Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01668 ATGGCTCTCAATAATATCTCTGTCCTTGTATTTTCTCTTTCCTATATGCTTTCATTCTCCATCTTAGCCTCATTGTCCTTAGCTGATACGGGTTCATCCTCCATTGTGCCTCCAGAAACCATTTGCGGGTCCACCCTAGACCCTGCTTATTGCAAAACCGTGCTTGGTAATAAAAATGGTAACATCTTCGACTATGGTCGCATTTCTTTTCAAAAGTCCTTATCCCAGGCCCGTAAGTTTTTAAACTTAGTGGACTCCTATCTTCAAATTAACTCATCTTTATCCCAATACACAATTGGTGCTCTTGAAGATTGTCGATTCCTTGCTGAACAAAGTCAAGAATATTTGTCAACCATCTATGCCACTGCTAACCAAGCTAATGCTGTTCTTCCAACTTCTCAAGCTGAAGATTTTGAAACCTATCTCAGTGCTGTTTTGACTAACCAACAGACATGTTTGGACGGGCTACCAAGTTCAGCTTCAGATGCAAGGGTGAAGAACGATGTGTCCTCATCTCTCTCTGATGACTCGAAGCTCCATAGTGTTACGTTAGCTTTGTTCCTAAAGGGTTGGGTGCCAGAGAAGAAAATAGTGACATCATGGCCACAAAATGGGAGACATTTGGATTTCAAAAATGGTCGCTTGCCATTGATCATGTCAGACCGAGTACGTGGCATTTATGATTCAGCCAGGCATCATGGGAGGAAGCTACTAGCAAAACCAGACAAAACAGACCAAAGTGTTGTGGTAAATGGCATTGTGGTTGTTAGTCAAGATGGAAGCGGAAACTTCACCACCATCAATGATGCAATTGACGCTGCACCAAATAATACAGCTGCTGATGCCGGCTATTTCCTTATTTTTATCAATGAGGGGGTGTATCAGGAATATGTATCCATTGCCAAAACCAAGAAGTATTTAATGCTAATTGGAGAAGGAATCAATCGGACAATCATCACTGGCAATCATAGTGTTGGAGATAATTTTACAACATTCAACTCAGCAACAGTAGCTGTGGTTGCTCAAGGGTTTGTGGCAGTTAACATAACCTTCCGTAACACTGCTGGACCAAGCAAAGGCCAAGCAGTTGCACTAAGAAGTGGAGCGGATATGTCCACTTTCTATAGTTGCAGCTTTGAAGGGTATCAAGATACATTATATACACATTCTTTGAGACAGTTTTACAGAGAATGTGATATCTATGGCACCATAGACTACATATTTGGTAATGCTGCTGTTGTTTTGCAAAATTGCAACATCTATTCTCGCCTCCCCCTCGGTGGACAATTCAACACAATCACAGCTCAAGGTCGAACTGACCCAAATCAAAACACTGGCACTTCCATACAGAACGCAACTATTAAAGCTGCTGATGATTTAGCTTCGAATGTTGGCACTGTCCAAACTTATCTTGGGAGACCATGGAAGAATTATTCAAGGACAGTCTTTATGCAGTCCTTTATGGATAGTTTGATTAACTCAGCTGGTTGGCATGAATGGAGTGGTGATTTTGCATTGAGTACCTTGTACTATGCAGAATATAATAACACGGGACCTGGTTCAGACACTACAAATCGAGTGACATGGTCTGGTTATCATGTTATCAATGCCACAGATGCAGCCAATTTTACTGTCTCCAATTTCATAGGTGGGGACAATTGGATTCCTCAAACTGGTGTCCCATACTTGAGTGGGTTGATGTAG 1704 0.4173 MALNNISVLVFSLSYMLSFSILASLSLADTGSSSIVPPETICGSTLDPAYCKTVLGNKNGNIFDYGRISFQKSLSQARKFLNLVDSYLQINSSLSQYTIGALEDCRFLAEQSQEYLSTIYATANQANAVLPTSQAEDFETYLSAVLTNQQTCLDGLPSSASDARVKNDVSSSLSDDSKLHSVTLALFLKGWVPEKKIVTSWPQNGRHLDFKNGRLPLIMSDRVRGIYDSARHHGRKLLAKPDKTDQSVVVNGIVVVSQDGSGNFTTINDAIDAAPNNTAADAGYFLIFINEGVYQEYVSIAKTKKYLMLIGEGINRTIITGNHSVGDNFTTFNSATVAVVAQGFVAVNITFRNTAGPSKGQAVALRSGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTIDYIFGNAAVVLQNCNIYSRLPLGGQFNTITAQGRTDPNQNTGTSIQNATIKAADDLASNVGTVQTYLGRPWKNYSRTVFMQSFMDSLINSAGWHEWSGDFALSTLYYAEYNNTGPGSDTTNRVTWSGYHVINATDAANFTVSNFIGGDNWIPQTGVPYLSGLM 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01668 567 Pfam Plant invertase/pectin methylesterase inhibitor 39 186 IPR006501 GO:0004857
Pste4g01668 567 CDD PMEI-like_3 40 191 - -
Pste4g01668 567 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Pste4g01668 567 SUPERFAMILY Pectin lyase-like 249 565 IPR011050 -
Pste4g01668 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 187 IPR035513 -
Pste4g01668 567 Gene3D - 252 567 IPR012334 -
Pste4g01668 567 Pfam Pectinesterase 254 552 IPR000070 GO:0030599|GO:0042545
Pste4g01668 567 FunFam Pectinesterase 247 566 - -
Pste4g01668 567 FunFam Pectinesterase 39 189 - -
Pste4g01668 567 SMART PMEI_2 33 186 IPR006501 GO:0004857
Pste4g01668 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 189 IPR035513 -
Pste4g01668 567 PANTHER PECTINESTERASE 24 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01668 Pste-Chr4 12495860 12498046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01668 6 567 Carbohydrate Esterase AT4G02330 57.487 0.0 661