Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01601 TACAAATCGTTTTTGTTACATACTTCTAAGTTGTTCCTACTTGCTAGTATCCATCTTAGCTTACTAGGTGTTTGAAAGAGATGGGGAAGACAGGGAAATGGCTTAGAAACTTGTTGACAGGTAAGAAAGACAAGGAAAAGGAGAAGGAAAAATCTTCAACCAACCTGAATTCATCTTCAAATGGAACAGAAAACTCAACCACTCCAACTTTCACAACCCCAAAGGAGAAAAAGAGATGGAGTTTTAGAAGATCATCAGCCTCAGCCACTGCCACTTCCACAGCCACACCAACAACTTCCAAGGAATTGAACTTCGTAGAACCAAATGTCACTGTTTCACAGACAACGCAAACTGACACTGATATTCAGAATGAGCAGAGGAAGCATGCAATGGCTGTAGCTGCTGCTACTGCAGCAGCAGCTGATGCTGCGGTGGCAGCTGCTCAGGCTGTAGCTGCTGTCATCCGTTTGACTTCTGCTTCCAATGAAACATCTAAAAGCGTTGAAGATGCTGCTGCCATTAAAATCCAATCTGCCTTTCGCTCTCACTTGGCGAGAAAAGCTTTGTGTGCTCTAAGAGGATTAGTGAAGTTGCAGGCACTAGTAAGGGGACACTTGGTGAGAAAACAGGCCAAGGCGACATTGAGATGCATGCAGGCTTTGGTGACAGCACAAGCCAGAGCTCGTGCTCAGAGGATACGAATGGGATCAGAAGGAACGCCTAATCAAAAGCAATCAACGAACAGAAATGCCACAGAAGATGATTTGTTCAGGCATATATATAATGAAATGGAGAGAGATTTGGAAGACAACATAAAAATTGTAGAGATGGATGTTTGTGAATCAGATGGTAACTTCAGAAGCAGAAGCAGCAGTATATATCAACATGGACATCAAGAACAATATGACAAAAGATTTTCCACACATTATTCAACAAATAGTTCCTGTTCAAAGGAAGAAAACTACAAGGTATCACCAGCTCCTTCAGCATTGACAGAGTTGAGTCCAAGAGCCTGCAGTGGCCATTTTGATGACTGTTTCAGCACAGCACAAAGCAGCCCTCAGTTCTACTCTGCTGTGTCAAGAACAGACAATTCAAAGCACCTTTTTGCTTTCCCTAGGCCAGCTTATGCAGAATCTATGTGCTATGACTGCCCTATGTTTCCAAATTATATGGCTAACACTGAATCATCAAGGGCCAAAGTTAGATCACACAGTGCACCAAAACAAAGACCAGATACATTTGAGAGGCAACCGAGCCGACGGAGACCTTCGGTTGAGGGAAGAAATGTTCCAAGGCCACTGAGGATGCAAAGGTCATCTTCACATGTGGGTGCCACTGCTCATAACTACCAATATCCTTGGTCAATCACGCTTGATAGATCCGCAGTTTCACTCAAAGACAGCGAGTGTGGATCTACAAGTACAATGCTCACTAACACTAATTATTGCAGATCACTTGTTGCATACAACCCTCATGGAGATAGGTACTGACCACTGAGAGTGCACCTCGTGCTTCACCAAATAGAAGTCACTTTCCAAGAACACCAAGATCTAGAGTTGAGAGTTTCAGGCTGCGGAGTTTTTCCTCTTTTAGATTTCAAAACGAAATAATGACTCTGCTTTTACATATAGAGGTTTTGCAAGAGATTTATTGAAGTCCATTGATTGTAGAGTTTCTGCATCTATCCGTTGTTCGTCATGTTTGTGGATTACTTTGTAATAAAACATTGCAATGGTTCACGGTCTGTACAAAATTCACCTAGTGAGATATTACCAGTATGAG 1785 0.4252 MGKTGKWLRNLLTGKKDKEKEKEKSSTNLNSSSNGTENSTTPTFTTPKEKKRWSFRRSSASATATSTATPTTSKELNFVEPNVTVSQTTQTDTDIQNEQRKHAMAVAAATAAAADAAVAAAQAVAAVIRLTSASNETSKSVEDAAAIKIQSAFRSHLARKALCALRGLVKLQALVRGHLVRKQAKATLRCMQALVTAQARARAQRIRMGSEGTPNQKQSTNRNATEDDLFRHIYNEMERDLEDNIKIVEMDVCESDGNFRSRSSSIYQHGHQEQYDKRFSTHYSTNSSCSKEENYKVSPAPSALTELSPRACSGHFDDCFSTAQSSPQFYSAVSRTDNSKHLFAFPRPAYAESMCYDCPMFPNYMANTESSRAKVRSHSAPKQRPDTFERQPSRRRPSVEGRNVPRPLRMQRSSSHVGATAHNYQYPWSITLDRSAVSLKDSECGSTSTMLTNTNYCRSLVAYNPHGDRY 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01601 470 PANTHER IQ-DOMAIN 5-RELATED 1 400 - -
Pste4g01601 470 MobiDBLite consensus disorder prediction 57 73 - -
Pste4g01601 470 Pfam Protein of unknown function (DUF4005) 346 401 IPR025064 -
Pste4g01601 470 SMART iq_5 164 185 IPR000048 GO:0005515
Pste4g01601 470 SMART iq_5 141 163 IPR000048 GO:0005515
Pste4g01601 470 Pfam IQ calmodulin-binding motif 169 185 IPR000048 GO:0005515
Pste4g01601 470 Pfam IQ calmodulin-binding motif 144 162 IPR000048 GO:0005515
Pste4g01601 470 MobiDBLite consensus disorder prediction 10 26 - -
Pste4g01601 470 MobiDBLite consensus disorder prediction 1 73 - -
Pste4g01601 470 ProSiteProfiles IQ motif profile. 142 170 IPR000048 GO:0005515
Pste4g01601 470 MobiDBLite consensus disorder prediction 27 48 - -
Pste4g01601 470 ProSiteProfiles IQ motif profile. 166 193 IPR000048 GO:0005515
Pste4g01601 470 MobiDBLite consensus disorder prediction 372 417 - -
Pste4g01601 470 Gene3D - 141 194 - -
Pste4g01601 470 MobiDBLite consensus disorder prediction 375 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01601 Pste-Chr4 12066105 12068416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01601 1 460 IQD Protein Family AT4G14750 43.958 8.52e-100 305