Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01594 AATATGAACCAAAACACAACACTGGTATCTCAAACCAATCACATACACAAGATGCAACTGCAACTTATTAAGTTCCTGGCCATAACTTTGATATGGTGGAGCAATATTAATGTTGAATATGCAGTTGCAGCCACACGTGACACACGTTTGATAAACGCTGGGTGCAGTTCTATCAATACTACATTCCCAATGACTGTAATGATTGCTTCAACACTGCCTCCTTACAAATCCTGGATATATGCAAAAAAAGCCAATGGTGCCAGAGTCATATACAATGAATGCTTCCTTAGGTATGAGAGTGAGAGGTTTTACCAACAGACCAATGAACTTGGTGCTGGGGTAGCATGTGGAACAAGACTTCAAATGCCACAGAGAGCTTCAAATAGCAACACCAAAATTAATGAGTTTTATGCAGCCACTAAGACAAAAGTGGTTGATGGTAGTGCAATGTATGCCATTGCACAGTGTGTTGAAACTGCTTCAGAGGCTAAGTGTCTGGATTGCATGACTATTGCATACAACAATTTACAAAGTTGCCTTCCCAACAAAGAGGGATCAGCATATGATGCTGGTTGCTTTATGAGATACTCAACCTCACCTTTCTTTGCTGACAATCAAACCATTAATATTGCACCATATTTAAAACAAGGAGGTTCAAGCAAAAAGTGGGCTATCATAGGTGGTGTTGTTGGAGGTGTTGTTGTCCTCCTTGTGTTGTTTGCTTGGAGATTGTTTAGAAAACCAAAGAAGGTTCCCAAAGCTGATATATTGGGAGCAACTGAGTTGAAAGGTCCCGTTAGCTTCAACTATAAAGATTTAAAAGTTGCAACAAAAATTTCAGTGATGACAATAAACTTGGAGAAGGAGGGTACTCTGAAGAATGGAAAAGTTGTTGCAGTCAAGAAACTAGTATTGGGAAAATCAAGCAAAATGGAAGATGATTTTGAAAGTGAAGTAAAACTTATAAGTAACGTTCATCATCGTAATCTCGTTAGACTTCTTGGTTGTTGCAGCAAAGGCCAAGAGAGGATCCTAGTTTATGAATACATGGCAAATAGCAGTCTTGACAAATTCTTATTTGGTAGCAAAAAAGGTTCTCTTAGCTGGAAACAACGCTATGATATAATTTTGGGCACCGCAAGAGGATTAGCATATCTACATGAGGAGTTTCATGTATCCATCATTCATAGAGATATAAAGACTGGTAATATCCTTCTAGATGATGATCTCCAACCCAAAATTGCAGATTTTGGGTTGGCAAGGCTTTTACCAAGGGACCGTTCTCATCTTAGCACAAAATTTGCAGGAACATTGGGATACACAGCACCAGAGTATGCAATGCAAGGTCAACTATCAAAGAAAGCTGATACCTATAGTTATGGTATTGTGGTCCTAGAAATCATAAGTGGTCAAAAAAGTACTGAGGTGAAGGTTAATGATGAGGGTCGTGAGTACCTTCTTCAACGAGCATGGAAATTGTATGAGAAAGACATGCAGTTGGAGCTTGTGGACAAAGATATAGACCCTAGTGAATATGATGCAGAAGAAGTGAAAAAAATCATAGAGGTTGCTTTATTATGCACTCAAGCATCACCTGTAACAAGGCCAACAATGTCCGAATTAATAGTGCTACTCAAAAGCAAGAGTTTAGTGGAGAACCTACGACCAACTACACCTGTATTTGTTGACACGAAAATGATGAATCGAGAAACCACATCTCCTGGTGAATCTAATGCTACTATCTCGATTTCTAATATGAACCAAAACACAACACTGGTATCTCAAACCAATCACATACACAAGATGCAACTGCAACTTATTAAGTTCCTGGCCATAACTTTGATATGGTGGAGCAATATTAATGTTGAATATGCAGTTGCAGCCACACGTGACACACGTTTGATAAACGCTGGGTGCAGTTCTATCAATACTACATTCCCAAGTAGCTTCTTTGCGAATGTGAATGAGACATTCTCAGAGCTGAGAGGGGATATTAACAACCAAAGCATGCACTTTGGCACATCACAGAAATCCAGAGAAGCTGCCATAACATATACTATGTTTCAATGCAGAAACTATGTCTCCAAAAGTGACTGTAATGATTGCTTCAACACTGCCTCCTTACAAATCCTGGATATATGCAAAAAAGCCAATGGTGCCAGAGTCATATACAATGAATGCTTCCTTAGGTATGAGAGTGAGAGGTTTTACCAACAGACCAATGAACTTGGTGCTGGGGTAGCATGTGGGAACAAGACTTCAAATGCCACAGGTTTTATAGGTATTGGACAAGAAGCACTTAGAGAGCTTCAAATAGCAACACCAAAAATTAATGGTTTTTATGCAGCCACTAAGACAAAAGTGGCTGATGGTAGTGCAATGTATGCCATTGCACAGTGTGTTGAAACTGCTTCAGAGGCTAAGTGTCTGGATTGCATGACTATTGCATACAACAATTTACAAAGTTGCCTTCCCAACAAAGAGGGATCAGCATATGATGCTGGTTGCTTTATGAGATACTCAACCTCACCTTTCTTTGCTGACAATCAAACCATTAATATTGCACCATATTTAAAACAAGGAGGTTCAAGCAAAAAGTGGGCTATCATAGGTGGTGTTGTTGGAGGTGTTGTTGTCCTCCTTGTGTTGTTTGCTTGGAGATTGTTTAGAAAACCAAAGAAGGTTCCCAAAGCTGATATATTGGGAGCAACTGAGTTGAAAGGTCCCGTTAGCTTCAACTATAAAGATTTAAAAGTTGCAACAAAAAATTTCAGTGATGACAATAAACTTGGAGAAGGAGGTTTTGGTGCTGTATATAAGGGTACTCTGAAAAATGGAAAAGTTGTTGCTGTCAAGAAACTAGTGTTGGGAAAATCAAACAAGATGGAAGATGAGTTTGAAAGTGAAGTGAAACTTATAAGTAGCAAAAAAGGTTCTCTCAATTGGAAACAACGTTATGATATAATTTTGGGCACGACAAGGGGATTAACATATCTACATGAGGAGTTTTATGTGTCCATAATTCATAGAGATATAAAGACTGATAATATCCTTCTGGATGATGATCTCCAACCCAAAATTGCATGGAAATTGTATGAGAAAGGCATGCATTTAGAGTTTGTGGACAAAAACATAGATCCTAATGAATATGATGCAGAAGAAGTGAAAAAAATTATAAAAATTGCTTTATTATGCACTCAAGCATCACCTATAACGAGGCCAACAATGTCTGAATTAATACTGCTACTCAAAAGCAAGAGCTTAGTGGAGAACTTGCGACCAACTACGCCTATGTTTATTCAAACGAATACGAAGAATCGAGCACTCACATTTCCTAATGAATCTAATGCTACTATCTCCATTTCTATTCCATCTGGTCGATGACCATACATGGGATCAATATTGTGGTAAAAGGTTTTTGATGATGAATTAACCATCTATGTTTATGTTTATCAATCGTTCAAGTAGAGCATATGATATGAAGTAAGGAGTCCTATACTAGTGTTTTTTATTTACTAGTAGATCAAGTAAAAATTAAGAATAAC 3545 0.3808 NMNQNTTLVSQTNHIHKMQLQLIKFLAITLIWWSNINVEYAVAATRDTRLINAGCSSINTTFPMTVMIASTLPPYKSWIYAKKANGARVIYNECFLRYESERFYQQTNELGAGVACGTRLQMPQRASNSNTKINEFYAATKTKVVDGSAMYAIAQCVETASEAKCLDCMTIAYNNLQSCLPNKEGSAYDAGCFMRYSTSPFFADNQTINIAPYLKQGGSSKKWAIIGGVVGGVVVLLVLFAWRLFRKPKKVPKADILGATELKGPVSFNYKDLKVATKISVMTINLEKEGTLKNGKVVAVKKLVLGKSSKMEDDFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDKFLFGSKKGSLSWKQRYDIILGTARGLAYLHEEFHVSIIHRDIKTGNILLDDDLQPKIADFGLARLLPRDRSHLSTKFAGTLGYTAPEYAMQGQLSKKADTYSYGIVVLEIISGQKSTEVKVNDEGREYLLQRAWKLYEKDMQLELVDKDIDPSEYDAEEVKKIIEVALLCTQASPVTRPTMSELIVLLKSKSLVENLRPTTPVFVDTKMMNRETTSPGESNATISISNMNQNTTLVSQTNHIHKMQLQLIKFLAITLIWWSNINVEYAVAATRDTRLINAGCSSINTTFPSSFFANVNETFSELRGDINNQSMHFGTSQKSREAAITYTMFQCRNYVSKSDCNDCFNTASLQILDICKKANGARVIYNECFLRYESERFYQQTNELGAGVACGNKTSNATGFIGIGQEALRELQIATPKINGFYAATKTKVADGSAMYAIAQCVETASEAKCLDCMTIAYNNLQSCLPNKEGSAYDAGCFMRYSTSPFFADNQTINIAPYLKQGGSSKKWAIIGGVVGGVVVLLVLFAWRLFRKPKKVPKADILGATELKGPVSFNYKDLKVATKNFSDDNKLGEGGFGAVYKGTLKNGKVVAVKKLVLGKSNKMEDEFESEVKLISSKKGSLNWKQRYDIILGTTRGLTYLHEEFYVSIIHRDIKTDNILLDDDLQPKIAWKLYEKGMHLEFVDKNIDPNEYDAEEVKKIIKIALLCTQASPITRPTMSELILLLKSKSLVENLRPTTPMFIQTNTKNRALTFPNESNATISISIPSGR 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01594 1127 ProSiteProfiles Gnk2-homologous domain profile. 632 736 IPR002902 -
