Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01582 GGTTTAGACCAAATTTGAGAATCAGAGAATAGAATATGGCGAAACTGAAACTGAAGGTGGTAGCAGCCATAACTATTTTGATGGTGTGGAGCTTAGAGAGTGTAATAGGAGATCCTCAACAGAATTTACTTTCAAATGAGTGCAGCGATGTGACGGTTAACGACTTATCAAGCTTCAATCGAAACCTAAACGCGAGTTTTGCAGAGATGAGAGCGCAGGTTAGCAACCATGGCAAGTACTTCGCCACCGCTCAATCCACCACCGGAACAGAGCCTGTCTACGCCATGTTTCAGTGCATGAATTACGTCTCCGTCGCTGACTGCGCCGCCTGCTTCGACGCCGCCGCCGTTGAAATCCGCAACTGCTCCGCCCCGATTACCAACGGCGCCAGGGTTGTTTACGACGGCTGCTTCCTCAGGTATGAGAGCAGTGATTTTTTTGGCAAGAACATTCTACCCGGCAACAATATGAGATGCGGACATCAAATAGCAGTTGAAGTCACTACTTTTAGTACAATTGTACAACAAATATTAAAGGATCTGCAAATTGCAATACCCAAAATTAGTGGTTTCTTTGCAAATACCAAAACAAAAGTAGCTGATATTGCAATCTATATTGTTGCACAATGTGCTGAAACTTTCAAACAAGACAAATGTTTAAATTGTTTGTCAATTCAACACAACAACTTAAAAGCTTGTCTTCCTAATACAAATGGTTGGTCAATTGATCCTGCTGGATGCTTTACAAGATACTCAGATACACCCTTCTTTGCCGATAATCAAACCACTGATATTAGTCCTTTCTTAAAACAAGGGGGAAGTTCAAGCAAGAAGTGGGTCATTTTTCCTGGTACTGTTGGAGGTGTAATCCTTGTTGTGATTCTTCTTTCATTATTTTTCTGGCATAGAAGATCCCAGAGCCCCAAGAGAACTCCTAGAGATTACGCATTGGGGAAAACTGAGTTGAAAGCTCCAACCAAGTACAAGTATAGTGACTTGAAAGCTGCAACAAGAAATTTTAGTGAGAAAAATAAGCTAGGAGAAGGAGGCTTTGGAGTTGTATACAAGGGGGTGATGCGAAATGGAAAAACTGTTGCAATAAAAAAGTTACTTTCAGGAAAATCCAACATGATTGATGACAATTTTGAAAGCGAAGTAACACTTATAAGTAATGTTCATCACAAAAATTTGGTTCGACTTCTTGGTTGTTGCAGTAAAGGCCACAACAGAATTCTTGTTTACGAATACATGGCAAACAACAATCTTGACACATTTTTATTTGGTACAAGAAAAGGTTTACTTAACTGGAGACAACGATATGATATAATTTTGGGCACAGCAAGAGGATTGGCCTATTTACATGAGGAATTTCATGTTTCTATCATACATAGAGATATTAAGAGTGGCAATATCCTTTTGGATGAAGAATTTCAACCCAAAATTTCTGATTTTGGGTTGGTAAAACTCCTACCAGGAGACCAATCTCATGTTAGCACAAGATTTGTCGGCACATTGGGATACACAGCACCTGAGTATGCACTCCATGGCCAATTATCAGAAAAGGCTGATACATATAGCTATGGAATTGTAGTCCTAGAAATCATAAGTGGGCAAAAATGTATTGATGTTAAGGTAGTTGATGATGATGGTGAGGAAGATTACCTTCTTCGGCAAGCATGGAAGTTGTATGAGAAAGGCAACTTTTTGGAGTTAGTGGACAAAAGCTTAGATCCTGATACTTATGATGCAAAAGAAGTGAAGAAAGTCTTAGACATTGCTTTGTTGTGCACTCAAGCATCTGCTGCAACGAGGCCAGCCATGTCTGAAGTAGTAGTCCTACTTAGTAGCAATAACTTATTTAAGCATATGAGACCTTTAATGCCCATCTTTTTTGAATCAAAATTAAGGCCCAACAAAGATATCTCTACTTCAACTAGTTCCTCAACAACTAATGCTACTACCTCTAACTTTATATTACCTGCTCGATAATTAAGTATACACTATAAAAGAAGCTTGTAAAAAAAATTATGTAAAAGAATATTTTTGTCTAATTCAATGTTCAAA 2063 0.3878 