Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste4g01728 | GAAAGATGGTGGAAGAAAGAGAGAGAAGAAAAGAAGAAAAGAAGAAAGGAAGAACACGAAGGGCTTAACCTCTTCTTCAAAAGTTTGGTGTTGTTGAAGGGTTTAAGCTTTTCAATTCAATTCAATTTCATCAGTGTATATTATAATATATACATGCAATAATACTAATAATAATAATACATCATAGTGTTTCACTCGGTAGATATAGCGTAACAATTGGTACCTTCGATTTCGTTGTTCACAATTGCGAAGATCTTTCGATTTTTTCACTGGAGCTGTAGTGCAGCGAGCTAGATCCGGAACTGCCGCGAGATTTTCGATCCGATCAAGCTATTTCAAATGGCTGCCACCACCAATCCTATAGTTGGTTCCCATGTTTGGGTGGAGGATTCTCAAGTAGCTTGGATAGATGGTGAGGTCTTGGAGGTTAAGGGGGAACAAGTCAAAGTCCTTTGCACTTCAGGGAAGACGGTGGTTGTTAAAGCTTCTAGTGTTTATCATAAAGATACCGAAGCCCCACCATGTGGAGTTGATGATATGACAAAACTTGCTTATCTACATGAACCTGGTGTCCTGGATAATCTGAGATCAAGATATGATATCAATGAAATTTATACTTACACCGGAAATATATTGATTGCTGTGAATCCTTTCATAAGGCTTCCTCATTTATATGATAGCCATATGATGGCACAATATAAAGGAGCAGTTTTTGGTGAGCTGAATCCACATCCTTTTGCTGTTGCAGATGCAGCATATAGACTTATGATTAATGAGGGAATCAGCCAGTCCATATTGGTTAGTGGTGAAAGTGGGGCTGGGAAAACAGAAAGCACCAAGTTACTCATGCGCTATCTTGCTTACATGGGAGGGAGAACTAATAGTGCTGCTGAAGGCAGAACCGTTGAGCAGAAAGTCCTGGAGTCCAATCCTGTTCTAGAAGCCTTTGGCAATGCAAAGACTGTTAGAAATAATAATTCAAGTCGATTTGGTAAGTTTGTGGAGATTCAATTTGACCAGAGGGGAAGAATTTCTGGGGCTGCTATCAGAACTTATCTGCTGGAAAGATCACGTGTTTGTCAAGTGTCAGATCCAGAGAGGAACTATCACTGTTTCTATATGCTCTGTGCTGCTCCTCCAGAGGATATTAAGAAGTATAAATTAGGAAATCCTAGAACATTTCACTATCTGAATCAATCAAATTGCTTTGAGCTGGAAGGAGTTGATGAGTTAAAAGAATATCGTGATACAAGGAGAGCAATGGATGTTGTTGGAATAAGTTCTGAGGAGCAGGAAGCAATATTTCGAGTGGTTGCTGCAATTTTGCATCTTGGAAACATTGAATTTACTAAAGGGAAGGAAATTGATTCATCTATGCCCAAAGATGAAAAATCTTGGTTCCATCTTCAAACTGCCGCTGAACTTTTCTTGTGCGATGCAAAGGCTCTTGAAGATTCTCTTTGCAAGCGTGTAATTGTTACTCGTGATGAAACTATAACAAAATGGCTGGATCCTGAATCTGCAGCACTCAGCCGAGATGCTTTGGCCAAGATTGTGTACACGAGGTTGTTTGATTGGCTGGTGGATAAAATTAATAATTCAATTGGTCAAGATCCTGACTCAAAGTCCTTAATTGGTGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATCAATTTGACTAACGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAGGAAATTGATTGGAGTTACATTGAGTTTGTTGATAATCAAGATATTCTGGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTCTTGATGAAGCTTGTATGTTTCCCAGATCAACACATGAAACTTTTGCCCAAAAGCTGTATCAGACATTCAAAAACCATAAACGGTTCAGCAAACCCAAATTGGCACGTAGTGACTTCACAATTTGCCATTATGCGGGTGATGTCACTTATCAAACGGAATTGTTCCTGGACAAGAACAAAGATTATGTTGTTGCAGAACATCAGGCTCTTCTGTATGCTTCCAAATGCCCCTTTGTGTCTGGTTTGTTCCCTCCTTCACCTGAGGAATCGTCCAAACAATCAAAGTTCTCTTCAATAGGTTCCCGGTTTAAGCAACAATTGCAAGCACTACTTGAAACTCTCAGTGCCACTGAGCCGCACTACATTCGCTGTGTTAAACCCAATAATCTTCTTAAGCCAGCAATCTTTGAGAATAAAAATGTTTTGCAACAACTGCGATGTGGGGGAGTTATGGAAGCAATTAGGATAAGCTGTGCTGGGTATCCCACTAGGAAAACTTTTGATGAATTTGCAGATCGATTTGGACTTCTTGCGCCTGAAGCCTTGAGCGGGAGTTCTGATGAGGTCACTGCTTGCAAGAGGATTCTAGAGAAGGTTGGACTTAAGGGCTATCAGATTGGTAAAACAAAAGTTTTTCTTCGATCTGGTCAAATGGCTGATCTAGATACTCGTAGAAGTGAGGTATTAGGAAAGTCAGCAAACATTATTCAGAGGAAAGTTCGTACCTTTTTGGCCCGCCGAAGTTTTGTCTCGATACGTTTATCTACTATACAGATTCAAGCTGCATGCAGAGGACAACTTGCTCGGCAAGTTTATGAGGGATTGCGTCGGGATGCTTCTAGCCTGATGATTCAGAGGTATTTCCGCATGCATGTTGCTAGGAAGGCATATAAAGAATTGTGTAGCTCGGCCATTTCTATTCAGACTGGTGTGCGAGGGATGGTTGCTCGTAGTGAGCTACGCTTCAGGAAGCAAACTAGTGCTGCTATTGTCATTCAGAGCCACTGCCGGAAATACCTTGCACAACATCATTTTACAAACTTAAAGAAGGCAGCAATTACAACACAATGTGCATGGAGAGGAAAAGTTGCTCGGCGAGAATTACGAAAGCTCAAGATGGATCAAGGAGCTATGCAGCTATGCTCTTGTTTTGGTCCAAAACAAAATTCTTTTTCAGTTCTTAAGGCTGCTAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGATCTAACATTGAGGTTGCAGCTGGAAAAACGCCTGAGGATTGACATTCAAGAATCAAAAACGCAAGAAAATGAAAAACTGCAATCTGCTTTGCAAGAGATGCAACTTCAGTTCAAAGAAACCAAGTTATTACTTCAAAAGGAGCGTGAGGCTGCAAAAAGAGAAGCTGAGAGAGCACCTGTCATACAGGAGATTCCTGTTGTTGACAATGCTTTGTTGGACAAGCTCACTAGTGAAAATGAGAAACTCAAGACCTTGGTGAGTTCATTGGAAAACAAAATTGATGAAACAGAAAAAAGATATGAAGAGGCAAACAAAATTAGTGAAGAAAGGTTGAAGCAGGCCTTGGATGCTGAATCAAAAATAATCCAGTTGAAGACTGCTATGCAAAGGCTTGAAGAGAAATTTTCAGATATGGAAACCGAAAACCAGGTTCTTCGACAACAGTCTCTGTTAAACACATCTGCTAAAACAATGTCAGAGCACCTTTCTACCCATATATCTGAGAAGTTGGAAAATGGTCACCACATGTTGGAAGATCAGAAAACTGCTGAAACACTGAGTGTCACACCTGTGAAGAAGTTTGGTACAGAATCTGATGGCAAAATGAGGAGATCCTTCATTGAACGTCAACATGAGAGTGTTGATGCACTTGTCAACTGTGTTATGAAAAATATTGGTTTTCATCATGGAAAGCCTGTTGCTGCATTTACCATTTACAAATGTCTTCTTCACTGGAAATCATTTGAGGCTGAAAGAACAAGTAATCAAGATGACAATGATCTTATGGCCTATTGGCTGTCAAATCTGTCTGCACTATTGTTTTTGCTCCAGCTTAGTCTGAAATCTGGTGGCACAGCTGAAGCAACTCCTGTAAAAAAACCACCAAATCCGACATCCCTCTTTGGAAGAATGACTATGGGTTTTCGTTCATCCCCTTCTTCTGCCAACCTTCCTACCCCGGAGGTTGTTCGCAAGGTAGAAGCTAAATATCCTGCTTTGCTTTTCAAGCAACAGCTCACAGCCTATGTGGAGAAAATATATGGCATCCTTCGGGACAACCTGAAGAAAGAATTGGCATCATTCCTTTCTTTATGTATCCAGTCACATGCTTTTGTTTCTGTTCCTCCTGTAATTCTTGTTGCTGATATTCAGGCACCAAGAACATCTAAGGGAGTGCTACGATCTGGCCGATCTTTTGGTAAAGATTCTCCCATGGGTCACTGGCAGAATATTATAGAATCCTTGAACACTCTCCTCTGTACTCTGAAAGAGAACTTTGTACCTCCAGTCCTTATCCAAAAGATATTCACTCAAACTTTCTCATATATTAATGTTCAACTCTTCAATAGTCTTCTTCTGCGTCGTGATTGTTGCACATTCAGCAATGGTGAATATGTGAAAGCTGGTTTAGCAGAATTGGAGTTGTGGTGCTGCCAAGCAAAAGAGGAGTACGCAGGTTCATCATGGGATGAGCTTAAGCATATAAGACAAGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATCAATGATTTATGCCCAATCATGAGTGTGCAACAGCTGTACAGAATATGTACTCTTTACTGGGATGCTAACTATAACACTCGAAGTGTATCTCCCGATGTCCTTTCAAGCATGAGAGTACTTATGACTGAGGACTCTAATAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAGTTCCAGCATCCCCTTCTCAGTAGATGACTTCTCTACATCAATGCAAGAGAAGGATTTCTCAGAAATGAAAACAGCGGATGAGCTGCTTGAAAATCCTGCCTTCCGATTTTTAAATGAGTAG | 4953 | 0.4036 | MAATTNPIVGSHVWVEDSQVAWIDGEVLEVKGEQVKVLCTSGKTVVVKASSVYHKDTEAPPCGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFIRLPHLYDSHMMAQYKGAVFGELNPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRTNSAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDIKKYKLGNPRTFHYLNQSNCFELEGVDELKEYRDTRRAMDVVGISSEEQEAIFRVVAAILHLGNIEFTKGKEIDSSMPKDEKSWFHLQTAAELFLCDAKALEDSLCKRVIVTRDETITKWLDPESAALSRDALAKIVYTRLFDWLVDKINