Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01692 AAAAAATTAGGTTTGGAGAGGTATAAGAATGTTTCCACAGCGCGAAAACCATATAAGCGCAAACCTCGTCGGCGCTTACTCCTCTTTCTTCTCCTGCTTCTGCACCTCATTACCACACCCCCTTTCAAGCAGGAGAAAATCTCTCTCTCTCTCTTTCTTTCTCCTCTCGCCGCCATCACCATGCCTTCACTCTCTCTCTCTGACACTGTCACCACTCCCAAAGACAATAATAAGAAACACAGTGCCAAGAAAACAAAGAACAACCAATCCCCCACCGATCCCATCATTGCAAAGAAAGCTTCGAAACTCGTTTCCGATCTGAACACCCCCGATCCCGACCACGATGGGGTTTCGGGGAAGAAGACCAAGAAGCGCAAGGCTTCAGATTTAGACGCCATGGCGCTCACCCACGATGTCGACGACGAGACCAGTTCCGACCTCGTCGAACCCGATGCTTCTAGAGAAGATGACTCTAAGAAGAAGAAAAAGAAGAAAAAGCCCAGGTCTGAGGAGGACCCTTCAGCTTTACAGGATGAAGACAAGAAGGACGACCCCAATGCCATTTCCAAATTCAGGATTTCCGAACATTTGAGGGCCAAATTGAAGGACAAGGGAATCGAATCCCTGTTTCCCATTCAGGCCATGACCTTCGACACCATTCTCGATGGTGCTGATTTGGTTGGTCGTGCTCGCACCGGTCAGGGTAAAACTCTGGCTTTTGTGTTGCCCATCTTGGAGTCTTTGACAAATGGTCCAGCAAAGACTTCAAGAAAGACTGGCTACGGGAGGACTCCAAGCGTTCTTGTGCTTCTACCTACTAGGGAATTGGCTTGTCAGGTGTATGCTGATTTTGAAGTTTATGGTGGGGTGATGGGGTTGAGTTCCTGTTGTTTATACGGCGGGGCTCCTTATCAAGCTCAAGAAGTTAAGCTTAGGAGAGGTGTTGATATTGTAATCGGCACGCCGGGTCGTGTAAAGGATCATATTGAGAGGGGAAATATTGACCTCAGCCAACTAAAGTTTCGCGTTCTTGATGAAGCAGATGAAATGCTGAGGATGGGTTTTGTTGAAGATGTTGAACTGATTCTAGGTAAGGTAGAAGATCTTAGTAGAGTTCAGACACTTCTTTTCAGTGCTACTTTGCCAGACTGGGTTAAGCATATTGCTGCAAAATTTTTGAAACCAGATAAGAAAACTGCTGACCTTGTTGGTAATACGAAAATGAAGGCTAGTACAAATGTTAGGCATATTGTTCTTCCTTGTACTAGTGCTGCCAGGGCCCAACTTATCCCAGACATTATTCGCTGTTATAGCAGTGGAGGCCGGACAATTATATTTACCGAGACAAAGGAATCTGCTTCCCAGCTTGCAGGGATCTTGCCTGGAGCAAGAGCTCTCCATGGTGACATACAGCAATCACAACGAGAGGTTACCCTGTCTGGCTTTAGGTCTGGCAAGTTCATGACATTAGTTGCCACAAATGTGGCTGCTAGAGGTCTTGATATTAATGACGTTCAGTTAATTATCCAGTGTGAACCCCCACGTGATGTAGAAGCCTATATTCATCGTTCTGGGCGCACAGGAAGAGCAGGCAATAGTGGAGTTGCTGTTATGCTTTATGATCCAAAAAGATCGAATGTATCTAGAATAGAAAGAGAGTCTGGTGTAAAATTTGAACACATATCTGCCCCTCAACCCGATGATATTGCCAAAGCTGTTGGTGGGGAAGCTGCTGAAATGATTACCCAAGTGTCTGATAGTGTGATTCCTGCATTCAAGTCTGCTGCTGAAGAGCTTTTGAACAGTTCTGGTTTATCAGTTGTTGAATTACTTGCAAAGGCTCTTGCCAAGGCTGTTGGTTATACTGAAATAAAGCAAAGATCACTTCTCACCTCCATGGAAAACTATGTCACCTTACTTCTTGAGATTGGAAAGCCTATCTTCACCCCATCTTTTGCATATGGAGTCTTGAGGAGATTCTTGCCTGAAGAGAAAGTTGAGGCTGTGAAAGGTCTTTCACTTACTGCTGATGGAAATGGTGTTGTTTTTGATGTACCAGCTGAAGATTTAGATACATATCTTACTGGTCAAGAAAACGCCTCGAATGTAAGTTTAGAGGTGTTGAAAGCATTGCCACGTTTGCAGCAGAGAGATCAGTCAAGAGGTGGCAGATTTGGTGATGGTGGTAGAGGTGGCAATAGGTTTGGTGGAAGAGGTGGAGGCGGCAGGAATGGTAGATTTTCAAATGATAGGTTTTCCAATGGTGGTGGAAGAGGAGGTCGTGGCAACTGGGGTGGGAAGAAATGGTGA 2310 0.4545 