Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01693 GAAACCCTAGTTTTATATCGGGTGCTGTGTCTGTGCTACTTATCAGGAGGAGGAGAGAGGCGCGAAAATGAGCGGAGCGAAGGGGAAGAAGAAGGGAGCGAGCTTCGTGATCGATTGCGCGAAGCCGGTGGAGGATAAGATTATGGACATTGCTTCCCTCGAGAAGTTCCTTCAGGAGAGGATTAAGGTTGGCGGCAAGGCCGGTGCACTCGGCGATTCCGTTACCGTCGCTCGGGACAAGAGCAAGATCACCGTCACCTCTGACGCCAACTTCTGTAAACGGTATCTGAAATATTTAACCAAGAAGTACTTGAAAAAGCACAACGTGAGGGATTGGCTTCGGGTGATTGCATCCAACAAGGACCGGAATGTCTATGAGTTGAGATACTTCAACATCGCTGAGAACGAGGGTGAAGAGGAAGACTGAAGATCTAATTCTGGCTTTTTTTGTTAGTTTTAGTTATTGTGGAGTATCTTTTATTGGTCTTGTTTATTTACTTGTTACTTGTTGTTTAAACATTCATGTTTAATTTGGAACGTACTTTTATGTCTTTATATGAAGTTTTATAGTGATTTTGGAGATGTCGTCTTAAAAGATCAGATGCAATACATGCAACTATATGTTGGATGGGCTATCTTTAATTTTGGTACCATTATTACAGTGGGTGTTTTAAGTTTTTCCCACTTTCAATGGATCATAAAATTGCTGTCGAGTCAATGTATATCATCGTAAGTAGATTCAATACTGGGCTCAACTTTATTAAACATGTC 771 0.415 MSGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVARDKSKITVTSDANFCKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01693 119 Gene3D - 1 119 IPR038526 -
Pste4g01693 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
Pste4g01693 119 FunFam 60S ribosomal protein L22-2 1 119 - -
Pste4g01693 119 PANTHER 60S RIBOSOMAL PROTEIN L22 3 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01693 Pste-Chr4 12700271 12701873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01693 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.931 2.71e-63 187