Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01731 ATCTGCCTCAATCATTCTTAGTCATAACCTGTTGTTCTCATCTTCCCCGAAAAGGACCGGCCCCAGAACCCTCCACAACCCACCATGGTCGAAACCAGACGCAGCAGCTCCTCTTCTTCCAAGCGTTCTCTCTCTTCGCCATCTGCCCCCAACAGCACCAAACGATCCAAGGTGTCCGAGGATTCCACATCCACCACCGTTCCTTCGGTTGCTCCGGTCAACGAATCTGGAACAGCAAATGAATCCGCCGAACCGGAGCTGAGGCCCTCTGATCTGCCCGATACGGCGTCGTTGAAGGCTGGTGATGGCTGTGATGCGATGTCGCCAGATAAGTCTCCCTCTGCACCGGTTGAAGGCGAGGCTTTGGTGTCCCCTCAGTGTCCAGGTGAAACGGCGGAGAAACCCAAGGGTGCTTGTGCGGCGGCCACGACAACTACTGCGGGTGGTCGGTCCAAAAAACGCCCTACCAAATTGAGCCCTAAGGCTGCTTGGGGAAAGCTCCTTTCTCAGTGTTCTCAGAATCCTCACGTATCCATGAGTGATCTTATCTTCACTGTTGGTCAAGGTCGTAATTGTAATTTATGGCTTAAAGATCACACTGTTGGTCATGTTTTGTGCAAGTTGAGCCACATAGAGCGTGGAGGCTCGTCTGTTGCATTATTAGAAATCACAGGGGGCAAGGGTTCTATTCAAGTTAATGGTCAGACCTATCGAAAGAATGCCCGTCTGATTTTAAGTGGAGGTGATGAGGTGGTCTTTGGTTCTTCTGGCAAGCATGCTTATATCTTTCAGCAGCTCACAAATAATAATATTAGTCCTGCTGGTATACCTTCGTCTGTGAGTATTTTAGAAGCCCAGAGTGCTCCAATAAATGGAACACAAGTTGAAGCTAGATCTGGTGACCCTTCTGCTGTTGCTGGAGCATCAATATTGGCCTCTTTATCTAATCTTCATAAAGATTTATCTATCCTTTCATCTCCTGCTAAAACTGGCAAGAATGTGCAACAGAATGCTGACATTTCATCACTGCCTACTGGCAATGGAGATGCTATTGTAGACAATGAAATGAAGGATACCACCAATAATGATGTACCATCTGGAGTTTTCCCTGCTGACAAAACTGTTCTTGCATCCTCTAACCCTGTTAATGAAAATCCTAACCTTGACACAGTGGAAGTCGACACCAATGTGGATGCTGATGTTGGGAAGGTGCCTCCTGGTACATATGAATTAGAGCCATTATTGCGCATGATTGCTGGCTCATGTCCTGAACTTGATATAAGTTGTGGCCTTACCAAGATAATGGAAGAACGAGTGGAATTAAGAGAGCTCCTTAAAGATGTGGATAACCCAACAATATTGGCATCAACCAAGCGGCAAGCATTTAAGGACAGTTTACTGCAGCGAATTCTCAAATCTGAGAATATTGATGTCTCTTTTGAAACTTTCCCATATTATCTAAGTGATACAACAAAGAACGTTTTGATTGCTTCTACATTTATTCATTTGAAGTGCAATGGCTTTGGAAAATATGCTTCAGACCTCCCATCAGTGTCGCCACGAATATTGTTATCTGGTCCTGCAGGTTCGGAAATATATCAGGAGACTTTGTGCAAGGCACTTGCAAAGCATTTTGGTGCCAGGCTACTGATTTTGGATTCTCTTTCATTGCCTGGTGGAGCACCATCCAAGGAAGTTGATTTGGCTAGAGAAAGTTCCAGACCTGAAAGACCATCTGTGTTTACTAAGAGAAGTTCACAGACTGCCACATTACAACATAAGAAACCAGCTTCCAGTGTTGATGCTGAAATTATAGGTGGATCCACGTTAAGTTCTCAGGCTATGCTGAAGCAAGAGGTTTCTACTGCATCATCAAAAGGCACTACTCTTAAAGAGGGTGATCGAGTAAAATTTGTCGGTAACTTCCCTTCTGCTGTCTCATCACTGCCAAATTATCCTTCAAGGGGACCAAGTTATGGCTCACGGGGCAAAGTTCTGCTTGCTTTTGAAGATAATGGATCGTCTAAAATTGGGGTTAGGTTTGATAAATCAATTCCAGATGGCAATGATCTTGGAGGCCTTTGTGAAGATGATCGTGGCTTCTTTTGTTCTGCAAATCATTTACTACGGGTAGATGGTTCTGGAGGAGATGACACGGACAAAGTTGCAATAAATGATATCTTTGAGGTTACCAATAATCAGAGTAAAAGTGGTCCACTAGTGTTGTTCATTAAAGAAATAGAGAAGGCAATGGTTGGGAGCTATGACATTTTGAAAAGTAAATTTGAAAACTTGCCACCAAATGTTGTGGTAATTGGCTCTCATACTCTACTTGACAATCGGAAGGAGAAGGCCCAACCTGGTGGCCTTCTATTTACCAAATTTGGGAGCAATCAGACCGCACTACTTGATCTTGCTTTTCCGGATAACTTTAGTAGACTGCATGATCGGAGCAAAGAAACACCTAAAGAAGAGGCTCTGCTTTCTGATTGGAAGCAGCAATTAGAACGTGATATTGAAACTATGAAAGCTCAGTCCAATATTGTCAGTGTTCGCACAAAGATCATTGGCTGGGCTATAAGTTACCATTTTATGCATTCGTCTGAAGTATCTACCAAAGATTCTAAGCTTGTGGTATCTGCAGAAAGCATTAATTATGGGCTTAACATTCTACAAGGCATTCAAAATGAGAACAAAAACTTGAAAAAATCACTGAAGGATGTGGTTACTGAGAATGAGTTTGAGAAAAAACTGCTTGGTGATGTTATTCCGCCAACTGATATTGGGGTCACATTTGATGATATTGGAGCTTTAGAAAATGTGAAGGACACCTTGAAGGAATTGGTTATGCTTCCACTTCAGAGGCCTGAATTATTTTGCAAAGGACAGTTGACAAAGCCTTGCAAGGGAATATTGCTTTTTGGTCCCCCTGGCACAGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAAGCTGGAGCAAATTTCATTAACATTTCAATGTCCAGCATTACCTCAAAGTGGTTTGGTGAAGGAGAGAAATATGTCAAAGCAGTCTTTTCTCTGGCCAGCAAAATTGCTCCAAGTGTTATCTTTGTTGATGAGGTTGATAGTATGCTAGGGAGACGTGAAAACCCTAGTGAGCATGAAGCTATGCGAAAAATGAAAAATGAGTTCATGGTTAATTGGGATGGTCTGCGTACAAAAGATAAAGAGCGTGTACTTGTTCTTGCTGCTACAAACAGGCCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCTCGACGGCTGATGGTTAATTTGCCAGATGCTCCAAACAGAGAAAAAATTCTCAGGGTTATTTTAGCGAAAGAAGATTTGGCACTTGATGTTGATTTTGAAGCAGTAGCTAATATGACTGATGGATATTCTGGGAGTGATCTAAAGAATCTTTGTGTCACAGCAGCTCACTGCCCAATACGAGAGATATTGGAGAAGGAAAAGAGGGAGAGAAGCTTAGCAATGTCAGAGAACAAACCTTTACCTGGATTATGCAGCAGCGCCGACATCCGTTCTTTAAAGATGGACGATTTTAGATATGCACATGAGCAGGTATGTGCAAGCGTGTCATCAGAGTCATCAAATATGAATGAGCTACTCCAATGGAATGACCTGTATGGGGAAGGAGGATCAAGAAAAATAAGATCTCTGAGCTATTTCATGTAAAGCACTCTCTGTATAGCATTTCTTGCTTAGGCGATTCTTCCTCACCACCTAAAATGGTACAACAAGGTCAGCAGTGACCTGTTGATGTGGAAACCCCATCATTGGTTCTGCCTCTATTGTATTATATCATAGGTTTTCTTTCCCCTTTTTCCAACCCTCACCACCCTCTCCAATTTTTTTCATATATTAGTAGAATTTGTTGACGATTTCACTTGAGAGATAAAAAGCTTAATTTAGGTTCCCTGCTGATCCAACACTCCCCCTTCCTCTATTCCTGCCCTGTTTGGGCTTTCTGCTTGTATATACTAAGGTTTTTTTTCTCGTAAAAATAAAAATAAAATAATTCTTATTTATTTTTATTAGTTTATTGTATAAACTGTGGCTGAATGCATTGTATTTCCGATTTGCAATCATCTATGGTGTGTATGAACGCTATGTAAATGAACCTTGGGCACTCATGACTCATGAGTTCGAAGATTGAGTTTATGAATGACTACCTATTTTAAGTGCA 4219 0.4221 