Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01640 TTTTTCCCAGGAGAGAGAGAGAGGGAGAGGGAGAGGGAGATGGTGTCTCTGAAACTTCAGAAGAGGCTTGCTGCCAGTGTTCTCAAATGTGGCAGAGGCAAGGTTTGGCTTGACCCTAATGAGGTCAATGAAATCTCCATGGCCAATTCTCGCCAAAACATAAGAAAGTTGGTAAAGGATGGTTTCATTATCAGGAAGCCAACTAAGATTCACTCTCGCTCTCGTGCCCGCCGGATGAAGGAGGCCAAGAGGAAAGGACGCCACTCTGGATATGGAAAGCGTAAGGGTACAAGAGAAGCAAGGCTCCCCACCAAAATCCTTTGGATGAGGAGGATGCGAGTCCTCAGACGATTGCTTCGCAAATACAGGGAATCGAAGAAGATTGACAAGCATATGTACCATGATATGTACATGAAGGTAAAGGGTAATGTGTTCAAGAACAAGAGGGTCTTGATGGAGAGCATACACAAGTCAAAGGCAGAGAAGGCAAGAGAGAAGACTTTATCTGACCAGTTTGAGGCCAAGCGGGCAAAGAACAAGGCAAGCAGGGAAAGGAAAATTGCTCGGAGAGAAGAGCGTTTGGCACAAGGTCCCGGAGAGAAGCCATAGGCGGCTTCTAGTGCTCCATCTACAACAGCATCCCAGCCAGCGCGAACATCAAAGAAATCAAAGAAGTGAGAGTTTGAGATTGGAATGAAGGAGCATTGAATATTTGATGCGGGTAACATGCTGAGTTACGTGGCTAATGTATTTTTGACTAATCTCTTGTTATTTTAGACAATGTTATTTTTTAGAAATTTAAGTTGTATATCTGCAATTTGCATTATGTAATTTGTCTGTCTTATTTTGGTGTGAAGGCAGAGTTGCGCCTGTCTTTCAAATATTTGCTTGTTATTTTTTCTTTTTTCAATTATCAAGTTTCTTGGGTCGATTTAAAGCTAGATCTTCCACGTGGATGAGCTTATAAATGGTCCATCGGGTGGGCCATTAGCTTATACCTGAACCCTATTTCAAGCAATATCTTTCATAATTTCTTGATGAAATTATACCATGCGCAATAAATTTTTTTACCGAGCCCTTTTCAACTTCAGGAAGTAACCCTTGAAAGAATAACCTTGCATCCACCCTTTACACTATTCTATAAGGAGGGATCAACTGATTTTTAGACCATATGCAATTCTCTGTATTATTTGTATTCACTTATGAAGTACGAATGCCAATTTCTTTTTTACTGAAATA 1239 0.4149 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERLAQGPGEKP 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01640 189 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Pste4g01640 189 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pste4g01640 189 MobiDBLite consensus disorder prediction 57 85 - -
Pste4g01640 189 FunFam Ribosomal protein L19 57 188 - -
Pste4g01640 189 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Pste4g01640 189 MobiDBLite consensus disorder prediction 144 189 - -
Pste4g01640 189 Gene3D - 57 187 - -
Pste4g01640 189 PANTHER 60S RIBOSOMAL PROTEIN L19 1 187 IPR039547 GO:0003723|GO:0003735|GO:0022625
Pste4g01640 189 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pste4g01640 189 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pste4g01640 189 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Pste4g01640 189 FunFam Ribosomal protein L19 1 56 - -
Pste4g01640 189 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Pste4g01640 189 MobiDBLite consensus disorder prediction 57 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01640 Pste-Chr4 12348442 12350843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01640 1 186 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 91.398 5.30e-124 346