Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01677 ATGAAAGCGAACGCTGGGAAACGGCGAGTACAAATGACGGCGGCTACCACCCATATATACAGTGACACATTTTCTCATCTCTTCAACTACGTCTTCTGCTTCGTCCTCATAACAATGCAGCGTAATGCCTTCGAGCCGTTCTTCTCTCTGCGCCGCCACATGCCTCCTTTGCTGCTCATGCTTTTGCTTCTCTCCCCATTTGCTTTCTCCTTCACCCACCAAGGACGAGCATTAATGGCGATGAAAGCTTCCTTCAGCAATATGGCAGACATTCTGCTTGATTGGGATGATGAGCATAATGACGACTTTTGTTCTTGGCGTGGAGTTTTCTGTGATAATGTCAGCCTTACCGTGGTTTCTCTGAACCTGTCCAGCTTGAACCTTGGTGGGGAGATATCACCAGCCATTGGTGACTTGGGGAACTTGCAATTCATAGATCTTCAAGGCAATAAACTAACCGGTCAAATACCAGATGAAATAGGAAACTGTGCAGCACTTGTTCATCTGGATTTGTCTGACAATCAGCTTTATGGTGATATACCATTCTCCTTGTCAAAGCTAAAGCAGCTTGAATTTTTGAATTTAAAGAATAATCAATTGACTGGTCCCATTCCTTCAACTTTAACACAAATTCCAAACCTGAAGACTCTCGATCTTGCTAGAAATAGACTCACTGGGGAGATTCCAAGACTACTCTATTGGAATGAAGTGTTACAATACCTTGGCTTACGAGGGAACATGCTGAGCGGTACTTTATCCCCTGATATCTGTCAATTAACTGGTTTGTGGTATTTTGATGTGAGAGGCAATAATTTGACTGGTACTATACCTGATAGCATTGGGAACTGTACAAGTTTTGCGATATTTGACATATCATATAATCAGATTACCGGAGAGATTCCATATAATATTGGATTTCTGCAAGTTGCTACTTTGTCACTCCAAGGAAATAGACTAACTGGGAAGATTCCAGAAGTGATTGGTTTAATGCAAGCCCTTGCAATATTGGATTTGAGTGAGAACGAGTTAGTGGGATCAATCCCCCCGATATTTGGCAATCTGACTTACACTGGCAAACTGTACCTTCATGGAAACATGCTTACTGGTCCAATACCTCCTGAACTGGGCAATATGTCCAAATTGAGCTACCTGCAATTGAATGACAACCACCTAGTGGGTAAAATTCCAAACGAATTTGGGAAGCTAGAACAACTTTTTGAATTGAATCTTGCAAATAATCATCTTGATGGAACTATCCCACATAACTTAAGTTCCTGCACTGCCTTAAATCAGTTTAACGTGCATGGTAATCAGTTAAGTGGTTCCATTCCATCGAGCTTCCGTATGCTTGAGAGTTTGACGTACTTAAACCTGTCTGCAAACAACTTCAAGGGGAATATACCAGTTGAGTTGGGGCATATCATTAATCTAGACACTTTGGATCTATCTAGCAATTATTTCTCAGGGCATGTGCCATCCTCTGTTGGTTATCTAGAACATCTCCTAACCATGAACTTGAGTCATAACCACCTTGAAGGTTCGTTGCCTGCTGAATTTGGGAATCTCAGAAGCATTCAGATTCTCGATTTGTCATTCAACAATTTTTCTGGTAGCATTCCTCCAGAAATTGGACAGCTGCAGAATCTAATCTTTCTGATTATGAAGAACAATAACTTGTGTGGGAAGATTCCTGATCAGCTGGCTAATTGTTTCAGTCTTACGTTACTAAATGTGTCGTATAATAATCTTTCTGGAGTTATTCCTTCATTCAATTTCTCACAATTTTCAGCTGATAGCTTCTTTGGAAATCCTTTATTATGTGGAAATTGGTTAGGATCAATTTGTCGTCCCTATGAACCAAAACCAAGAGAGGTTTTTTCAAGAGTTGCTGTTATATGCCTGACGCTAGGCATCATGATATTGTTGGCCATGGTCATTGTTGCTTTCTACAGATCCAGCCGATCGAAACAATTGATGAAAGGTTCTAGCATAAGTGGGCAAGGCATGTTGAATGTTCCCCCAAAACTCGTTGTTCTTCACATGGATATGGCTATCCACACCTTGGATGATGTAATGAGAAGTACTGAGAATCTCAATGAGAAATATATAATCGGATATGGTGCCTCTAGCACTGTATACAAATGTGTTTTGAAAAATTCCCGACCAATTGCAATTAAGCGACTATACAACCAACACCCACACAATTTAAAGGAGTTTGAGACAGAACTTGAAACGGTTGGCAGCATTAGGCACAGAAACCTTGTAACCTTGCATGGATATGCTCTTACTCCCAATGGAAATCTCCTTTTCTATGACTACATGGCGAATGGCTCACTGTGGGATCTTCTACACGGTCCCTTGAAGGTAAAACTGGATTGGGAAACTCGCCTGAGGATTGCTGTTGGGGCAGCTGAAGGACTTGCTTATCTTCATCATGACTGCAATCCGCGAATTGTTCACAGGGACATAAAATCTTCTAATATTTTGCTGGATGAAAACTTTGAGGCTCATCTCTCTGATTTTGGCACTGCAAAGTCCATCTCAACCTCAAGAACTCATGCCTCAACTTATGTGCTTGGAACTATAGGTTATATTGACCCTGATTATGCCCGAACGTCTAGGCTGAATGAAAAATCGGACATATATAGCTTTGGCATTGTTCTACTGGAGCTACTCACTGGGAAGAAGGCAGTGGACAATGAGTCTAATTTGCATCAACTGATATTATCAAAGGCAGATAACAACACTGTAATGGAGACTGTGGATCCAGAGGTCTCTATAACTTGCATTGATCTGGCTCATGTTAAGAAGACCTTTCAGCTTGCTTTGCTTTGCACGAAGAAGAACCCTTCTGAAAGGCCTACTATGAATGAAGTAGCCAGAGTGCTGGTATCATTACTTCCTTCACCTCCAAGTAAAATCCTTGCCCCACCTGCAAAAAAGTTTGACTATGCTCATTTTGTGATTGAGAAGGGACAACAACGAAAAATGGAAAGTCAACAACCTCAGCAGGATAACAACTCTACTACAAATGCTCAATGGTTTGTTCGCTTTGGGGATGTAATATCCAAGAGCACTTGACCTTTCCCACCTATGGATCTGAAGGATTCTTGTCAGTGATATTAATCGATGATTGGGTGAAAACTAATTTCTTTTTGTGATAGATATATATTTATAACATTTGACAAATAGAGGATGGGGGATGAGCCATATGAATAGGGGATAAAACACTTTACTACATAAATCTTAATGAAGTTTCTTCTGTATATCTTACAAGCACTGTCTTCAGGTATGTCAAATGGTTATGGTTACTTTCGTTTTACAATTGATAGTAGTGGTTTGTTATGGTGTAGAGCGTGCGAA 3363 0.4065 MKANAGKRRVQMTAATTHIYSDTFSHLFNYVFCFVLITMQRNAFEPFFSLRRHMPPLLLMLLLLSPFAFSFTHQGRALMAMKASFSNMADILLDWDDEHNDDFCSWRGVFCDNVSLTVVSLNLSSLNLGGEISPAIGDLGNLQFIDLQGNKLTGQIPDEIGNCAALVHLDLSDNQLYGDIPFSLSKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSPDICQLTGLWYFDVRGNNLTGTIPDSIGNCTSFAIFDISYNQITGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGSIPPIFGNLTYTGKLYLHGNMLTGPIPPELGNMSKLSYLQLNDNHLVGKIPNEFGKLEQLFELNLANNHLDGTIPHNLSSCTALNQFNVHGNQLSGSIPSSFRMLESLTYLNLSANNFKGNIPVELGHIINLDTLDLSSNYFSGHVPSSVGYLEHLLTMNLSHNHLEGSLPAEFGNLRSIQILDLSFNNFSGSIPPEIGQLQNLIFLIMKNNNLCGKIPDQLANCFSLTLLNVSYNNLSGVIPSFNFSQFSADSFFGNPLLCGNWLGSICRPYEPKPREVFSRVAVICLTLGIMILLAMVIVAFYRSSRSKQLMKGSSISGQGMLNVPPKLVVLHMDMAIHTLDDVMRSTENLNEKYIIGYGASSTVYKCVLKNSRPIAIKRLYNQHPHNLKEFETELETVGSIRHRNLVTLHGYALTPNGNLLFYDYMANGSLWDLLHGPLKVKLDWETRLRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFEAHLSDFGTAKSISTSRTHASTYVLGTIGYIDPDYARTSRLNEKSDIYSFGIVLLELLTGKKAVDNESNLHQLILSKADNNTVMETVDPEVSITCIDLAHVKKTFQLALLCTKKNPSERPTMNEVARVLVSLLPSPPSKILAPPAKKFDYAHFVIEKGQQRKMESQQPQQDNNSTTNAQWFVRFGDVISKST 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01677 1026 Gene3D Ribonuclease Inhibitor 235 344 IPR032675 -
Pste4g01677 1026 Gene3D Ribonuclease Inhibitor 72 234 IPR032675 -
Pste4g01677 1026 ProSitePatterns Protein kinases ATP-binding region signature. 704 726 IPR017441 GO:0005524