MVETRRSSSSSSKRSLSSPSAPNSTKRSKVSEDSTSTTVPSVAPVNESGTANESAEPELRPSDLPDTASLKAGDGCDAMSPDKSPSAPVEGEALVSPQCPGETAEKPKGACAAATTTTAGGRSKKRPTKLSPKAAWGKLLSQCSQNPHVSMSDLIFTVGQGRNCNLWLKDHTVGHVLCKLSHIERGGSSVALLEITGGKGSIQVNGQTYRKNARLILSGGDEVVFGSSGKHAYIFQQLTNNNISPAGIPSSVSILEAQSAPINGTQVEARSGDPSAVAGASILASLSNLHKDLSILSSPAKTGKNVQQNADISSLPTGNGDAIVDNEMKDTTNNDVPSGVFPADKTVLASSNPVNENPNLDTVEVDTNVDADVGKVPPGTYELEPLLRMIAGSCPELDISCGLTKIMEERVELRELLKDVDNPTILASTKRQAFKDSLLQRILKSENIDVSFETFPYYLSDTTKNVLIASTFIHLKCNGFGKYASDLPSVSPRILLSGPAGSEIYQETLCKALAKHFGARLLILDSLSLPGGAPSKEVDLARESSRPERPSVFTKRSSQTATLQHKKPASSVDAEIIGGSTLSSQAMLKQEVSTASSKGTTLKEGDRVKFVGNFPSAVSSLPNYPSRGPSYGSRGKVLLAFEDNGSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLLRVDGSGGDDTDKVAINDIFEVTNNQSKSGPLVLFIKEIEKAMVGSYDILKSKFENLPPNVVVIGSHTLLDNRKEKAQPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKEEALLSDWKQQLERDIETMKAQSNIVSVRTKIIGWAISYHFMHSSEVSTKDSKLVVSAESINYGLNILQGIQNENKNLKKSLKDVVTENEFEKKLLGDVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPSEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILRVILAKEDLALDVDFEAVANMTDGYSGSDLKNLCVTAAHCPIREILEKEKRERSLAMSENKPLPGLCSSADIRSLKMDDFRYAHEQVCASVSSESSNMNELLQWNDLYGEGGSRKIRSLSYFM 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01731 1207 Pfam AAA+ lid domain 1096 1132 IPR041569 -
Pste4g01731 1207 CDD RecA-like_ATAD1 906 1072 - -
Pste4g01731 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 902 1179 IPR027417 -
Pste4g01731 1207 ProSitePatterns AAA-protein family signature. 1046 1065 IPR003960 GO:0005524|GO:0016887
Pste4g01731 1207 Pfam ATPase family associated with various cellular activities (AAA) 943 1072 IPR003959 GO:0005524|GO:0016887
Pste4g01731 1207 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 432 1206 - -
Pste4g01731 1207 MobiDBLite consensus disorder prediction 551 567 - -
Pste4g01731 1207 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 901 1077 - -
Pste4g01731 1207 Coils Coil 863 883 - -
Pste4g01731 1207 Gene3D - 1075 1169 - -
Pste4g01731 1207 Gene3D - 135 244 - -
Pste4g01731 1207 Gene3D - 901 1180 IPR027417 -
Pste4g01731 1207 MobiDBLite consensus disorder prediction 1 55 - -
Pste4g01731 1207 MobiDBLite consensus disorder prediction 535 572 - -
Pste4g01731 1207 SMART AAA_5 939 1076 IPR003593 GO:0016887
Pste4g01731 1207 MobiDBLite consensus disorder prediction 1 131 - -
Pste4g01731 1207 SUPERFAMILY SMAD/FHA domain 136 232 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01731 Pste-Chr4 12965660 12980345 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01731 902 1146 Calmodulin-binding Proteins AT3G56690 39.286 2.79e-40 160