Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01724 CAATATATGTATATATTATTAATTATTTCATTGCTGATTCGTCAAAGCCAAATTTGTTTGCGCTTCTAGGTTTGACAATAGTGCCTTCTTGGTGCTGACTGTTACAACAGGGAAGCTTTCACGTTGTTTCCTCAGATTGATAGCAATATTTTCATAGCGACTAGTTTCTTAATAAAAGCAGAAGATGGCAGCCTCGCAAGAATTTAAACCAGACAAAATCATGTGACATGGCATGGTAGCGGGATTGGTGGAGTTTCAAATGTGAACTCAACTAACGAGTTTCATTAAAGTTTTTTTGTTTTTCGGAGATCCCATAGTTGAGAAGAGTAATCAGTATTGGTGATTTTATTTTAGCATTGCGATTTGCAAAGAGGGACCTCACCAAACTCGTTTTGTTTCCATTCATATATAAAATACAAACATGTCATGTTGCGTTGAAAGGCTGAACGCCGCGAAGCCCAGAGCGAGCGACGTGTCGTTGCTCAGGACTAGCTTTTAGTTTTGGCTTTTAGTTTATAGCCATAGGAATCTTTTTTCTGGGTTGTAGGATCGTATAAGCTCACATAGAAAGGGGCTGCAGCAGAGAAACAAGGTTGATGGGAGCTGAGTTTTAAGGTTGCAACACCAGTGAAGTTTCTTGTGGGAGGTGCTTTAAACAAAAATGTCTTCCGGGGCGTCAACTTGGATCACGTCTCTCTCGTGTTCACCAAATGCAACTCCAAACATCCCTCACTGGCTGAGATTCATTTTCCTCTCTCCGTGTCCACAGAGAGCTCTTTTGTCTGTCGTTGACATTCTACTCTTGTTGACTCTCTTCGTGTTTGCTGTGGTAAAGCTCTGTTCTAGGTTCACTTCCAATGACAGTCCCAACCCAGAGTTCGACAAGCCACTTATCAGAAACAACAGAGTTTCTGACAGGACAACAACAGCATGGTTTAAGCTAACTCTAACTGCAACCGGTGTTTGCACAATATTGTACACCGTGGCTTGCATTCTGGTATTTACCAGTTCCACCAAGGAGCTTTGGAAGCAAATTGATGGGTTCTTTTGGTTGCTTCAGGCCATAACACAACTGGTTCTTGCAGTTTTAATCATCCATGAGAAAAGATTCAAAGCTGTTGTTCACCCTTTGTCGCTTAGAATATATTGGATTGCAAATTTCAATTTGGTTTCTTTGTTCACAGCCTCTGGGATCATACGTTTGGTCTCTGTGGGAGTGGAAGATGGAAAAAACTTCAGCTTCATGGTTGATGACACGGTGTCTTTCATTTCTCTCCCTTTGTCACTTTTTCTGCTTTGTGTTGCGATTAAAGGATCCACCGGGATTGTGTCTGGGGAAGAAACGCAACCTCTTATTGATGACGAAACTAAACTATATGACAAATCCAATGTTACTGGCTTTGCTTCGGCTTCTGCTATATCCAAGGCCTTCTGGATTTGGATAAACCCATTGTTGAGTAAAGGGTACGAGTCACCTTTGAAGATTGATGAAATTCCATCCCTTTCACCTCAGCATAGAGCTGAGAGGATGTCGGTTATCTTTGAATCAAAGTGGCCTAAATCAGATGAGAGGTCAAAGCACCCGGTTCGAACCACGTTGCTTCGGTGTTTTTGGAAGGAGATAGCCTTTACTGCCTTCCTTGCAGTTATTAGGCTATCTGTGATGTTTGTAGGGCCAGTTTTAATTCAAAGTTTTGTTGATTACACAGCAGGGAAAGGTAGCTCTGTGTATGAAGGCTACTACCTCGTGTTGATTCTCCTGTGTGCTAAATTTGTGGAAGTTTTGACAACTCACCATTTCAACTTCAACTCTCAGAAACTTGGGATGCTTATCAGATGCACCCTCATCACTTCTTTGTACAAGAAGGGGCTCAGGCTAACAGGTTCCTCGAGGCAGGATCATGGTGTTGGGCCTATTGTCAATTACATGGCCGTTGATGCTCAACAACTCTCTGATATGATGCTCCAGTTGCATGCTGTGTGGATGATGCCGTTTCAAGTTGGTATTGGTTTGTTTTTGCTGTACAACTGTCTAGGAGCGTCAGTGATTACGGCTTTGCTTGGACTTCTTGCTGTTATTTCTTTTGCTGTGGTGGCTACTAGAAAGAACAAGCGTTACCAGTTTAATGCCATGATGAGCCGTGATTCAAGGATGAAGGCAGTGAATGAGATGCTTAATTACATGCGAGTCATCAAGTTCCAAGCATGGGAAGAGCATTTCAATGGGAGGATTTTGGGTTTCCGCAAGTCCGAGTTTGACTGGCTTTCCAAGTTTATGTACTCAATCTGTAGCGTTATTATTGTGTTGTGGAGCACCCCATTGTTGATATCAACTCTCACGTTTGGTACCGCGCTTTTGCTAGGAGTTCAACTTGATGCAGGGACGGTTTTCACCACCACAACTGTGTTTAAGATCCTGCAGGAACCTATTAGGACCTTTCCTCAGAGTATGATATCTCTTTCACAAGCATTGGTATCACTTGGGAGGTTAGATAGGTACATGTCTAGCAGGGAATTGTCAGATGATTTGGTTGAGAGAGAGGAACGGTGTAATGGACACATTGCTGTGGAGGTCAAGGATGGTACCTTTAGCTGGGATGATGATGGCCAAGTGCATGACTTGAAAAATATTAATTTGGAGATTAATAAAGGGGAACTTACAGCAATTGTTGGGACTGTGGGGTCAGGGAAGTCTTCACTCCTTGCATCAATTCTTGGTGAGATGCGCAAAATTTCTGGGAAGATACAAGTTTGTGGGAGTACAGCTTATGTTGCTCAAACATCTTGGATTCAAAATGGGACCATTGAAGAAAACATTCTCTTTGGTTTACCAATGAACAGACAGAAGTACAATGAAGTTGTTAGAGTTTGTAGCTTGGAGAAAGACATGGAAATGATGGAGCATGGTGATCAGACAGAGATTGGAGAGCGTGGCATCAACCTTAGTGGGGGTCAGAAGCAGCGCATACAACTTGCCAGGGCTGTATATCAGGACTCTGATATATATCTTCTAGACGATGTTTTCAGTGCTGTTGATGCACATACTGGCACTGAAATATTCAAGGAATGCGTGAGGGGGGTTCTAAAAGGCAAGACTGTTATTCTTGTAACACACCAAGTAGACTTCCTACATAATGTGGATCTTATAGTGGTGATGAGGGAAGGAATGATCGTCCAATCAGGGAAGTACGATGATCTACTTGATTCTGGAATGGATTTTAGTGCTCTTGTTGCAGCACATGAGACATCTATGGAACTAGTGGAGCAAGGTGCAGCGATGCCTGGGGAGAGTTTGAGCAAACAATTGAAATCTCCGAAGGCAGCTTCTGATAACAGGGAAGCCAATGGCGAAAGCAATTCTCTTGACCAGCCCAAGTCTGGCAAAGAAGGTTCTAAACTTATCAAAGAAGAGGAAAGAGAAACTGGAAAAGTTAGCTTACGTATCTATAAACTCTACTGCACTGAGGCTTTTGGATGGTGGGGAATTATAGGAGTAATCTCTCTTTCTGTGTTGTGGCAAGCATCTACGATGGCTAGTGATTATTGGCTGGCATATGAAACATCAGAAGAGAATGCTCGGTTGTTCAATCCTTATGTGTTTATTTCCATCTACGCAATTATTGCTGCAGTTTCAGTTGTTTTGATTGTGCTAAGATCCTACGCCGTTACAGTCTTGGGGTTAAAGACAGCACAAATTTTCTTCTCTCAAATTCTCCTCAGCATCTTGCATGCCCCCATGTCTTTCTTTGACACTACTCCATCCGGGAGAATTCTGAGCAGGGCATCCACTGATCAGACCAATGTTGATGTCTTCATCCCCTTGTTCCTCAATTTTGTGGTGGCCATGTACATTACAGTGATCAGCATCTTCATAATCACGTGTCAAAATTCTTGGCCAACAGCTTTCTTGTTAATTCCTCTTGCTTGGTTAAACATATGGTACCGAGGTTATTTTCTTTCTTCGTCCCGTGAGTTAACTCGTCTGGACTCAATTACAAAAGCACCTGTCATTCACCATTTCTCTGAAAGCATTTCCGGGGTCATGACAATCCGTGCGTTCAGAAAGCAGAAGGAATTTTTCGGAGAAAATATTAAACGAGTGAATGCTAATTTGCGAATGGATTTCCACAACTTTAGTTCCAATGCGTGGTTGGGTTTCCGCTTAGAATTGCTAGGAAGCTTTGTTTTTTGCTGTTCTGCTATGTTCATGATCATGTTACCCAGCAGTATCATAAAGCCAGAAAATGTTGGTTTGTCGCTCTCATATGGATTATCGTTAAATGCCGTGATGTTCTGGGCCATATACATGAGCTGTTTCATTGAAAACAAATTGGTATCTGTGGAGAGGATCAAACAGTTCACAAATATTCCATCGGAAGCAACATGGAACATTAAGGATCGTCTGCCTCCTGCAAATTGGCCCAGTCAAGGCAATGTTGATATCAAAGACTTGCAGGTCAGATATCGTCCAAACACCCCTTTGGTTCTTAAAGGCATTACCTTAAGCATCAAGGGAGGAGAAAAGATTGGTGTTGTTGGTCGAACAGGAAGTGGAAAATCTACTTTAATTCAAGTTTTCTTCAGGCTGGTGGAACCTACAGGAGGGAAAATAATCATTGATGGCATTGACATATCTGCCTTGGGGCTTCATGATCTTAGATCACGATTTGGTATCATCCCTCAGGAGCCTGTCCTTTTTGAAGGAACTGTAAGAAGTAACATCGACCCAACTGGACAGTACACAGATGAAGAGATATGGAAGAGTTTGGAACGTTGTCAACTAAAAGATACAGTGGCTTCTAAGCCTGAGAAACTTGACTCTTTAGTGGTTGATAATGGAGATAACTGGAGTGTGGGACAGAGGCAGTTGCTTTGTTTAGGGAGGGTTATGCTTAAACAAAGTAGGTTGTTGTTCATGGATGAGGCAACAGCTTCAGTTGATTCTCAAACAGATGCTGTAATTCAGAGGATAATCCGAGAAGACTTTGCTGCACGTACCATCATCAGCATTGCTCACAGAATACCAACGGTAATGGACTGTGATAGAGTTCTAGTTGTAGATGCAGGGAGGGCCAAAGAATTTGACACACCAGCCAACTTGCTCCAAAGGCCATCTCTCTTTGGGGCATTAGTTCAAGAGTATGCCAACCGCTCTAGTGGCCTATAAAACTTTCATGTGCCTGCCTCCGCCATTCATATAGCAACTTAATAACAGAAAACCAAACTCAGGCTAAGCCTGTTGAGTATTGATTGATCTTCCAAGTGCCATGTTAAGAGAAGCAGGCACTTTATTGTTGACGCAGGAAACTAGTGTAGAAATGCAATCACCATCCCGAATAATTACTATTTTGACAAGTGAAAGAACGAGAAACGCTTATATATAGTCACTTTAAGTCCTAATTTATATACTTCAGTGTTGATTGAGTGTAACAATGAATTACAAAGTTCAACAATTGAATTTACAGTATACTGAATTATGTATAAGTAATAACATGCTTTGTACTTCTAATGGAGGATTAACTTGCAACATTAAATGTCAGGTAGACCTTGTATGTGTAGTAAAAGTTTCAGCAACAATGCAGACAAACATAAATTAAAAGTCTGAAACGTATGCATACTGTTTTAAGGATATTTGTGACATAAAAATCACACTTTAAGAATTAACAGACTCTGTAAAGGTAGCAGCAAAGCAACGTCAATTTTATTTATCAGTGTTAGTGTCACCATTTTTTGATTTAGTGTAGAAAAATACTCTTTTA 5759 0.4148 MSSGASTWITSLSCSPNATPNIPHWLRFIFLSPCPQRALLSVVDILLLLTLFVFAVVKLCSRFTSNDSPNPEFDKPLIRNNRVSDRTTTAWFKLTLTATGVCTILYTVACILVFTSSTKELWKQIDGFFWLLQAITQLVLAVLIIHEKRFKAVVHPLSLRIYWIANFNLVSLFTASGIIRLVSVGVEDGKNFSFMVDDTVSFISLPLSLFLLCVAIKGSTGIVSGEETQPLIDDETKLYDKSNVTGFASASAISKAFWIWINPLLSKGYESPLKIDEIPSLSPQHRAERMSVIFESKWPKSDERSKHPVRTTLLRCFWKEIAFTAFLAVIRLSVMFVGPVLIQSFVDYTAGKGSSVYEGYYLVLILLCAKFVEVLTTHHFNFNSQKLGMLIRCTLITSLYKKGLRLTGSSRQDHGVGPIVNYMAVDAQQLSDMMLQLHAVWMMPFQVGIGLFLLYNCLGASVITALLGLLAVISFAVVATRKNKRYQFNAMMSRDSRMKAVNEMLNYMRVIKFQAWEEHFNGRILGFRKSEFDWLSKFMYSICSVIIVLWSTPLLISTLTFGTALLLGVQLDAGTVFTTTTVFKILQEPIRTFPQSMISLSQALVSLGRLDRYMSSRELSDDLVEREERCNGHIAVEVKDGTFSWDDDGQVHDLKNINLEINKGELTAIVGTVGSGKSSLLASILGEMRKISGKIQVCGSTAYVAQTSWIQNGTIEENILFGLPMNRQKYNEVVRVCSLEKDMEMMEHGDQTEIGERGINLSGGQKQRIQLARAVYQDSDIYLLDDVFSAVDAHTGTEIFKECVRGVLKGKTVILVTHQVDFLHNVDLIVVMREGMIVQSGKYDDLLDSGMDFSALVAAHETSMELVEQGAAMPGESLSKQLKSPKAASDNREANGESNSLDQPKSGKEGSKLIKEEERETGKVSLRIYKLYCTEAFGWWGIIGVISLSVLWQASTMASDYWLAYETSEENARLFNPYVFISIYAIIAAVSVVLIVLRSYAVTVLGLKTAQIFFSQILLSILHAPMSFFDTTPSGRILSRASTDQTNVDVFIPLFLNFVVAMYITVISIFIITCQNSWPTAFLLIPLAWLNIWYRGYFLSSSRELTRLDSITKAPVIHHFSESISGVMTIRAFRKQKEFFGENIKRVNANLRMDFHNFSSNAWLGFRLELLGSFVFCCSAMFMIMLPSSIIKPENVGLSLSYGLSLNAVMFWAIYMSCFIENKLVSVERIKQFTNIPSEATWNIKDRLPPANWPSQGNVDIKDLQVRYRPNTPLVLKGITLSIKGGEKIGVVGRTGSGKSTLIQVFFRLVEPTGGKIIIDGIDISALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTDEEIWKSLERCQLKDTVASKPEKLDSLVVDNGDNWSVGQRQLLCLGRVMLKQSRLLFMDEATASVDSQTDAVIQRIIREDFAARTIISIAHRIPTVMDCDRVLVVDAGRAKEFDTPANLLQRPSLFGALVQEYANRSSGL 1501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01724 1501 CDD ABC_6TM_ABCC_D2 942 1234 IPR044726 GO:0140359
Pste4g01724 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1259 1493 IPR003439 GO:0005524
