Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01667 GAGGTCCATTTCACATTATGACTATCTCAATTTAAAAAATGTGGAGTTTCACACTGTCAACGTGAAACACCCCACTCCATTTTACAAGCCAACCACTCTATATAACCACAGCACGTATACCCTGCTAGCAGCTTCACAATCACACATTCACACTTACACATACACGCACAGTAATCCACCTCATATCACATCATGAACAACCTCACACTTGCATCCATTCTGACAGTGATTTTTTCGCTGCTACTCTTCGTGGAAACTCATTTCACTAATACCCCAACAAGAGTCCCAGAACAACACCTCCATTTCCAAAGGCACATACAAGTGGCCAAATCCACATGCCAAGGAACACTCTACCCAGACCTATGTGTCTCAACTCTGGTCACATTTCCAGATCTTGCCAAAAAATCTGTCTCACAAGTGATTTCCTCAGTCGTTAATCACACAGTGTACGAGGTGAGATCATCGTCCTACAACTGCAGCGGCCTCAAAAAGAAGCTAAAAAATCTCAACCCACTTGATCAGAGAGCCTTGGATGACTGTCTCAAACTGTTCCAAGACACCAATGCAGAGCTCAAAACCACCATGGACGATCTTTCCAAGAGCACCATAGGGTCGAAGCGGCACCATGACTTGCAGACTCTGCTGAGCGGAGCAATGACCAACTTGTACACGTGCCTTGATGGCTTTGCGTACAGCAAAGCGCGCGTGAGAGACAGAATCGAGAAGAAGTTGCTTGAGATATCACATCACATTAGCAACTCGTTGGCCATGCTGAATAAAGTGCCTGGAGTGAAGAAAACAACAATGTCGGAACCTGAGGTATTCCCCGAATATGGAAAGATGAAAAAGGGGTTCCCCTCGTGGGTGTCCCCCAAAGACCGAAAGCTACTCCAAGCTGCAGTTAATGAGACCAAGTTCGACCTTGTTGTTTCCAAAGATGGCACTGGCAATTTCACCACTATAGGGGAAGCACTCGCTGTGGCTCCCAACTCCAGCACAACCAGGTTTGTGATACACATAAAGGCCGGGGCATATTTCGAGAATGTGGAAGTGATCAGGAAGAAGACGAATCTAATGTTTGTTGGAGACGGGATCGGAAAGACAGTAGTGAAAGGCAGTAGAAATGTTGTGGACGGGTGGACAACTTTTCAATCAGCTACTGTTGCTGTTGTAGGAGCAGGATTCATAGCAAAGGGTATAACATTTGAGAACTCAGCAGGGCCCGACAAACACCAAGCTGTGGCCCTGAGAAGTGGTGGTGACTTCTCAGCCTTTTACCAATGTAGCTTTGTTGGCTACCAAGACACTCTTTATGTCCATTCCCTACGTCAATTCTATCGTGAATGTGACATTTATGGGACTGTAGACTTCATTTTTGGCAATGCAGCTGTGGTCTTCCAAAACTGCAACTTGTACGCACGCAAGCCGAATGAAAATCAGAAGAACTTGTTCACTGCACAAGGCAGAGAGGACCCTAACCAAAACACTGGCATATCCATCTTGAACTGCAAGATTGCAGCTGCTGCAGACTTAATCCCAGTGAAGTCCTCGTTCAAGAGCTACCTAGGTCGACCTTGGAAAACGTACTCAAGGACTGTTTATCTAAAATCTTACATGGAGGATCTGATTGATCCAGCAGGGTGGTTGGAATGGAATGATACATTTGCATTGGATACATTGTATTACGGGGAGTACATGAATAGGGGTCCAGGTTCAAACACAAGTGCTAGAGTTACGTGGCCAGGTTATAGAGTCATTAACAGCTCCACTGAGGCAAGCCAATTCACAGTTGGACAGTTTATACAAGGCAATGATTGGTTGAACACCACCGGCATTCCATTCTTCTCTACTTTGAGTTGAGACATATTAAAGCTAGAGCCTTGTTCTCTGTTTTCAGCTATTGCTGAATCTACCGTATCACGCCATTTATAAGGTTACAATATCACATGTATTACTTCATTGGACATCATGTGACAATACCAAAAAATTACCCTTGCCTTAGTGCTCTATATATAAGCAATAGAGCAACTAACCCCACCACAGATCCCTTACCTAAA 2057 0.4473 MNNLTLASILTVIFSLLLFVETHFTNTPTRVPEQHLHFQRHIQVAKSTCQGTLYPDLCVSTLVTFPDLAKKSVSQVISSVVNHTVYEVRSSSYNCSGLKKKLKNLNPLDQRALDDCLKLFQDTNAELKTTMDDLSKSTIGSKRHHDLQTLLSGAMTNLYTCLDGFAYSKARVRDRIEKKLLEISHHISNSLAMLNKVPGVKKTTMSEPEVFPEYGKMKKGFPSWVSPKDRKLLQAAVNETKFDLVVSKDGTGNFTTIGEALAVAPNSSTTRFVIHIKAGAYFENVEVIRKKTNLMFVGDGIGKTVVKGSRNVVDGWTTFQSATVAVVGAGFIAKGITFENSAGPDKHQAVALRSGGDFSAFYQCSFVGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYARKPNENQKNLFTAQGREDPNQNTGISILNCKIAAAADLIPVKSSFKSYLGRPWKTYSRTVYLKSYMEDLIDPAGWLEWNDTFALDTLYYGEYMNRGPGSNTSARVTWPGYRVINSSTEASQFTVGQFIQGNDWLNTTGIPFFSTLS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01667 555 CDD PMEI-like_3 47 199 - -
Pste4g01667 555 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
Pste4g01667 555 NCBIfam pectinesterase inhibitor domain 11 196 IPR006501 GO:0004857
Pste4g01667 555 Pfam Plant invertase/pectin methylesterase inhibitor 46 193 IPR006501 GO:0004857
Pste4g01667 555 FunFam Pectinesterase 42 199 - -
Pste4g01667 555 Pfam Pectinesterase 243 540 IPR000070 GO:0030599|GO:0042545
Pste4g01667 555 FunFam Pectinesterase 237 554 - -
Pste4g01667 555 Gene3D - 237 554 IPR012334 -
Pste4g01667 555 PANTHER PECTINESTERASE 20 544 - -
Pste4g01667 555 SMART PMEI_2 40 193 IPR006501 GO:0004857
Pste4g01667 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 198 IPR035513 -
Pste4g01667 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 199 IPR035513 -
Pste4g01667 555 SUPERFAMILY Pectin lyase-like 241 553 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01667 Pste-Chr4 12480998 12486108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01667 73 550 Carbohydrate Esterase AT4G02320 56.823 0.0 573