Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01583 ATGGTGAAAGTGAAGATCTTAGTAGCCATAACCATTTTGATGGTGTGGAGCTTTGAGGCTGTAATAGGAGACCCTCAATTGAATTTACTCACAAATGAGTGCAGCGCAGAGACCATAAACGACTTGTCCAACTTCAACAGAAACCTAAACGCGAGTTTTGCAGAGATGAGAGCGCAGGTTACCGACCATGGCAAGTACTTCGCCACCGCTCAATCCACCACCGGAACAGAGCCTGTCTACGCCATGTTTCAGTGCATGAATTACCTCTCCACCGCTGACTGCGCCGCCTGCTTCGACGCCGCCGCCGCCGAAATCCGCCACTGCACCACCCCCATCACCAACGGCGCCAGGGTTGTTTACGACGGCTGCTTCCTTAGGTATGAGAACAATGACTTCTTTGGTGATAACTCTCTGCCCGGCAACAGTGTGAGATGTGGAAATCAAACGGCAGTTGATGCCATTACTTTCAATACAACTATACAACAAATTTTACAAAACCTGCAAACAGCAACACCCAAAATTAAAGGTTTCTTTGCAACTACGAAGACACAAGTGGCTGACATTGCAATCTATGCTGTTGCACAATGTGCTGAAACTTTCACACAAGACACTTGTTCAAATTGTTTGTCAATTCAACACAACAACTTACAAGGTTGTCTTCCCAATACAAATAGTAGGGCAATTGATCCAGCAGGATGCTTTACAAGATACTCAGAGACACCCTTCTTTGCTGATAACCAAACCACTGATATCAGTCCCTTCTTAAACCAAGGGGGAAGTTCAAGTAAGAAGAAGTGGGTCGTTTTATCTGGTGGTATTGGAGGTGTAGTTGGAGGTGTAATCCTTGTTGTGATCCTTCTTTCATTATTTTCCTGTCATAAAAGATCCCAAAGTCCCAAGAGAGTTACTAAAGGTTATATGTTGGGTGAAACCGAGTTGAAAGCTCCAACCAGGTACAAGTATGGTGACTTGAAAGCTGCAACAAAAAATTTTAGTGAGAACAATAAGCTGGGAGAAGGAGGCTTTGGCACTGTATACAAGGGGACGATGAAAAATGGGAAAATCATTGCAGTAAAAAAGTTACTTTCAGGAAAATCTAACAAGATAGATGATGATTTTGAACGTGAGGTAACCCTTATAAGTAATGTTCATCACAAGAATTTGGTTCGACTTCTTGGTTGTTGCAGTAAAGGCCACAATAGAATTCTTGTTTATGAATACATGGCAAACAACAGCCTTGACAAATTCTTATTTGGTACAAGAAAAGGTTTACTCAACTGGAAACAACGATATGATATAATTTTGGGTGCAGCTAGGGGATTAGCCTATCTGCATGAGGAATTTCATGTTTCTATCATACATAGAGATATTAAGAGTGGCAATATCCTCTTGGATGAAGAATTTCAACCTAAAATTTCAGATTTTGGATTGGTAAAGCTTCTACCTGGGGACCAATCTCATCTTAGCACAAGATTTGCTGGGACATTAGGATATACAGCACCTGAGTATGCACTCCATGGTCAATTGTCAGAAAAGGCCGATATATACAGCTATGGAATTGTACTCCTAGAAATCATAAGTGGGCAAAAAAGTACTGATGTGAAGGTTCTTGATGATGGTAGTGAGGAAGATTACCTTCTTCGACAAGCATGGAAGTTGCATGACAGAGGCAATTTTTTGGAGTTAGTGGACAAAACCTTAAACCCTAATAGTTATGATGCAAATGAAGTGAAGAAAGTTTTAGACATTGCTTTGTTGTGCACCCAAGCATCGCCTGCAGTAAGGCCGGCCATGTCTGCAGTAGTAGTCCTACTCAATAGCAATAACTTAGTTGGGCATATGAGACCATCAATGCCTATCTTTATTGAATCAAAATTAAAGCCCCATAAAGATATCTCTGCTTCAACAAGTTCCTCTATGACTAACGCTACTACCTCCAATTCTATAGTACCTGCCCGATGA 1962 0.4154 