Pste4g01724 1501 Pfam ABC transporter transmembrane region 975 1187 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g01724 1501 Pfam ABC transporter transmembrane region 323 589 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g01724 1501 MobiDBLite consensus disorder prediction 878 914 - -
Pste4g01724 1501 CDD ABCC_MRP_domain2 1257 1477 - -
Pste4g01724 1501 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 248 1495 - -
Pste4g01724 1501 Gene3D - 1242 1491 IPR027417 -
Pste4g01724 1501 FunFam ABC transporter C family member 10 305 618 - -
Pste4g01724 1501 SMART AAA_5 1285 1469 IPR003593 GO:0016887
Pste4g01724 1501 SMART AAA_5 663 844 IPR003593 GO:0016887
Pste4g01724 1501 Pfam ABC transporter 654 787 IPR003439 GO:0005524
Pste4g01724 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 633 857 IPR027417 -
Pste4g01724 1501 CDD ABC_6TM_ABCC_D1 323 610 IPR044746 GO:0140359
Pste4g01724 1501 Gene3D ABC transporter type 1, transmembrane domain 307 614 IPR036640 GO:0005524|GO:0016020
Pste4g01724 1501 Gene3D ABC transporter type 1, transmembrane domain 905 1240 IPR036640 GO:0005524|GO:0016020
Pste4g01724 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 322 602 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g01724 1501 Gene3D - 615 875 IPR027417 -
Pste4g01724 1501 Pfam ABC transporter 1276 1424 IPR003439 GO:0005524
Pste4g01724 1501 FunFam ABC transporter C family member 4 619 877 - -
Pste4g01724 1501 ProSitePatterns ABC transporters family signature. 761 775 IPR017871 GO:0005524|GO:0016887
Pste4g01724 1501 CDD ABCC_MRP_domain1 636 835 - -
Pste4g01724 1501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1252 1492 IPR027417 -
Pste4g01724 1501 MobiDBLite consensus disorder prediction 891 906 - -
Pste4g01724 1501 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 943 1222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g01724 1501 SUPERFAMILY ABC transporter transmembrane region 939 1239 IPR036640 GO:0005524|GO:0016020
Pste4g01724 1501 SUPERFAMILY ABC transporter transmembrane region 313 615 IPR036640 GO:0005524|GO:0016020
Pste4g01724 1501 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 636 859 IPR003439 GO:0005524
Pste4g01724 1501 FunFam ABC transporter C family member 3 1242 1493 - -
Pste4g01724 1501 FunFam ABC transporter C family member 5 905 1240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01724 Pste-Chr4 12869716 12879765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01724 636 885 Calmodulin-binding Proteins AT2G36910 30.741 7.66e-30 127