Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01657 TACTCATCATCAAAGCCAACATGCCAGTGAGGCAGATGAAAGAAAGCTCGGAGCAACACTTTGTGATCAAACCCCATTTGCAGAATCATATGAATCCAGCCAAGAAGACAACCAAAGCTACACAAAATGGCAAAGGTCCACCGCCACATGAAAACCATAACCAAACCGTGCCTCACTCAAAGAACAAGGGAAGAAGAAGGAGGAGATGTGGCAGAAAACCTGATCAAGGAGATGTTATGATGAGACCTAGTTGCAGGCCCTGCACTGTGACACTGACAAGTAGTGCAAATGGAAATGTCGAAAATGGTTGTATCTCTGATATGGGTGTTCCCACTTCAAGCAAGTCCTTGAGCTTAGCTCGTAGGCCTGGGTATGGACAAGTTGGGACAAAATGCATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAATATGATGTTACTATTACACCAGAAGTGTCTTCTACAATAGTGAACAGGTCTATAATAGCAGAACTTGTGAGGCTGTATAAAGAGTCTGACTTGGGGATGAGACTTCCAGCATATGATGGCAGAAAAAGTCTGTACACAGCAGGGCAGCTTCCCTTTGCTAGGAGAGAGTTTAAGATCAAGCTTGTAGATGAAGAGGATGGAGTTAATGGCCCCAAAAGGGAAAGAGAGTACAGGGTGGTGATCAAGTTTGTTGCTCGGGCAAACTTGCATCACTTGGGCCAGTTTTTAGCTGGAAGGCGTGCTGATGCACCGACAGAGGCACTTCACATCCTTGACATTGTATTAAGAGAGCTGTCAACTAGGAGGTATTGCTCCATTGGGAAGTCCTTCTTTTCACCTGATATTAGAACACCACAACGGCTTGGTGAGGGACTAGAGTCGTGGTGTGGATTTTACCAGAGCATAAGACCTACACAAATGGGCCTTTCACTTAATATTGTAGTGGAATTTGTCGGGCAGTTATTAGGAAAAGATGTGCTGTCAAGGCCATTGTCTGATGCTGATCGCATTAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAGGTAACACATAGAGGCAGTGTGAGAAGAAAATATCGTGTCTCGGGGTTGACTTCTCAACCAACGAGAGAGTTAGTGTTTCCTGTTGACGAGAACTCAACTATGAAATCAGTAGTTGAATACTTCCAAGAGATGTATGGTTTCACTATTCAATACACTCACCTTCCTTGCCTTCAAGTAGGAAACCAAAAGAAAGCTAACTATTTACCTATGGAGGCCTGCAAAATTGTTGAGGGGCAACGTTATACAAAAAGATTGAATGAGAAGCAAATTACAGCTCTATTGAAAGTTACTTGCCAGAGACCTCGTGATCGGGAAAATGACATTTTACGGACCATTCAACATCATGCTTACGATCAGGATCCTTATGCAAAGGAATTTGGAATTAAAATCAGTGAAAAGCTAGCATCTGTTGAAGCACGAATTCTTCCTGCCCCTTGGCTTAAATATCACGAAAGTGGGAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAGCCGGTGGGCATGCATAAATTTTTCACGGAGTGTGCAAGATAGTGTTGCTCGCACTTTTTGTAATGAGCTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTAACCCTGAGCCTGTTATCCCCATCTACAATGCCAAGCCTGAACAGGTGGAAAAAGCCTTGAAACATGTTTACCATGTGTCGGCGAGCAAAACTAAAGGAAAGGAATTGGAGCTTTTGTTAGCAATATTGCCAGACAATAATGGGTCTCTCTATGGTGATCTCAAGCGTATTTGTGAAACTGACCTTGGCTTAATTTCACAATGCTGTTTGACAAAGCATGTGTTCAAAATCACTAAACAATACTTGGCTAATGTGTCTCTGAAGATCAATGTGAAGATGGGAGGTAGAAACACTGTACTTCTTGATGCTGTAAGCTGCAGAATACCATTGGTTAGTGACATACCAACCATAATTTTCGGAGCTGATGTAACCCATCCTGAAAATGGAGAAGATTCCAGCCCCTCAATAGCAGCTGTAGTAGCATCCCAGGACTGGCCAGAAGTGACAAAATATGCTGGTTTAGTGTGCGCTCAAGCTCATAGGCAGGAACTTATACAGGATTTGTACAAAACTTGGCATGACCCTGTTCGTGGCACAGTTAGTGGTGGCATGATCCGAGATTTACTGGTTTCCTTTAGAAAGGCGACAGGACAAAAGCCACTACGAATTATATTTTACAGGGACGGCGTAAGTGAAGGGCAATTTTACCAAGTTTTACTTTATGAGTTGGACGCCATTCGGAAGGCATGTGCTTCCTTAGAACCAAACTACCAGCCTCCAGTAACTTTCGTTGTTGTGCAAAAAAGACATCATACCCGGTTATTTCCAAGCAATTACAGGGACAGAAGCAGTACAGATAGGAGTGGAAATATATTGCCTGGGACTGTTGTTGATTCTAAAATCTGCCATCCAACAGAATTTGATTTTTATCTATGCAGTCATGCTGGCATCCAGGGTACTAGTCGGCCAGCTCATTATCACGTTCTGTGGGATGAAAACAACTTCACAGCAGATGGAATTCAGTCTCTGACAAACAATCTTTGCTATACATATGCCAGGTGTACGCGCTCAGTATCTGTTGTTCCTCCGGCATATTATGCACATTTAGCAGCATTTCGAGCACGTTTCTATATGGAACCAAATATGCAGGATAATGGCTCTGCAGCTGATGGTAATGGTCATAGTTCCAAAGGAACAAGAGCAGCAGGAGAGTATAGTGTCAAGCCATTGCCAGACTTAAAAGAAAATGTGAAGAGAGTTATGTTTTACTGTTAGACTGATTGGACTTGGTAGATGATAGATAGGGCAGGCATAAACATGGTAGGTAAGTGAAACAATCATGGAATGCAATGTTCACCTCAAATTACTTTGTACATTAGCCATGTAGGGTTCCCATGATAGATCCATGATTACAGTTCTTGAGGCTTTAGTTTAGAACGAATTCCTACTACAAGTATTACTAGGTTTCATAGATGTTGTCAGTTGTCAAAATTGGCATTGTAAAAAATCTTCTGTCAATCCTTGTAGAAAATTTTGCCATAAGGCCTTTACAGATGTTGAAGAGTAGAAATTTCCTACTTCATCTTTGCAAGG 