Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01584 AATGAATAGAGATTGGTAGGGTCGCTTGGCTTCTCCCGCCTCTCGAATTCTTGAATCCGCTGAAACAGGGAAAGTAACCAAACCCCTCTTTTTCACACACACTCTCTGCGAGAAAGAGAGAGGAATGTTCATTTTTCCTCTCTCGCTCCCTCCCAATAATGGACACGCCCGATAGGAGCAAGATCAACACCCCTCTTTCCCAGTTTGAGGATTCACCTGTATTTAACTATATCAGTAATCTATCTCCTATAGAGCCCGTTAAGTCCGTTCACATTACTCAGACATTCAACTCGCTTAGCTTTTCGTCCCCTCCATCTGTTTTCACATCGCCCCATGTTAGCTGTCACAAGGAATCCAGATTCCTCAGGAGGCATAACCTTTTGGAGACATCCAAACCTAAGGCTTCGTCTGGAGATGTAAATAATGTTTATTCATGTGATGAGACTCCTGCAGATTCAACTCATGCATGTCACGAATCAAGTAAGCCACCGGAAAATGATGTTAAAAAGATTTCCAATGGAGATGCCTCAATTAACCCGTTTAATGAAAACCCGACTATCTCAATTGAGCTTCCACAAGTCATAAAATATAATGTTGGTAGCCCTGGGTATGAACCTCTACTTTGTGGTGATGAGGCTAACTCCCTTTTGGAACTCCCTGGTGAGCCAGCATCAGATGTTGCCTATGTTCCCGAAGGATCTGAAAAAGATTCAATTAAGGGTGAAATGGAACTTCCGGGATTATCTCAGATTGAGGCAAAAATTGATAACTCAGATTGTGGTGTTGATGGTTTAATTACTGAAGCCTCTGATCTGTTAATGTTTAGTTCTCCAAATGAAGCCTTTAAGGGTCTGAATAAACAATTAGACCCTTCAATGCACATTGTTAATGCAGTTGCTTCTGGCTCAGAACATGAAATTGAAGATCATCCTTGTGAATCAGCATCAGTCACAGACACAGGTCAGAGGCAGGACAATGTTGCTTTGGTGGCTAGCAATCCAAGTGAGAAAATGGATGATAAGCTTCTTTATGTGACACACCGAGGTATACGGAGACGCTGTCTAGATTTTGAGATGGCCAGTGTGCAAAGGAAGAACTCAGATGATACTTCAAACACCAATTCCAGTACAGCAAAATCTGATGAGAGGAATGTTGGTAATGAAAAGCAACTGCTTCCCACAAAACATAGCGGGAATTCACGGAGGTGTGTTTTGCCAGGAATTGGTTTGCACTTGAATGCACTTGCAACCTTAAACGATTGCAACAACATAAAAATTGAAAAGTTGTCATCTGGAAGGCAAACTAATATGCCTAGCACTCCTTCAGCCTTGCAACTCTCAGCAAACCAAGAACATCAACTAGCATTGATACCTGTATCAGTGGAAAGAGATTTGGAGCCAATCGAGAATGAGGTTCAGCCTGGTGAAGATTGTACCCAGCGCAAGTTGGAACCAGCTGGGGAAGGGGAGTCCTGTAAGCGTTGTAATTGTAAGAAATCAAAATGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGAGTCTACTGCATAGAACCTTGTTCCTGCCGCGATTGCTTCAACAAGCCGATTCATGTCGATACTGTTCTTCAAACTCGCCAGCAGATTGAGTCTCGTAATCCACTTGCATTTGCTCCTAAAGTCATTCGAAGTTCTGATTCTGTATCTGAAATTGGGGATGACCCTAACAAAACTCCAGCTTCAGCTAGACACAAAAGAGGATGCAATTGCAAGAAATCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTTGGTTGCTCAATAAGCTGCAGATGTGAAGGATGCAAGAACACATATGGTAGGAAGGATGGTTCTGTTCCTTCTGGAATCGAAGCTGAGACTGAAGAAGAAACAGAAGCGTGTGAGAAGGGTTTGGTGGAAAATGCTATACAGAAAACTGAAACTCGGAATACTGAAGACCATCCAGACCGTGCTCTTGCTGCAACACCATTACCGCTTTCCAGGTCATTGCTCCCATTACCCTTTTCATCAAAGGGTAAGCCACCAAGATCTTTTTTGACTACTATCTCCAGTTCTGGGTTGTTTGTCAGCCAAAAGCTTGGGAAATCAATTGCTCCACGGTCTCAACCTAAATGTGAAAAGCCTTTGCAAACTGTTACAGATGATGACTCTCCTGTTACCTGCATCAAAACTTCTTCTCCAAATGGCAAGAGGATCTCCTCTCCTAATTGTGACGTTGGATCATCTCCTACTCGCAGAGGTGGGAGGAAGTTGATATTACAATCTATCCCTTCATTTCCTTCTCTCACCCCTCACCATTAGAATGAGGATCTTAGCAGTAGTAAGTTGGTCTCCCGCCACCTCTCATGCCTTGGTTCGTTTTCAGTTGTTGCAGTTGAAGCTGTATGCTTATTGCTTAGATGAATGTACATGATTGAGCTTCGTTTCACTTTCGTAATAATATGTTGTCTTCATTTCAGTTGTATAATATCTTTGACCAATGGTTATCATCACTCCTAATGTGTACTTGGAGAATGATTTGTTATTAAGTCCCTATTGGTTATGTTGGACTTTCCTTTTTTAAAAGAACAATTTGATTTGTTATATGGAGTAAATGTGGTTGGTTGGTTCTG 2641 0.4222 MDTPDRSKINTPLSQFEDSPVFNYISNLSPIEPVKSVHITQTFNSLSFSSPPSVFTSPHVSCHKESRFLRRHNLLETSKPKASSGDVNNVYSCDETPADSTHACHESSKPPENDVKKISNGDASINPFNENPTISIELPQVIKYNVGSPGYEPLLCGDEANSLLELPGEPASDVAYVPEGSEKDSIKGEMELPGLSQIEAKIDNSDCGVDGLITEASDLLMFSSPNEAFKGLNKQLDPSMHIVNAVASGSEHEIEDHPCESASVTDTGQRQDNVALVASNPSEKMDDKLLYVTHRGIRRRCLDFEMASVQRKNSDDTSNTNSSTAKSDERNVGNEKQLLPTKHSGNSRRCVLPGIGLHLNALATLNDCNNIKIEKLSSGRQTNMPSTPSALQLSANQEHQLALIPVSVERDLEPIENEVQPGEDCTQRKLEPAGEGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCRDCFNKPIHVDTVLQTRQQIESRNPLAFAPKVIRSSDSVSEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNTYGRKDGSVPSGIEAETEEETEACEKGLVENAIQKTETRNTEDHPDRALAATPLPLSRSLLPLPFSSKGKPPRSFLTTISSSGLFVSQKLGKSIAPRSQPKCEKPLQTVTDDDSPVTCIKTSSPNGKRISSPNCDVGSSPTRRGGRKLILQSIPSFPSLTPHH 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01584 723 MobiDBLite consensus disorder prediction 670 698 - -
Pste4g01584 723 MobiDBLite consensus disorder prediction 309 345 - -
Pste4g01584 723 MobiDBLite consensus disorder prediction 653 723 - -
Pste4g01584 723 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 526 561 IPR005172 -
Pste4g01584 723 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 440 475 IPR005172 -
Pste4g01584 723 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 722 IPR044522 GO:0003700
Pste4g01584 723 ProSiteProfiles CRC domain profile. 438 563 IPR005172 -
Pste4g01584 723 MobiDBLite consensus disorder prediction 311 328 - -
Pste4g01584 723 MobiDBLite consensus disorder prediction 79 96 - -
Pste4g01584 723 MobiDBLite consensus disorder prediction 79 128 - -
Pste4g01584 723 MobiDBLite consensus disorder prediction 99 116 - -
Pste4g01584 723 SMART CXC_2 523 564 IPR033467 -
Pste4g01584 723 SMART CXC_2 437 478 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01584 Pste-Chr4 11965358 11970956 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01584 11 723 CPP Transcription Factor Family AT3G22780 43.258 5.11e-159 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pste4g01584 TCR 2.1e-11 No_clan