Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01619 ATGCAACCGTATTTGGATTTGCAGGCACAAGCAATCATGCAGCTTGCAGCTAGTCCTGTTCAGTTAACTCAGGATGATCCTTTAAATGGAAATGCAGCTGTTTGGACTTCGCCTTGCCACTTGCCGATGGAAAAGGATGTCCTTGTTCCTGTTGATACAACAATCCTTCAGGTTGCCCATGCAGATAAGATGGTGGAGTATCCTTTGCAATACAGAGAGAAAGGGAGCATAGCTCGCGATGCTGATGTAGAGGGTCAGGCAAGCAGAAAAATGTCATTGCAGCGATATCTTGAAAAGCGTAAGGACAGGGGGAGATTGAAAAGCAAGAAATTGACTGGGATAAATTCATCTAACTTCGAGATGTATTTGAACCTTCCAGTGAAGGTCCATGCCTCAAATGGGAATTCAAGCCGCAGTAGTACTAGCTCTCCACCACAGCCTAGACTGCCTCTAGATAGTGGAGTGTCATGCTTACCTGATCAATTTTGTAATATCAGCCATCTAATTTCATCCTTCGGGAATTTCTTGTTACTGAAGTCTAAGGCATGGTTGATGGACGATAGCAATGAAGATCCAAGACTTCCTCACCGTCGCAATCCCAACGAACCAGTTTCATTGGACCGATTAGCAGAGTTGGGGCTCTTGTACTGGAACCTGAATCCAGCTATCTACCAGAACGATCAAGAGTTGACCAAGATTAGAGAAGCTAGGGGATACAACTACATGGACACGCAGAACAGAGCAGAAAAGGTGGACAATTATGAAGAGAAGTTGAAGAACTTCTACACTGAGCACATTCATCAGGATGAGGAGATTCGTTATTGTTTGGAAGGAAGGGGCTATTTTGATGTGAGAGACAAGGATGATCGCTGGATTCGCATTTTGATCAAGGCTGGTGATCTTATCATTTTACCTGCTGGGATTTATCATCGCTTTACCCTAGAGCCAAGTAACTATGTGAAGCAGTTAATGCGCTTGTTTAAGGGTGAGCCAGTATGGACAGCATATAATCGACCACAGGAAGACAATCCTGCTAGAAAGGAATACATTAAGGATCTAAGTGAGAAATTTGGTGTGTCCCTTGCAGCTCATTAG 1095 0.4393 MQPYLDLQAQAIMQLAASPVQLTQDDPLNGNAAVWTSPCHLPMEKDVLVPVDTTILQVAHADKMVEYPLQYREKGSIARDADVEGQASRKMSLQRYLEKRKDRGRLKSKKLTGINSSNFEMYLNLPVKVHASNGNSSRSSTSSPPQPRLPLDSGVSCLPDQFCNISHLISSFGNFLLLKSKAWLMDDSNEDPRLPHRRNPNEPVSLDRLAELGLLYWNLNPAIYQNDQELTKIREARGYNYMDTQNRAEKVDNYEEKLKNFYTEHIHQDEEIRYCLEGRGYFDVRDKDDRWIRILIKAGDLIILPAGIYHRFTLEPSNYVKQLMRLFKGEPVWTAYNRPQEDNPARKEYIKDLSEKFGVSLAAH 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01619 364 MobiDBLite consensus disorder prediction 132 151 - -
Pste4g01619 364 FunFam 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 179 356 - -
Pste4g01619 364 Pfam ARD/ARD' family 181 335 IPR004313 GO:0010309
Pste4g01619 364 Gene3D Jelly Rolls 179 356 IPR014710 -
Pste4g01619 364 CDD cupin_ARD 206 335 IPR004313 GO:0010309
Pste4g01619 364 Pfam Jas motif 86 103 IPR018467 -
Pste4g01619 364 SUPERFAMILY RmlC-like cupins 180 353 IPR011051 -
Pste4g01619 364 Hamap Acireductone dioxygenase [ADI1]. 180 348 IPR027496 GO:0016491|GO:0019509
Pste4g01619 364 MobiDBLite consensus disorder prediction 132 149 - -
Pste4g01619 364 PANTHER ACIREDUCTONE DIOXYGENASE 181 358 IPR004313 GO:0010309
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01619 Pste-Chr4 12227224 12235000 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01619 8 132 Tify Gene Family AT4G14720 42.520 5.69e-18 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste4g01619 ARD 2.5e-54 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01619 4 12227224 12235000 Pste4g01619 4 12227224 12235000 ECH