3227 0.4202 MPVRQMKESSEQHFVIKPHLQNHMNPAKKTTKATQNGKGPPPHENHNQTVPHSKNKGRRRRRCGRKPDQGDVMMRPSCRPCTVTLTSSANGNVENGCISDMGVPTSSKSLSLARRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSTIVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFARREFKIKLVDEEDGVNGPKREREYRVVIKFVARANLHHLGQFLAGRRADAPTEALHILDIVLRELSTRRYCSIGKSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIVVEFVGQLLGKDVLSRPLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHHAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVARTFCNELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSASKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFPSNYRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPNMQDNGSAADGNGHSSKGTRAAGEYSVKPLPDLKENVKRVMFYC 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01657 962 ProSiteProfiles Piwi domain profile. 596 917 IPR003165 GO:0003676
Pste4g01657 962 CDD Piwi_ago-like 466 916 IPR045246 -
Pste4g01657 962 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 103 918 - -
Pste4g01657 962 SMART PAZ_2_a_3 312 444 IPR003100 GO:0005515
Pste4g01657 962 Pfam Piwi domain 597 916 IPR003165 GO:0003676
Pste4g01657 962 Pfam N-terminal domain of argonaute 124 258 IPR032474 -
Pste4g01657 962 Pfam Argonaute linker 1 domain 268 309 IPR014811 -
Pste4g01657 962 SMART DUF1785_2 267 316 IPR014811 -
Pste4g01657 962 Gene3D - 665 962 IPR036397 GO:0003676
Pste4g01657 962 MobiDBLite consensus disorder prediction 1 71 - -
Pste4g01657 962 Pfam Argonaute linker 2 domain 448 494 IPR032472 -
Pste4g01657 962 SUPERFAMILY PAZ domain 310 462 IPR036085 GO:0005515
Pste4g01657 962 CDD PAZ_argonaute_like 310 421 - -
Pste4g01657 962 Gene3D paz domain 308 425 - -
Pste4g01657 962 FunFam protein argonaute 10-like 665 962 - -
Pste4g01657 962 ProSiteProfiles PAZ domain profile. 308 422 IPR003100 GO:0005515
Pste4g01657 962 MobiDBLite consensus disorder prediction 24 48 - -
Pste4g01657 962 Pfam Mid domain of argonaute 505 582 IPR032473 -
Pste4g01657 962 FunFam Argonaute 10 486 659 - -
Pste4g01657 962 Pfam PAZ domain 334 438 IPR003100 GO:0005515
Pste4g01657 962 Gene3D - 486 659 - -
Pste4g01657 962 SMART Piwi_a_2 596 917 IPR003165 GO:0003676
Pste4g01657 962 FunFam Protein argonaute-2 305 427 - -
Pste4g01657 962 SUPERFAMILY Ribonuclease H-like 588 917 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01657 Pste-Chr4 12423874 12431396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01657 1 962 Eukaryotic Initiation Factors Gene Family AT5G43810 79.900 0.0 1604
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01681 1 5187748 5190311 Pste4g01657 4 12423874 12431396 PCT