Pste4g01677 1026 Gene3D Phosphorylase Kinase; domain 1 671 773 - -
Pste4g01677 1026 Pfam Leucine rich repeat N-terminal domain 73 112 IPR013210 -
Pste4g01677 1026 Gene3D Transferase(Phosphotransferase) domain 1 774 971 - -
Pste4g01677 1026 SUPERFAMILY Protein kinase-like (PK-like) 681 963 IPR011009 -
Pste4g01677 1026 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 346 618 - -
Pste4g01677 1026 ProSiteProfiles Leucine-rich repeat profile. 213 235 IPR001611 GO:0005515
Pste4g01677 1026 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 669 773 - -
Pste4g01677 1026 SMART serkin_6 698 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01677 1026 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 236 345 - -
Pste4g01677 1026 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 210 964 - -
Pste4g01677 1026 SUPERFAMILY L domain-like 307 396 - -
Pste4g01677 1026 Pfam Protein kinase domain 700 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01677 1026 ProSiteProfiles Protein kinase domain profile. 698 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01677 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Pste4g01677 1026 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 774 973 - -
Pste4g01677 1026 Gene3D Ribonuclease Inhibitor 345 618 IPR032675 -
Pste4g01677 1026 Pfam Leucine rich repeat 476 535 IPR001611 GO:0005515
Pste4g01677 1026 Pfam Leucine rich repeat 166 224 IPR001611 GO:0005515
Pste4g01677 1026 SMART LRR_typ_2 187 210 IPR003591 -
Pste4g01677 1026 SMART LRR_typ_2 450 474 IPR003591 -
Pste4g01677 1026 SMART LRR_typ_2 522 546 IPR003591 -
Pste4g01677 1026 SMART LRR_typ_2 330 353 IPR003591 -
Pste4g01677 1026 SMART LRR_typ_2 402 426 IPR003591 -
Pste4g01677 1026 SMART LRR_typ_2 211 235 IPR003591 -
Pste4g01677 1026 SMART LRR_typ_2 498 521 IPR003591 -
Pste4g01677 1026 SMART LRR_typ_2 139 163 IPR003591 -
Pste4g01677 1026 SMART LRR_typ_2 259 283 IPR003591 -
Pste4g01677 1026 SMART LRR_typ_2 378 401 IPR003591 -
Pste4g01677 1026 SUPERFAMILY RNI-like 145 593 - -
Pste4g01677 1026 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 71 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01677 Pste-Chr4 12559937 12567593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01677 307 597 Receptor kinase-like Gene Family AT5G07180 38.832 2.94e-45 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Pste4g01677 Pkinase 4.8e-43 CL0016