Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01590 CATATATCTAAGGAGACTTTATACTTGGATATATACTACCTTAGTAAATACTATCTTAGTCCACCCAGCCATGGAAATCATCATCAACTAACTTTTTTCTTTATCAAAAACCCACATATCTTCAATTTGTAGCCTTAGATATCGAGGTTGAGAAAAACCAGAGAATAAAATATGGTGAAACTGAAGGTGGTGGCCTTAACCTTTTTCATGCTGTGGAGCTTGGAAGGTGCAATAGGAGACCCTCAACTGAATTTGCTGATATCGGAGTGCAGTGGGTTCGGGCCACCGAACTTGGCCAACTTGTACCAAAACCTAAACGCCAGTTTTGCAGACCTGAAAACGCAGGTTAACAACCAGAGCAAGCACTTTGCCACCGCGGAATCTGTCTCCGGAACAAGTCCTGTCTATGCCATGTTCCAATGCGTTAAGTACCTCTCCAACGCTGACTGCGCCACCTGCCTCACCGCCGCCGCCACCTCCATCCGCAACTGCTCCGCCACAACCAACAACGGTGCCCGTGTTGTTTATGACGGTTGCTTCCTCAGGTATGAGAGCAATGAATTCTTTGATGAGACTTCTTTAGCTGGCAACAGTATGGTTTGTGGAAATGAGAAAGCAGTTGAAGCTGCTACTTTTAATACAATTGTACAACAAGTGCTAATGGACTTAAAAGTTGCAACACCCAAAATTACTGGTTTCTTTGCAGCTACCAAGACACAAGTGGTTGATGGTGCCATCTATGCTATTGCACAATGTGCTGAAACTTTCACACAAGACACTTGTTCTAAATGTTTGGCAATTGAACAAAGCAACATACAAGGTTGTCTTCCTAATACAAATGGTAGGGCATTCGACCCTCCTGGGTGCTTTATGAGATACTCAGATAAACCCTTCTTTGCTGATAACCAAACAATTGACATCAGTCCCTTAGTAAAACAAGGAGGAAGTTCAAGCAAGAAATGGGTCATATTTTCTGGTGCTATTGGAGGTGTAGTTTTTGTTGTGATTCTCCTTTTATTATTTACTTGGCATAAAGAATCCCAAAGTCCCAAGAGAGTTCCTAAAGCTTACATATTGGGAGAAACAGAGTTGAAAGCTCCAACCAAGTACAAGTATAGTGACTTGAAAGTTGCAACAAAAAATTTTAGTGAGAAAAATAAGCTAGGACAAGGAGGCTTTGGTGCTGTGTACAAGGGGACAATGAAAAATGGGAAAGTTGTTGCTGTAAAGAAATTACTTTCAGGGAAATCCAGCAAGATAGATGACGATTTTGAAAGTGAAGTAACACTTATAAGTAATGTTAATCACAAAAATTTGGTTCGACTTCTTGGTTGTTGCAGTAAAGGCCAAGACAGAATTCTTGTTTATGAATATATGGCAAACACCAGCCTTGACAAATTCTTATTTGGTGAAAGAAAATGTTTGCTTAATTGGAGACAACGCTATGATATAATTTTGGGCATAGCAAGGGGATTAGCCTATTTACATGAAGAATTTCATGTTTCTATCATACATAGAGATATTAAGACTGGAAATATCCTTTTAGACGAAGAATTTCAACCCAAAATTTCTGATTTTGGGTTGGTAAAGCTCCTACCAGAGGATCAATCTCATCTTAGCACAAGATTTGCTGGGACATTGGGATACACAGCACCTGAGTATGCACTCCATGGTCAATTGTCAGAAAAGGCTGATACATATAGTTATGGAATTGTAGTCCTTGAAATCATAAGTGGTCAAAAGAGTATTGATGTGAAGGTTATTGATGATGATGGTGAAGATGAATACCTTCTTCGACAAGCATGGAAATTACATGAGAGAGGTATGCACTTGGAGTTGGTGGACAAAAGGTTAGACCATAATAGTTATAAAGTAGAAGAAGTGAAGAAAGTAATAGATATTGCTTTGTTGTGCACTCAAGCAACACCTGCAATGAGGCCAGCCATGTCTGAAATAGTAGTCCTACTTAGTAGCAATGACTTACTTGATCATATGAAACCCTCAATGCCTATATTTTTCGAGTCAAAGTTAAAGCCCCTTGAAGATATGCATGCTTTAATTGGTTCCTCTACGACTAATGTTACTTCATCTAATTCTATAGTACCTGCTCAATGATCATGTATATGATAAAAAAGAAAATTCTTGTCTAGTTCACTATTAAATGTGAGTATTATTATTTGTAAATCTTTCTTTTTATTTTTAATAACAAACTACATTGACATTTCC 2226 0.3854 