Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01587 AATCTGAACCAAAACACAACACTGGTATCTCAAACCAATCACATACACAAGATGCAAGTGCAACTTATTAAGTTCCTGACCATAACTTTGATATGGTGGAGCAATATTAATGTTGAATATGCAGTTGCAGCCACACGTGACACACGTTTGATAAACTCTGGTTGCAGCCCTGTCAATGCTACATCCCCGAGTAGCTTCTTTGCCAATGTGAATGAGACATTCTCAGAGCTGAGAGGGGATATTAACAACCAAAGCATGCACTTTGGCACATCACAGAAATCCAGAGGAGCTGTAATAACATATGCTATGTTTCAATGCAGAAACTATGTCTCCAAAAGTAACTGTAGTGCTTGCTTCAACACTGCCTCCATACAAGTCAGGGATATATGCAAAACAGCCAATGGTGCCAGAGTCATCTACAATGATTGCTTTCTCAGGTATGAGAGTGAGAGGTTTTACCAACAGACCAATGAACTTGGTGCTGGGGTAGCATGTGGGAACAAGACTTCAAATGCCACAGGTTTTATAGGTATTGGACAAGAAGCACTTAGAGAGCTTCAAATAGCAACACCAAAAATTAATGGTTTTTATGCAGCCACTAAGACAAAAGTGGCTGATGGTAGTGCAATGTATGCCATTGCACAGTGTGTTGAAACTGCTTCAGAGGCTAAGTGTCTGGATTGCATGACTATTGCATACAACAATTTACAAAGTTGCCTTCCCAACAAAGAGGGATCAGCATATGATGCTGGTTGCTTTATGAGATACTCAACCTCACCTTTCTTTGCTGACAATCAAACCATTAATATTGCACCATATTTAAAACAAGGAGGTTCAAGCAAAAAGTGGGCTATCATAGGTGGTGTTGTTGGAGGTGTTGTTGTCCTCCTTGTGTTAAAACCAAAGAAGGTTCCCAAAGCTGATATATTGGGAGCAACTGAGTTGAAAGGTCCCGTTAGCTTCAACTATAAAGATTTAAAAGTTGCAACAAAAATTTCAGGTACTCTGAAGAATGGAAAAGTTGTTGCAGTCAAGAAACTAGTATTGGGAAAATCAAGCAAAATGGAAGATGATTTTGAAAGTGAAGTAAAGCTTATAAGTAACGTTCATCATCGTAATCTCGTTAGACTTCTTGGTTGTTGTAGCAAAGGCCAAGAGAGAATCCTAGTTTATGAATACATGGCAAATAGCAGTCTTGACAAATTCTTATTTGGTAGCAAAAAAGGTTCTCTTAGCTGGAAACAACGCTATGATATAATTTTGGGCACCGCAAGAGGATTAGCATATCTACATGAGGAGTTTCATGTATCCATCATTCATCGAGATATAAAGACTGGTAATATCCTTTTAGATGATGATCTCCAACCCAAAATTGCAGATTTTGGGTTGGCAAGGCTTTTACCAAGGGACCGTTCTCATCTTAGCACAAAATTCGCAGGAACATTGGGATACACAGCACCAGAGTATGCAATGCAAGGTCAACTATCAGAGAAGGCTGATACCTATAGTTATGGTATTGTGGTCCTAGAAATCATAAGTGGTCAAAAAAGTACTGAGGTGAAGGTTAATGATGAGGGTCGTGAGTACCTTCTTCAACGAGCATGGAAATTGTATGAGAAAGACATGCAGTTGGAGCTTGTGGACAAAGATATAGACCCTAGTGAATATGATGCAGAAGAAGTGAAAAAAATCATAGAGATTGCTTTATTATGCACTCAAGCATCACCTGTAACAAGGCCAACAATGTCCGAATTAATAGTGCTACTCAAAAGCAAGAGTTTAGTGGAGAACCTACGACCAACTACACCTGTATTTGTTGACACGAAAATGATGAATCGAGAAACCACATCTCCTGATGAATCTAATGCTACTATCTCAATTTCTGTTCTATCAGCCCGATGATTATAAATGAGATTAATACAATAAAAAGGTTTTGATTACTAATTGTTCCAGTAAAGTAACAAGTCCTCCTTAAAGTGAAATAAGGAAATCACAACCAACTATGTTATATATCAATAGTTCAAATAGAACATATGATATGAAGTAAGGAATTCTATGGTGTTTTTTATTTACTAGTAGGGTATAGAATTAAGAATAGAATTATGTTTTGATGGTCCTGTGTTCAAAATGTCGCAAGTATATAACTTGAATTTCAAATCATGTGTTGTATGTATAGGTAAATAATGGATGGAATGTGAATGAGAATATGAATTTGAATTTCACTT 2225 0.3771 