Pste4g01594 1127 ProSiteProfiles Protein kinase domain profile. 852 1127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01594 1127 SUPERFAMILY Protein kinase-like (PK-like) 292 566 IPR011009 -
Pste4g01594 1127 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1007 1019 IPR008271 GO:0004672|GO:0006468
Pste4g01594 1127 ProSitePatterns Protein kinases ATP-binding region signature. 930 953 IPR017441 GO:0005524
Pste4g01594 1127 ProSitePatterns Serine/Threonine protein kinases active-site signature. 394 406 IPR008271 GO:0004672|GO:0006468
Pste4g01594 1127 CDD STKc_IRAK 290 546 - -
Pste4g01594 1127 ProSiteProfiles Gnk2-homologous domain profile. 740 845 IPR002902 -
Pste4g01594 1127 Gene3D Phosphorylase Kinase; domain 1 288 350 - -
Pste4g01594 1127 Gene3D Transferase(Phosphotransferase) domain 1 975 1027 - -
Pste4g01594 1127 Gene3D Transferase(Phosphotransferase) domain 1 351 556 - -
Pste4g01594 1127 Pfam Salt stress response/antifungal 643 733 IPR002902 -
Pste4g01594 1127 Pfam Salt stress response/antifungal 759 842 IPR002902 -
Pste4g01594 1127 Pfam Salt stress response/antifungal 126 198 IPR002902 -
Pste4g01594 1127 Pfam Protein kinase domain 974 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01594 1127 SMART serkin_6 270 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01594 1127 SUPERFAMILY Protein kinase-like (PK-like) 913 1097 IPR011009 -
Pste4g01594 1127 Gene3D Phosphorylase Kinase; domain 1 898 974 - -
Pste4g01594 1127 Pfam Protein tyrosine and serine/threonine kinase 293 543 IPR001245 GO:0004672|GO:0006468
Pste4g01594 1127 ProSiteProfiles Gnk2-homologous domain profile. 97 201 IPR002902 -
Pste4g01594 1127 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 979 1028 - -
Pste4g01594 1127 ProSiteProfiles Protein kinase domain profile. 270 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01594 1127 Gene3D Transferase(Phosphotransferase) domain 1 1028 1098 - -
Pste4g01594 1127 FunFam Cysteine-rich receptor-like protein kinase 2 744 845 - -
Pste4g01594 1127 Gene3D - 747 845 IPR038408 -
Pste4g01594 1127 Gene3D - 118 201 IPR038408 -
Pste4g01594 1127 Gene3D - 631 736 IPR038408 -
Pste4g01594 1127 FunFam Cysteine-rich receptor-like protein kinase 2 350 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01594 Pste-Chr4 12030019 12050719 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01594 85 590 Receptor kinase-like Gene Family AT1G70520 35.821 4.88e-95 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste4g01594 PK_Tyr_Ser-Thr 2.1e-44 CL0016