MVKLKVVALTFFMLWSLEGAIGDPQLNLLISECSGFGPPNLANLYQNLNASFADLKTQVNNQSKHFATAESVSGTSPVYAMFQCVKYLSNADCATCLTAAATSIRNCSATTNNGARVVYDGCFLRYESNEFFDETSLAGNSMVCGNEKAVEAATFNTIVQQVLMDLKVATPKITGFFAATKTQVVDGAIYAIAQCAETFTQDTCSKCLAIEQSNIQGCLPNTNGRAFDPPGCFMRYSDKPFFADNQTIDISPLVKQGGSSSKKWVIFSGAIGGVVFVVILLLLFTWHKESQSPKRVPKAYILGETELKAPTKYKYSDLKVATKNFSEKNKLGQGGFGAVYKGTMKNGKVVAVKKLLSGKSSKIDDDFESEVTLISNVNHKNLVRLLGCCSKGQDRILVYEYMANTSLDKFLFGERKCLLNWRQRYDIILGIARGLAYLHEEFHVSIIHRDIKTGNILLDEEFQPKISDFGLVKLLPEDQSHLSTRFAGTLGYTAPEYALHGQLSEKADTYSYGIVVLEIISGQKSIDVKVIDDDGEDEYLLRQAWKLHERGMHLELVDKRLDHNSYKVEEVKKVIDIALLCTQATPAMRPAMSEIVVLLSSNDLLDHMKPSMPIFFESKLKPLEDMHALIGSSTTNVTSSNSIVPAQ 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01590 647 FunFam Cysteine-rich receptor-like protein kinase 2 139 241 - -
Pste4g01590 647 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 79 628 - -
Pste4g01590 647 FunFam Cysteine-rich receptor-like protein kinase 2 402 607 - -
Pste4g01590 647 ProSiteProfiles Gnk2-homologous domain profile. 26 131 IPR002902 -
Pste4g01590 647 FunFam Cysteine-rich receptor-like protein kinase 2 25 131 - -
Pste4g01590 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Pste4g01590 647 SUPERFAMILY Protein kinase-like (PK-like) 309 616 IPR011009 -
Pste4g01590 647 CDD STKc_IRAK 331 596 - -
Pste4g01590 647 ProSiteProfiles Protein kinase domain profile. 325 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01590 647 FunFam Cysteine-rich receptor-like protein kinase 2 291 401 - -
Pste4g01590 647 ProSiteProfiles Gnk2-homologous domain profile. 137 241 IPR002902 -
Pste4g01590 647 Pfam Protein kinase domain 325 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01590 647 Gene3D Phosphorylase Kinase; domain 1 300 401 - -
Pste4g01590 647 Gene3D Transferase(Phosphotransferase) domain 1 402 609 - -
Pste4g01590 647 Pfam Salt stress response/antifungal 147 238 IPR002902 -
Pste4g01590 647 Pfam Salt stress response/antifungal 45 128 IPR002902 -
Pste4g01590 647 ProSitePatterns Protein kinases ATP-binding region signature. 331 354 IPR017441 GO:0005524
Pste4g01590 647 Gene3D - 28 131 IPR038408 -
Pste4g01590 647 Gene3D - 139 241 IPR038408 -
Pste4g01590 647 SMART serkin_6 325 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01590 Pste-Chr4 11999425 12004442 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01590 1 625 Receptor kinase-like Gene Family AT1G70520 37.638 7.06e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste4g01590 Pkinase 2.7e-49 CL0016