MVKVKILVAITILMVWSFEAVIGDPQLNLLTNECSAETINDLSNFNRNLNASFAEMRAQVTDHGKYFATAQSTTGTEPVYAMFQCMNYLSTADCAACFDAAAAEIRHCTTPITNGARVVYDGCFLRYENNDFFGDNSLPGNSVRCGNQTAVDAITFNTTIQQILQNLQTATPKIKGFFATTKTQVADIAIYAVAQCAETFTQDTCSNCLSIQHNNLQGCLPNTNSRAIDPAGCFTRYSETPFFADNQTTDISPFLNQGGSSSKKKWVVLSGGIGGVVGGVILVVILLSLFSCHKRSQSPKRVTKGYMLGETELKAPTRYKYGDLKAATKNFSENNKLGEGGFGTVYKGTMKNGKIIAVKKLLSGKSNKIDDDFEREVTLISNVHHKNLVRLLGCCSKGHNRILVYEYMANNSLDKFLFGTRKGLLNWKQRYDIILGAARGLAYLHEEFHVSIIHRDIKSGNILLDEEFQPKISDFGLVKLLPGDQSHLSTRFAGTLGYTAPEYALHGQLSEKADIYSYGIVLLEIISGQKSTDVKVLDDGSEEDYLLRQAWKLHDRGNFLELVDKTLNPNSYDANEVKKVLDIALLCTQASPAVRPAMSAVVVLLNSNNLVGHMRPSMPIFIESKLKPHKDISASTSSSMTNATTSNSIVPAR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01583 653 ProSitePatterns Protein kinases ATP-binding region signature. 337 360 IPR017441 GO:0005524
Pste4g01583 653 Gene3D - 26 132 IPR038408 -
Pste4g01583 653 Gene3D - 141 242 IPR038408 -
Pste4g01583 653 ProSiteProfiles Gnk2-homologous domain profile. 27 132 IPR002902 -
Pste4g01583 653 FunFam Cysteine-rich receptor-like protein kinase 2 26 132 - -
Pste4g01583 653 FunFam Cysteine-rich receptor-like protein kinase 2 408 613 - -
Pste4g01583 653 Pfam Protein kinase domain 332 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01583 653 Gene3D Phosphorylase Kinase; domain 1 305 407 - -
Pste4g01583 653 ProSiteProfiles Gnk2-homologous domain profile. 138 242 IPR002902 -
Pste4g01583 653 FunFam Cysteine-rich receptor-like protein kinase 2 140 242 - -
Pste4g01583 653 CDD STKc_IRAK 337 606 - -
Pste4g01583 653 Gene3D Transferase(Phosphotransferase) domain 1 408 613 - -
Pste4g01583 653 SMART serkin_6 331 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01583 653 SUPERFAMILY Protein kinase-like (PK-like) 315 623 IPR011009 -
Pste4g01583 653 ProSiteProfiles Protein kinase domain profile. 331 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01583 653 MobiDBLite consensus disorder prediction 632 653 - -
Pste4g01583 653 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 80 638 - -
Pste4g01583 653 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Pste4g01583 653 Pfam Salt stress response/antifungal 149 239 IPR002902 -
Pste4g01583 653 FunFam Cysteine-rich receptor-like protein kinase 2 295 407 - -
Pste4g01583 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01583 Pste-Chr4 11955673 11960859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01583 7 653 Receptor kinase-like Gene Family AT1G70520 36.225 1.43e-125 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste4g01583 Pkinase 2.4e-48 CL0016