Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01607 ATGTATTGGGGGGATGTTATGGCTGGTCATATGGGAAGGGGTGTCCTAGTGGATGAGATATGGAGGAAGGGACCTTGGACTGCTGAAGAGGATAGGTTGCTTGTTGAGTATGTCAGCTTGCATGGTGAAGGCAGATGGAACTCTGTTGCTAGGCTTGCAGGGTTGAAAAGAAATGGGAAGAGCTGCAGATTGAGATGGGTGAATTATCTAAGACCAGACCTCAAGAGGGGACACATAACACCCCAAGAAGAGAGCATCATTTTAGATTTGCATGCAAGGTGGGGAAACAGGTGGTCAACAATTGCAAGGAGCTTGCCAGGGAGAACTGACAATGAGATAAAAAACTATTGGAGGACTCATTTCAAGAAAAAGACAAAAAGTCCCTCTGATGCAGCAGAGAAGGCAAGGAATAGACTCCTGAGGAAGCAGCAATTTCACCAGGAGCAGCAACAACAACAACAGTTTCAGCAGCAGCAGCAAGCACAACAACAACAACTGCAATTCAACTTTGACATGAGAGGCATCATGGCCTTGCTTGAGGACAACAGCCATAGAGCACCTTATTATATATCTCAATCTAGACAAGAAATGGTCAACATGCATCAAAACAACACAGAAGAGCCAGGATACTTGTACTCTATGCTCACTAGCAACTCTTCTGGTTCTTCTGCACCAGAGACCTCAGCTGAAGAAGTTTTGTGGGATGGTCTATGGAACATAGATGATGTTCATGGCAACTTCAGTGTAGCTAGTGCAGCAAGCAAAGTTGGTCTATACAATTTAGTTGCTCCCTTCTGTTAATGTTTTTGGTTAAGCATAGTACTCCTAGCTAATATAAGTCATAGTTTCATAAGACTCCAAAAACCAGGAGCTTTGGAATTTGGATTAGTTATTGTTGCATATGGTGTGTGCTAGAGTAGTAAATGATACTCTGAAGGCAACTTATTCTGTAACTTATTAATAAAGTGTC 970 0.4268 MYWGDVMAGHMGRGVLVDEIWRKGPWTAEEDRLLVEYVSLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKRGHITPQEESIILDLHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKSPSDAAEKARNRLLRKQQFHQEQQQQQQFQQQQQAQQQQLQFNFDMRGIMALLEDNSHRAPYYISQSRQEMVNMHQNNTEEPGYLYSMLTSNSSGSSAPETSAEEVLWDGLWNIDDVHGNFSVASAASKVGLYNLVAPFC 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01607 266 Gene3D - 23 75 - -
Pste4g01607 266 Pfam Myb-like DNA-binding domain 76 120 IPR001005 -
Pste4g01607 266 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Pste4g01607 266 SMART sant 75 123 IPR001005 -
Pste4g01607 266 SMART sant 22 72 IPR001005 -
Pste4g01607 266 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Pste4g01607 266 SUPERFAMILY Homeodomain-like 22 117 IPR009057 -
Pste4g01607 266 Gene3D - 80 124 - -
Pste4g01607 266 ProSiteProfiles Myb-like domain profile. 22 70 IPR001005 -
Pste4g01607 266 FunFam Myb transcription factor 23 75 - -
Pste4g01607 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 74 IPR017930 -
Pste4g01607 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 125 IPR017930 -
Pste4g01607 266 CDD SANT 80 121 IPR001005 -
Pste4g01607 266 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 21 205 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pste4g01607 266 FunFam MYB-related transcription factor 80 124 - -
Pste4g01607 266 CDD SANT 25 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01607 Pste-Chr4 12108249 12109848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01607 17 266 MYB Transcription Factor Family AT3G24310 57.471 2.75e-87 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste4g01607 Myb_DNA-binding 2e-16 CL0123