NLNQNTTLVSQTNHIHKMQVQLIKFLTITLIWWSNINVEYAVAATRDTRLINSGCSPVNATSPSSFFANVNETFSELRGDINNQSMHFGTSQKSRGAVITYAMFQCRNYVSKSNCSACFNTASIQVRDICKTANGARVIYNDCFLRYESERFYQQTNELGAGVACGNKTSNATGFIGIGQEALRELQIATPKINGFYAATKTKVADGSAMYAIAQCVETASEAKCLDCMTIAYNNLQSCLPNKEGSAYDAGCFMRYSTSPFFADNQTINIAPYLKQGGSSKKWAIIGGVVGGVVVLLVLKPKKVPKADILGATELKGPVSFNYKDLKVATKISGTLKNGKVVAVKKLVLGKSSKMEDDFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDKFLFGSKKGSLSWKQRYDIILGTARGLAYLHEEFHVSIIHRDIKTGNILLDDDLQPKIADFGLARLLPRDRSHLSTKFAGTLGYTAPEYAMQGQLSEKADTYSYGIVVLEIISGQKSTEVKVNDEGREYLLQRAWKLYEKDMQLELVDKDIDPSEYDAEEVKKIIEIALLCTQASPVTRPTMSELIVLLKSKSLVENLRPTTPVFVDTKMMNRETTSPDESNATISISVLSAR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01587 633 SMART serkin_6 323 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01587 633 ProSiteProfiles Protein kinase domain profile. 280 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01587 633 Pfam Salt stress response/antifungal 174 258 IPR002902 -
Pste4g01587 633 Pfam Salt stress response/antifungal 55 149 IPR002902 -
Pste4g01587 633 ProSiteProfiles Gnk2-homologous domain profile. 48 152 IPR002902 -
Pste4g01587 633 Pfam Protein tyrosine and serine/threonine kinase 337 587 IPR001245 GO:0004672|GO:0006468
Pste4g01587 633 ProSiteProfiles Gnk2-homologous domain profile. 156 261 IPR002902 -
Pste4g01587 633 SUPERFAMILY Protein kinase-like (PK-like) 336 607 IPR011009 -
Pste4g01587 633 Gene3D Phosphorylase Kinase; domain 1 328 394 - -
Pste4g01587 633 FunFam Cysteine-rich receptor-like protein kinase 2 47 152 - -
Pste4g01587 633 CDD STKc_IRAK 334 590 - -
Pste4g01587 633 FunFam Cysteine-rich receptor-like protein kinase 2 394 597 - -
Pste4g01587 633 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 101 617 - -
Pste4g01587 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Pste4g01587 633 Gene3D - 163 261 IPR038408 -
Pste4g01587 633 Gene3D - 47 152 IPR038408 -
Pste4g01587 633 Gene3D Transferase(Phosphotransferase) domain 1 395 601 - -
Pste4g01587 633 FunFam Cysteine-rich receptor-like protein kinase 2 160 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01587 Pste-Chr4 11979655 11984503 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01587 49 631 Receptor kinase-like Gene Family AT1G70520 34.304 1.04e-109 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste4g01587 PK_Tyr_Ser-Thr 5.2e-45 CL0016