILY ABC transporter transmembrane region 304 611 IPR036640 GO:0005524|GO:0016020
Pste4g01764 1500 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 318 595 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g01764 1500 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 236 1491 - -
Pste4g01764 1500 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1254 1488 IPR003439 GO:0005524
Pste4g01764 1500 Pfam ABC transporter transmembrane region 318 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g01764 1500 Pfam ABC transporter transmembrane region 954 1107 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g01764 1500 CDD ABC_6TM_ABCC_D2 952 1229 IPR044726 GO:0140359
Pste4g01764 1500 Pfam ABC transporter 1271 1419 IPR003439 GO:0005524
Pste4g01764 1500 Gene3D ABC transporter type 1, transmembrane domain 913 1235 IPR036640 GO:0005524|GO:0016020
Pste4g01764 1500 Gene3D ABC transporter type 1, transmembrane domain 290 612 IPR036640 GO:0005524|GO:0016020
Pste4g01764 1500 FunFam ABC transporter C family member 5 915 1235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01764 Pste-Chr4 13203322 13212042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01764 639 845 Calmodulin-binding Proteins AT2G36910 31.718 3.49e-20 95.9