MPSLSLSDTVTTPKDNNKKHSAKKTKNNQSPTDPIIAKKASKLVSDLNTPDPDHDGVSGKKTKKRKASDLDAMALTHDVDDETSSDLVEPDASREDDSKKKKKKKKPRSEEDPSALQDEDKKDDPNAISKFRISEHLRAKLKDKGIESLFPIQAMTFDTILDGADLVGRARTGQGKTLAFVLPILESLTNGPAKTSRKTGYGRTPSVLVLLPTRELACQVYADFEVYGGVMGLSSCCLYGGAPYQAQEVKLRRGVDIVIGTPGRVKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVEDLSRVQTLLFSATLPDWVKHIAAKFLKPDKKTADLVGNTKMKASTNVRHIVLPCTSAARAQLIPDIIRCYSSGGRTIIFTETKESASQLAGILPGARALHGDIQQSQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAVMLYDPKRSNVSRIERESGVKFEHISAPQPDDIAKAVGGEAAEMITQVSDSVIPAFKSAAEELLNSSGLSVVELLAKALAKAVGYTEIKQRSLLTSMENYVTLLLEIGKPIFTPSFAYGVLRRFLPEEKVEAVKGLSLTADGNGVVFDVPAEDLDTYLTGQENASNVSLEVLKALPRLQQRDQSRGGRFGDGGRGGNRFGGRGGGGRNGRFSNDRFSNGGGRGGRGNWGGKKW 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01692 709 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 157 339 IPR014001 -
Pste4g01692 709 SMART ultradead3 145 357 IPR014001 -
Pste4g01692 709 CDD SF2_C_DEAD 354 480 - -
Pste4g01692 709 CDD GUCT_RH7_like 567 652 - -
Pste4g01692 709 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 368 510 IPR001650 -
Pste4g01692 709 MobiDBLite consensus disorder prediction 107 127 - -
Pste4g01692 709 MobiDBLite consensus disorder prediction 53 98 - -
Pste4g01692 709 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 483 IPR027417 -
Pste4g01692 709 Pfam GUCT (NUC152) domain 560 655 IPR012562 GO:0003723|GO:0004386|GO:0005524
Pste4g01692 709 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 283 291 IPR000629 -
Pste4g01692 709 Gene3D - 75 339 IPR027417 -
Pste4g01692 709 SMART helicmild6 394 471 IPR001650 -
Pste4g01692 709 MobiDBLite consensus disorder prediction 1 127 - -
Pste4g01692 709 Pfam Helicase conserved C-terminal domain 372 471 IPR001650 -
Pste4g01692 709 MobiDBLite consensus disorder prediction 658 709 - -
Pste4g01692 709 Pfam DEAD/DEAH box helicase 150 327 IPR011545 GO:0003676|GO:0005524
Pste4g01692 709 Gene3D - 578 649 - -
Pste4g01692 709 FunFam DEAD-box ATP-dependent RNA helicase 7 577 649 - -
Pste4g01692 709 SUPERFAMILY RNA-binding domain, RBD 564 647 IPR035979 GO:0003676
Pste4g01692 709 Gene3D - 351 577 IPR027417 -
Pste4g01692 709 CDD DEADc 137 334 - -
Pste4g01692 709 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 90 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01692 Pste-Chr4 12697752 12702355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01692 145 477 Eukaryotic Initiation Factors Gene Family AT1G72730 31.157 3.93e-39 148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01692 4 12697752 12702355 Pste4g01692 4 12697752 12702355 ECH