Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01720 ATGCCATCTCGACCACTGTCGACGTCTGCAGCGCCTCCCCACGATGACAACCACGGTCCTCTGTACGCTTCCGTTTGCTCTTTCTTGTTTTTATTTGTCCTCTGTCTCCGCAAGCGTAAACGAACCACCCCCTCCCCCTCGGACTCCAGCCCCCCTTACTCGTTCTCTTTTCCCGTCCTCCGGCGCGCCACGAACTCGTTTGCCACTCGGCTGGGCCACGGGGGGTTCGGCCCCGTGTTCTCGGGCAGCCTGGGCGGAGACGCCGTGGCCGTGAAGCTGATGGACTCGGCCTCCCTCCAGGGCGAGCGTGAGTTCCACAACGAGGTGTTCTTTGCGTCGAGACTCCGGTCCCCTCTGGTGGTCCCCGCCATCGGATTCTCGTCGGAGCCGAAAGAAGGGCGTTTCCTGCTGGTGTACCCGCTGATGCAGAACGGCAACCTCCACGACGCTCTCCTCCGCAATAAGGTCCCCCAGCTGAGTCTGTGGAAAAACCGCTTCTCCATTATCGTGGACGTGGCCGAAGCAATCCACTACCTCCACTCCCTGGACCCCCCCATCATCCACGGCGACATCAAGCCCAGTAACATCCTTCTCGACGCCTCCTTCTCGGCCAAACTCGCCGACTTCGGCCTCGCCCGCTTCAAATCCCATGACACGAAAAAGGAAGAGTCTGCGAGCGACGCTGGTTCTGAATTAGAATCCCAGAGCGTCAACACTGAGCTATCCTTTGACGATTGTTGGAAAGATAATTACGTTATGGATTGGATTGGGAAGGAGGTGAGGCCGAAAGAGTTGAAGAACGCTTCTGGTGCCTCCACTAGTGGAACGGTGGAGAAAGAGAAAGAGAAAAAGAAAAAGAGAAGGGCGGCCAGGGAATGGTGGAGGGAGGAGTACGCTGAAGAGCTTGCCAGGAAGAAGAAGAAGAAAAAGAAAAAGAGAAAGAAGAAGAAGGCAAAAGAAGATGATTTGGAGATAGAAGATGTAAATGTATACAAGAGAGAGAGGAACAGAAGCCGTAGTGTAGACTGGTGGTTGAGTGGTAACAGTTATGATTCTGGAACAGGGAGTGAAGAGATAGTAGGGAATAGGAATAGGAATAGGAATAGGAATAGGAATAGTAGTGGGAGCATGAGAGGAACAGTGATGTACGCTGCTCCGGAGTATGGGTACAGCGGAGAGGTGTCTGAGAAGTGTGACGTGTACAGCTTGGGGGTTTTGTTACTAGTAATAGTATCAGGGAGGAGGCCGCTTCAGGTGACGGGGTCGCCGATATCGGAGTTTCAACGTGCGAATCTGGTGTCATGGGCGAGGCAATGCGGGAAGAGAGGGAAGCTACTGGAAGTGGTGGATGAGAGTGTTGAAGGCTTGGATAAAGACCAGGCGAGTGTGTGCGTGACGGTTGCGCTCATGTGTTTGTTAAAGTCACCTGCTCGTCGTCCTTCCATCCAGGAGGTTCTCAGAATGCTCCACCCTCACTTCTTCGCCTCCTAA 1491 0.5406 MPSRPLSTSAAPPHDDNHGPLYASVCSFLFLFVLCLRKRKRTTPSPSDSSPPYSFSFPVLRRATNSFATRLGHGGFGPVFSGSLGGDAVAVKLMDSASLQGEREFHNEVFFASRLRSPLVVPAIGFSSEPKEGRFLLVYPLMQNGNLHDALLRNKVPQLSLWKNRFSIIVDVAEAIHYLHSLDPPIIHGDIKPSNILLDASFSAKLADFGLARFKSHDTKKEESASDAGSELESQSVNTELSFDDCWKDNYVMDWIGKEVRPKELKNASGASTSGTVEKEKEKKKKRRAAREWWREEYAEELARKKKKKKKKRKKKKAKEDDLEIEDVNVYKRERNRSRSVDWWLSGNSYDSGTGSEEIVGNRNRNRNRNRNSSGSMRGTVMYAAPEYGYSGEVSEKCDVYSLGVLLLVIVSGRRPLQVTGSPISEFQRANLVSWARQCGKRGKLLEVVDESVEGLDKDQASVCVTVALMCLLKSPARRPSIQEVLRMLHPHFFAS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01720 496 Pfam Protein kinase domain 373 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01720 496 SUPERFAMILY Protein kinase-like (PK-like) 49 489 IPR011009 -
Pste4g01720 496 ProSiteProfiles Protein kinase domain profile. 65 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01720 496 Pfam Protein tyrosine and serine/threonine kinase 68 223 IPR001245 GO:0004672|GO:0006468
Pste4g01720 496 MobiDBLite consensus disorder prediction 265 286 - -
Pste4g01720 496 Gene3D Transferase(Phosphotransferase) domain 1 355 493 - -
Pste4g01720 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Pste4g01720 496 PANTHER OS07G0586332 PROTEIN 24 229 IPR044576 -
Pste4g01720 496 Coils Coil 295 326 - -
Pste4g01720 496 SMART serkin_6 65 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01720 496 Gene3D Transferase(Phosphotransferase) domain 1 51 237 - -
Pste4g01720 496 MobiDBLite consensus disorder prediction 355 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01720 Pste-Chr4 12863377 12864867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01720 379 491 Receptor kinase-like Gene Family AT3G58690 36.441 7.01e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Pste4g01720 PK_Tyr_Ser-Thr 1.1e-23 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01251 9 10865913 10868812 Pste4g01720 4 12863377 12864867 PCT