Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01753 ATGGCTACCCAAGGACAAATCATTACCTGCAAAGCCGCGGTGGCCTGGGAACCCAACAAGCCATTGACCATCGAGAACGTTGAGGTGGCTCCGCCGCAGATTGGAGAGGTCCGTATCCAAATTCATTACACTGCTCTCTGTCACACCGATGCTTACACTTGGAGCGGCAAGGATCCAGAAGGTCTTTTCCCATGCATACTTGGTCACGAGGCTGCTGGGATTGTGGAAAGTGTTGGAGAAGGTGTTACAGTAGTTCAGCCAGGAGATCAGGTGATCCCTTGTTACCAGGCTGAGTGTGGAGAGTGCAAGTTTTGCAAATCAGGAAAAACTAATCTGTGTGGCAAAGTTCGAGCTGCCACTGGAGTAGGGGTCATGTTGAGCGATGGCAAGAGTCGTTTCTCTATAAATGGAAAACCCCTTTATCATTTCATGGGAACTTCCACTTTTAGTCAATACACTGTTGTTCATGATGTTAGTGTAGCTAAGATTGATCCCAAAGCCCCTTTGGAGAAAGTTTGTCTTCTTGGATGTGGTGTTCCAACTGGCCTTGGAGCTGTCTGGAACACTGCAAAGGTGGAATCAGGGTCAATCGTAGCTATTTTTGGCCTTGGAACTGTTGGGCTTGCTGTTGCAGAGGGTGCAAAAGCTGTTGGTGCATCAAGAATTATTGGAATAGATATTGATAGCAATAAGTTTCAAAGAGCAAAGAACTTTGGAGTCACCGAGTTTATTAATCCAAATGAACATGAGAAACCAATTCAGCAAGTCATAGTTGATCTCACAGATGGTGGAGTTGATTATAGTTTTGAGTGCATTGGAAATGTCTCAGTGATGAGGTCTGCTCTGGAATGCTGCCATAAGGGTTGGGGGACATCAGTCATTGTAGGCGTTGCAGCATCAGGGCAAGAAATATGCACACGACCTTTCCAATTGGTGACTGGACGTGTGTGGAAAGGAACAGCTTTTGGTGGCTTCAAGAGCCGGTCACAAGAAATCAAGGTTGATGAGTACATTACACACAATTTAACTCTTGCAGAGATCAATAAGGCATTTGACCTCATGCATGAAGGAGGATGTCTACGTTGTGTACTTGCACTGAATGTGTGA 1107 0.4562 MATQGQIITCKAAVAWEPNKPLTIENVEVAPPQIGEVRIQIHYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTVVQPGDQVIPCYQAECGECKFCKSGKTNLCGKVRAATGVGVMLSDGKSRFSINGKPLYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVPTGLGAVWNTAKVESGSIVAIFGLGTVGLAVAEGAKAVGASRIIGIDIDSNKFQRAKNFGVTEFINPNEHEKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEICTRPFQLVTGRVWKGTAFGGFKSRSQEIKVDEYITHNLTLAEINKAFDLMHEGGCLRCVLALNV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01753 368 FunFam alcohol dehydrogenase 1-like isoform X1 18 181 - -
Pste4g01753 368 CDD alcohol_DH_class_III 8 364 IPR014183 GO:0006069|GO:0008270|GO:0051903
Pste4g01753 368 Pfam Alcohol dehydrogenase GroES-like domain 35 162 IPR013154 -
Pste4g01753 368 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Pste4g01753 368 Gene3D - 13 361 - -
Pste4g01753 368 Pfam Zinc-binding dehydrogenase 206 327 IPR013149 -
Pste4g01753 368 SUPERFAMILY GroES-like 328 364 IPR011032 -
Pste4g01753 368 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 330 IPR036291 -
Pste4g01753 368 Gene3D - 182 320 - -
Pste4g01753 368 PANTHER ALCOHOL DEHYDROGENASE 5 364 - -
Pste4g01753 368 SUPERFAMILY GroES-like 3 197 IPR011032 -
Pste4g01753 368 NCBIfam S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 10 365 IPR014183 GO:0006069|GO:0008270|GO:0051903
Pste4g01753 368 FunFam S-(hydroxymethyl)glutathione dehydrogenase 182 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01753 Pste-Chr4 13129062 13133417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01753 10 332 Monolignol Biosynthesis Gene Families AT1G72680 25.610 1.44e-12 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01753 4 13129062 13133417 Pste4g01753 4 13129062 13133417 ECH