Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01737 TAAAAACACCACGGCACAACCATCACAACATTTACATGATCTGACTCCCGAAACATCCTCAATCGTAGCCTGTTTCCTCGTCTCTCCTTGCACGCACAACAGAGACCGGACCCACATCCATCATGGTCGAAACCAGACGCGGCGCCTCTTCCAAGCGGTCTCTCTCTTCACCTTCTGCGCCCAACACCAAACGATCCAAGGTGTCTGAGGATTCCTCTGTGGCTCCGGTCAACGAATCTGGGGAACCGGAGCTACGGCCCTCTGATCTGCCTGATACGGCGTCGTTGAAGGCTGTGGATGTTTGTAACGCGGTATTGCCCGACAAGACTCCTTCTGAAGCCGAGCCTTTGCTGCGACCACAGTGTGTAGGTGAAACCGCGGAGAAATCGAAGGTGGTTGGCGTCCCAAGATGCGTGAAGAAACGGTCTGCGTTGTCGTGCCCCAAGATTGCCTGGGGAAAGCTCCTCTCTCAGCGTTCTCAGAATCCTCATGTGTGCATGAGTGAAGCTATCTTCACTGTTGGTCAAGGTCGACGTTGTAATTTACGGCTTAAAGATCCCACCATTGCTAGTGTTTTGTGCAAGTTGAGCCTCATAGAGCGTGGAGGTTCATCAGGTGCATTATTGGAAATCACAGGGAGCCAAGGTTCTATTCATGTTAATGGAAGGACTTATAGAAAGAATACCCGCCTAATTTTAACTGGAGGTGATGAGGTTGTCTTTGGTTCTTCTGCCAGGTTTGCTTATATCTTTCAGCAGCTGACTAATAATAATATTAGTACAGCTGATGTACCTTCTGTGAGTATTTTGGAAGCCCAGAGTGCTCCCATAAGTGGAATGCAAGTCGAAGCCAGATCTGGAGACCCTTCTGCTGTTGCTGGAGCATCTATATTGGCCTCTTTATCTAATATTCGTAAAGAATTATCTTTAATTACACCTGCTTCTAAAACTGGCAAGAATGCACAGCAGAATACTGGCATTTCATCTCTACCTTCTGGCTGCGGGGATGATATTCCGGAGACTGAAATGAAAGATACCACCAATAATGATGAACCAGGTGGAGATTTTTCTGCTGAGAAAACTGTTCTTGCATCCTCTACCACTGTTAATGAAAATCCTAGCCTCGGTCCAGTGGAAGTCAATACCAATATTGATCTAGATGTTGGGAAGATGACTGCTGCTACATATGAGTTGAGGCCATTACTGCACATGCTTACTGGTTCATGTCCTGAATTTGATTTAAGTGGTAACCTTTCCAAGATATTGGAAGAGCAAAAGGAATTAAGAGAACTCCTTAAAAATGTTGATGCCCCAACTGTATTAGCATCAAAGAAGCGGCAAGCATTTAAGGAGAGTTTACAACAGAAAATTCTCAAAGCTGAGAATATTGATGTCTCATTTGAAACTTTCCCATATTATCTAAGTGATACAACAAAGAACCTTTTGATTGCTTCTACATTTATTCATTTGAAGTGCAATGGATTTGGAAAATATACTTCAGACCTCTCATCAGTGTCGCCACGAATACTGTTATCTGGTCCTGCAGGTTCAGAAATATATCAAGAGATTTTGTCCAAGGCACTTGTGAAGCATTTTGGTGCTAGGCTACTAATTGTGGATTCTCTTTCACTGCCTGGTAGAAGTGCCCAGACTGCCGCATTACAGCTTAAGAAACCAGCTTCTAGTGTTGATGCTGAGATTATTGGTGGATCCACACTAACTTCTCAGGCTATGCTGAAGCAAGAGGTTTCTACTGCATCATCAAAAGGCGCTACTCTTAAAAAGGGTGATCGAGTAAAATTTATTGGTAGCTTTCCTTCTACTGTCTCATCATTACCAAATTATAATTCAAGGGGACCAAGCTATGGCTCTCGGGGTAAAGTTCTCCTAGCTTTTGAAGATAACGGGTCTTCAAAAATTGGGGTTAGGTTTGATAAATCAATTCCAGATGGCAATGATCTTGGTGGCCTTTGTGAAGAAGATCGTGGGTTTTTCTGTTCTGCAAATCATTTACTACGGGTAGATGGCTCTGGTGGGGATGATCTGGATAAAGTTGCTATTAATGGAATCTTTGAGGTTGCCTCCAATCAGAGTAAAAGTGGTGCGCTTGTGTTGTTCATTAAAGACATAGAGAAGGCAATGGTTGGCAACTATGAAATATTGAAAAGTAAATTTGAAAGCTTGCCACCAAATGTTGTGATAATTGGTTCTCACACCCAATTGGATAATCGTAAGGAGAAGACACAACCTGGTGGCCTGCTGTTTACCAAGTTTGGAAGCAATCAGACAGCCCTACTTGATCTTGCTTTCCCGGATAACTTCAGTAGACTGCATGATAGGAGCAAAGAGACCCCTAAAGTTATGAAGCAACTTAATCGCCTTTTTCCTAACAAAGTGACCATACAGTTGCCTCAGGATGAGGCTTTACTTTCTGACTGGAAGCAACAATTAGACCGTGACATTGAAACTATGAAAGCTCAGTCCAATGTTGTCAGCATGCGCTTAGTTCTAAACAGAATTGGATTGGAGTGCCCTGACCTTGAGACTCTTTGCATCAAAGACCACACCCTAACAACTGAGAGTGTGGAGAAGATCATTGGATGGGCTATAAGTTACCATTTTATGAATTTATCTGAAGCTTCTATGAGAGATTCTAAGCTTGTAATATCTGCAGAAAGCATTAAGTATGGTCATAATATTCTACAGGGCATTCAAAATGAGAACAAGAATGTGAAAAAATCACTTAAGGATGTGGTTACAGAGAATGAATTCGAGAAAAAACTACTTGCTGATGTTATTCCACCAACTGATATTGGGGTCACATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAAGGAATTGGTTATGCTTCCTCTTCTGAGGCCTGAATTGTTTAGCAAAGGACAGCTGGCCAAGCCTTGCAAGGGAATATTGCTTTTTGGTCCCCCTGGCACAGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAAGCCGGGGCAAATTTTATTAACATTTCAATGTCCAGCATTACATCCAAGTGGTTTGGTGAGGGAGAGAAATATGTCAAAGCAGTCTTTTCTCTGGCCAGCAAAATTGCTCCGAGTGTTATTTTCGTTGATGAGGTTGATAGTATGTTAGGAAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAATTCATGGTTAATTGGGATGGATTGCGAACAAAAGATAAAGAGCGGATACTTGTTCTTGCTGCTACAAACAGACCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCACGAAGGTTGATGGTTAATTTGCCAGATGCTCCAAATAGAGAAAAAATTGTCAGAGTTATTTTAGCAAAAGAAGATTTGGCACCTGATGTTGATTTTGAAGCAATAGCAAATATGACTGATGGATATTCAGGGAGTGACCTAAAGAATCTGTGTGTCACAGCAGCTCACTGCCCAATAAGAGAAATCTTGGAGAAGGAAAAGAAGGAGAGAAGTTCTGCATTAGCTGATAACAAACCTTTACCTGAGTTGTCTAGCAGTTCTGACATTCGTCCCTTAAAGATGGAAGATTTTAGATATGCACATGAGCAGGTATGTGCCAGTGTGTCATCAGAGTCTAGAAATATGAATGAACTACTCCAATGGAACGACCTCTATGGAGAAGGTGGATCAAGAAAAATGAGATCTTTGAGCTATTTCATGTAAAGCTTCTTGTATAGGCATTTATTGGTTAGGCAATTCTTCTATCACCTAAGTGGTGAGTGTAACAAGGTCTGAAATGACCAGTTGATGTGAAAATCCCATTAGTAGCAATGCCTTTATTGTATCATATCTTAGGTTTTCCCCTTCCTCCAACCCTCACCATCCTCTGTTCTGCCTCCATTTTTTTATTTTTCAAAATATAATTTGTTCGACTGATAAAGCTTAATTTTATTTTAGATCTCCTTATCATCTTTTCTGGCCTTTCCTTTTTGCATTCTCCAATTTTTATAATTTCAAAATTGTCCTCAACCATTTTAAGATTGTGTCCTTTAATGTTGTGAATTTATGCATGCCCACATGTAATGTGAATCATGAGATTTGTAACATGCATGCGTACTGAATTATAACATTATGGATCATATTGTAC 4161 0.4134 