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLYASKCPFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFADRFGLLAPEALSGSSDEVTACKRILEKVGLKGYQIGKTKVFLRSGQMADLDTRRSEVLGKSANIIQRKVRTFLARRSFVSIRLSTIQIQAACRGQLARQVYEGLRRDASSLMIQRYFRMHVARKAYKELCSSAISIQTGVRGMVARSELRFRKQTSAAIVIQSHCRKYLAQHHFTNLKKAAITTQCAWRGKVARRELRKLKMDQGAMQLCSCFGPKQNSFSVLKAARETGALQAAKNKLEKQVEDLTLRLQLEKRLRIDIQESKTQENEKLQSALQEMQLQFKETKLLLQKEREAAKREAERAPVIQEIPVVDNALLDKLTSENEKLKTLVSSLENKIDETEKRYEEANKISEERLKQALDAESKIIQLKTAMQRLEEKFSDMETENQVLRQQSLLNTSAKTMSEHLSTHISEKLENGHHMLEDQKTAETLSVTPVKKFGTESDGKMRRSFIERQHESVDALVNCVMKNIGFHHGKPVAAFTIYKCLLHWKSFEAERTSNQDDNDLMAYWLSNLSALLFLLQLSLKSGGTAEATPVKKPPNPTSLFGRMTMGFRSSPSSANLPTPEVVRKVEAKYPALLFKQQLTAYVEKIYGILRDNLKKELASFLSLCIQSHAFVSVPPVILVADIQAPRTSKGVLRSGRSFGKDSPMGHWQNIIESLNTLLCTLKENFVPPVLIQKIFTQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSPDVLSSMRVLMTEDSNNAQSDSFLLDDSSSIPFSVDDFSTSMQEKDFSEMKTADELLENPAFRFLNE | 1537 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste4g01728 | 1537 | ProSiteProfiles | Myosin motor domain profile. | 62 | 734 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Pste4g01728 | 1537 | Gene3D | Kinesin motor domain | 65 | 664 | IPR036961 | - | |
| Pste4g01728 | 1537 | Gene3D | - | 668 | 735 | - | - | |
| Pste4g01728 | 1537 | Pfam | DIL domain | 1359 | 1462 | IPR002710 | - | |
| Pste4g01728 | 1537 | FunFam | Myosin heavy chain | 254 | 309 | - | - | |
| Pste4g01728 | 1537 | Gene3D | - | 254 | 312 | - | - | |
| Pste4g01728 | 1537 | ProSiteProfiles | IQ motif profile. | 785 | 814 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | SMART | DIL_2 | 1358 | 1465 | IPR002710 | - | |
| Pste4g01728 | 1537 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 314 | 603 | - | - | |
| Pste4g01728 | 1537 | PRINTS | Myosin heavy chain signature | 431 | 459 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Pste4g01728 | 1537 | PRINTS | Myosin heavy chain signature | 484 | 512 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Pste4g01728 | 1537 | PRINTS | Myosin heavy chain signature | 198 | 225 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Pste4g01728 | 1537 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Pste4g01728 | 1537 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Pste4g01728 | 1537 | ProSiteProfiles | IQ motif profile. | 810 | 837 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | Pfam | Myosin head (motor domain) | 64 | 722 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Pste4g01728 | 1537 | Gene3D | - | 441 | 625 | - | - | |