MAKLKLKVVAAITILMVWSLESVIGDPQQNLLSNECSDVTVNDLSSFNRNLNASFAEMRAQVSNHGKYFATAQSTTGTEPVYAMFQCMNYVSVADCAACFDAAAVEIRNCSAPITNGARVVYDGCFLRYESSDFFGKNILPGNNMRCGHQIAVEVTTFSTIVQQILKDLQIAIPKISGFFANTKTKVADIAIYIVAQCAETFKQDKCLNCLSIQHNNLKACLPNTNGWSIDPAGCFTRYSDTPFFADNQTTDISPFLKQGGSSSKKWVIFPGTVGGVILVVILLSLFFWHRRSQSPKRTPRDYALGKTELKAPTKYKYSDLKAATRNFSEKNKLGEGGFGVVYKGVMRNGKTVAIKKLLSGKSNMIDDNFESEVTLISNVHHKNLVRLLGCCSKGHNRILVYEYMANNNLDTFLFGTRKGLLNWRQRYDIILGTARGLAYLHEEFHVSIIHRDIKSGNILLDEEFQPKISDFGLVKLLPGDQSHVSTRFVGTLGYTAPEYALHGQLSEKADTYSYGIVVLEIISGQKCIDVKVVDDDGEEDYLLRQAWKLYEKGNFLELVDKSLDPDTYDAKEVKKVLDIALLCTQASAATRPAMSEVVVLLSSNNLFKHMRPLMPIFFESKLRPNKDISTSTSSSTTNATTSNFILPAR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01582 650 FunFam Cysteine-rich receptor-like protein kinase 2 28 134 - -
Pste4g01582 650 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Pste4g01582 650 MobiDBLite consensus disorder prediction 629 650 - -
Pste4g01582 650 SMART serkin_6 328 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01582 650 Gene3D Transferase(Phosphotransferase) domain 1 405 612 - -
Pste4g01582 650 Pfam Salt stress response/antifungal 40 131 IPR002902 -
Pste4g01582 650 Pfam Salt stress response/antifungal 155 241 IPR002902 -
Pste4g01582 650 SUPERFAMILY Protein kinase-like (PK-like) 313 630 IPR011009 -
Pste4g01582 650 FunFam Cysteine-rich receptor-like protein kinase 2 405 610 - -
Pste4g01582 650 FunFam Cysteine-rich receptor-like protein kinase 2 142 244 - -
Pste4g01582 650 Pfam Protein kinase domain 328 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01582 650 Gene3D - 28 134 IPR038408 -
Pste4g01582 650 Gene3D - 143 244 IPR038408 -
Pste4g01582 650 ProSiteProfiles Protein kinase domain profile. 328 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01582 650 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 636 - -
Pste4g01582 650 FunFam Cysteine-rich receptor-like protein kinase 2 292 404 - -
Pste4g01582 650 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Pste4g01582 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Pste4g01582 650 Gene3D Phosphorylase Kinase; domain 1 292 404 - -
Pste4g01582 650 ProSiteProfiles Gnk2-homologous domain profile. 140 244 IPR002902 -
Pste4g01582 650 CDD STKc_IRAK 334 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01582 Pste-Chr4 11928470 11938358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01582 9 645 Receptor kinase-like Gene Family AT1G70520 34.615 1.28e-118 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste4g01582 Pkinase 2.1e-48 CL0016