MVETRRGASSKRSLSSPSAPNTKRSKVSEDSSVAPVNESGEPELRPSDLPDTASLKAVDVCNAVLPDKTPSEAEPLLRPQCVGETAEKSKVVGVPRCVKKRSALSCPKIAWGKLLSQRSQNPHVCMSEAIFTVGQGRRCNLRLKDPTIASVLCKLSLIERGGSSGALLEITGSQGSIHVNGRTYRKNTRLILTGGDEVVFGSSARFAYIFQQLTNNNISTADVPSVSILEAQSAPISGMQVEARSGDPSAVAGASILASLSNIRKELSLITPASKTGKNAQQNTGISSLPSGCGDDIPETEMKDTTNNDEPGGDFSAEKTVLASSTTVNENPSLGPVEVNTNIDLDVGKMTAATYELRPLLHMLTGSCPEFDLSGNLSKILEEQKELRELLKNVDAPTVLASKKRQAFKESLQQKILKAENIDVSFETFPYYLSDTTKNLLIASTFIHLKCNGFGKYTSDLSSVSPRILLSGPAGSEIYQEILSKALVKHFGARLLIVDSLSLPGRSAQTAALQLKKPASSVDAEIIGGSTLTSQAMLKQEVSTASSKGATLKKGDRVKFIGSFPSTVSSLPNYNSRGPSYGSRGKVLLAFEDNGSSKIGVRFDKSIPDGNDLGGLCEEDRGFFCSANHLLRVDGSGGDDLDKVAINGIFEVASNQSKSGALVLFIKDIEKAMVGNYEILKSKFESLPPNVVIIGSHTQLDNRKEKTQPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKVMKQLNRLFPNKVTIQLPQDEALLSDWKQQLDRDIETMKAQSNVVSMRLVLNRIGLECPDLETLCIKDHTLTTESVEKIIGWAISYHFMNLSEASMRDSKLVISAESIKYGHNILQGIQNENKNVKKSLKDVVTENEFEKKLLADVIPPTDIGVTFDDIGALENVKDTLKELVMLPLLRPELFSKGQLAKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKIVRVILAKEDLAPDVDFEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERSSALADNKPLPELSSSSDIRPLKMEDFRYAHEQVCASVSSESRNMNELLQWNDLYGEGGSRKMRSLSYFM 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01737 1204 MobiDBLite consensus disorder prediction 274 290 - -
Pste4g01737 1204 Gene3D - 898 1177 IPR027417 -
Pste4g01737 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 899 1178 IPR027417 -
Pste4g01737 1204 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 898 1074 - -
Pste4g01737 1204 Pfam ATPase family associated with various cellular activities (AAA) 940 1069 IPR003959 GO:0005524|GO:0016887
Pste4g01737 1204 Coils Coil 860 880 - -
Pste4g01737 1204 ProSitePatterns AAA-protein family signature. 1043 1062 IPR003960 GO:0005524|GO:0016887
Pste4g01737 1204 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 406 1203 - -
Pste4g01737 1204 MobiDBLite consensus disorder prediction 1132 1151 - -
Pste4g01737 1204 MobiDBLite consensus disorder prediction 1 51 - -
Pste4g01737 1204 Gene3D - 1072 1166 - -
Pste4g01737 1204 MobiDBLite consensus disorder prediction 274 316 - -
Pste4g01737 1204 Gene3D - 110 220 - -
Pste4g01737 1204 MobiDBLite consensus disorder prediction 8 35 - -
Pste4g01737 1204 Pfam AAA+ lid domain 1093 1128 IPR041569 -
Pste4g01737 1204 SMART AAA_5 936 1073 IPR003593 GO:0016887
Pste4g01737 1204 SUPERFAMILY SMAD/FHA domain 111 211 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01737 Pste-Chr4 13032890 13049305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01737 837 1146 Calmodulin-binding Proteins AT3G56690 30.573 1.18e-30 129