| Pste4g01728 | 1537 | Pfam | IQ calmodulin-binding motif | 763 | 780 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | Pfam | IQ calmodulin-binding motif | 811 | 829 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | Pfam | IQ calmodulin-binding motif | 790 | 806 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | Pfam | IQ calmodulin-binding motif | 834 | 853 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | Pfam | IQ calmodulin-binding motif | 739 | 757 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | Pfam | IQ calmodulin-binding motif | 858 | 877 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | Coils | Coil | 940 | 974 | - | - | |
| Pste4g01728 | 1537 | FunFam | Class V myosin | 441 | 583 | - | - | |
| Pste4g01728 | 1537 | CDD | MYSc_Myo11 | 76 | 722 | IPR036018 | - | |
| Pste4g01728 | 1537 | Gene3D | - | 835 | 885 | - | - | |
| Pste4g01728 | 1537 | Gene3D | - | 736 | 786 | - | - | |
| Pste4g01728 | 1537 | Gene3D | - | 787 | 834 | - | - | |
| Pste4g01728 | 1537 | FunFam | unconventional myosin-Va | 787 | 835 | - | - | |
| Pste4g01728 | 1537 | FunFam | Myosin 2 | 314 | 427 | - | - | |
| Pste4g01728 | 1537 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 789 | 881 | IPR027417 | - | |
| Pste4g01728 | 1537 | CDD | MyosinXI_CBD | 1132 | 1506 | IPR037975 | GO:0007015 | |
| Pste4g01728 | 1537 | ProSiteProfiles | IQ motif profile. | 833 | 862 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 32 | 786 | IPR027417 | - | |
| Pste4g01728 | 1537 | ProSiteProfiles | IQ motif profile. | 760 | 789 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | SMART | MYSc_2a | 57 | 735 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Pste4g01728 | 1537 | SMART | iq_5 | 736 | 758 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | SMART | iq_5 | 784 | 806 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | SMART | iq_5 | 855 | 877 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | SMART | iq_5 | 759 | 781 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | SMART | iq_5 | 807 | 829 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | SMART | iq_5 | 832 | 854 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Pste4g01728 | 1537 | PANTHER | MYOSIN | 835 | 1471 | - | - | |
| Pste4g01728 | 1537 | ProSiteProfiles | IQ motif profile. | 856 | 885 | IPR000048 | GO:0005515 | |
| Pste4g01728 | 1537 | FunFam | unconventional myosin-Va | 836 | 883 | - | - | |
| Pste4g01728 | 1537 | Coils | Coil | 996 | 1072 | - | - | |
| Pste4g01728 | 1537 | Pfam | Myosin N-terminal SH3-like domain | 9 | 52 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Pste4g01728 | 1537 | Coils | Coil | 908 | 935 | - | - | |
| Pste4g01728 | 1537 | ProSiteProfiles | Dilute domain profile. | 1139 | 1483 | IPR002710 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste4g01728 | Pste-Chr4 | 12941598 | 12959204 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste4g01728 | 1 | 1536 | Myosins gene family | AT5G43900 | 72.832 | 0.0 | 2303 |