Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01595 AAGAGGTTAGGGTTTGGGGTATTTGGGTGCCATTGTCGCTGTTATCATCCGCAGCTGCTCTTATTCGCACCGCAAACAGTGAGCCATGGCCGTCGGAAAGAACAAGCGCATCTCCAAAGGGAAGAAGGGTGGCAAGAAGAAGGCAGCTGATCCCTTTGCCAAGAAGGATTGGTACGACATCAAGGCTCCTTCTGTTTTTCAAGTAAAAAATGTTGGCAAAACCCTCGTCACTCGTACTCAGGGTACCAAGATTGCTTCTGAAGGACTCAAACATAGAGTGTTTGAGGTCTCATTGGCTGATCTTCAAGGCGATGAAGATCATGCATTCAGGAAGATTAGGTTGAGAGCTGAAGATGTTCAAGGAAAGAATGTGTTGACAAATTTTTGGGGAATGGACTTCACAACTGACAAGCTGCGGTCATTGGTGAGGAAATGGCAAACTCTAATTGAAGCCCATGTGGATGTGAAAACAACTGATAATTACACATTGAGGATGTTCTGCATTGGGTTTACCAAGAGAAGAAGTAACCAGGTGAAGAGAACCTGTTACGCACAATCTAGCCAGATCAGACAGATACGTAGGAAGATGAGGGAGATCATGACCAACGAGGCAACATCCTGTGATTTGAAGGAGTTGGTCCGCAAGTTTATTCCTGAGATTATTGGAAAATTGATTGAGAAGGCAACTTCTAGCATTTACCCTTTGCAGAATGTGTTTGTTCGAAAAGTCAAGATCCTTAAAGCTCCTAAGTTTGATCTTGGGAAACTAATGGAGGTTCATGGAGATTACTCAGAAGATCTTGGTACAAAGGTAGACAGACCTGCTGATGAAACAATGACAGAGGAACCCACCGAAATTGTTGGAGCTTGATTTAGTGATAATGCATTCAGTTTGTAGGTTTTCTATTCATGTTATCATTGAAAATTAAGTCTAAAACTACTGTCCAGTGTTTGTGTAAGTCGAGTGAATCAGTTTTGTTTTGACAATCAGAAAACGTTTTTGGATCTCAATATATATCTGGGTTTTGTTCAGAACCCAAAATCATATTTACTTGCATTATGACGATATCGACATATTTTATATTGTTCTTATTCTATATTTTTGTTACATTACTGACTTGTTAATTGTGTCGTGGTTTCAAAT 1144 0.4038 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGDEDHAFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMTNEATSCDLKELVRKFIPEIIGKLIEKATSSIYPLQNVFVRKVKILKAPKFDLGKLMEVHGDYSEDLGTKVDRPADETMTEEPTEIVGA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01595 261 Hamap 40S ribosomal protein S1 [RPS3A]. 1 258 IPR027500 GO:0003735|GO:0005840|GO:0006412
Pste4g01595 261 MobiDBLite consensus disorder prediction 1 15 - -
Pste4g01595 261 MobiDBLite consensus disorder prediction 240 261 - -
Pste4g01595 261 MobiDBLite consensus disorder prediction 1 20 - -
Pste4g01595 261 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 252 - -
Pste4g01595 261 Pfam Ribosomal S3Ae family 16 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Pste4g01595 261 SMART Ribosomal_S3Ae_2 15 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Pste4g01595 261 ProSitePatterns Ribosomal protein S3Ae signature. 61 73 IPR018281 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01595 Pste-Chr4 12037796 12040589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01595 1 261 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 86.260 7.51e-165 455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01595 4 12037796 12040589 Pste4g01595 4 12037796 12040589 ECH