Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01581 ATGGATTCAGAAAGTGAGGTTATGCTGAAGATGAGATTGGAAGCAGCAACATTGAATACAAAGATAAGTGAAGAAAACCTTAGCAAAAATAATATGATTTTTAGGGCAGATAAAATTAATTTGAAGGATTTGGATCTCATGCTAGAAAAACACTTGAGCAAGATGTTTTATGAAAGCATTCACGCCAAAAGAGTTAAAAAAGAATGGGAAATTGATCTGCGCAAATTGGATATACAATACTCTGTAGCAAATGGAGCATATGGCACTGTATACAAGGGTACCTACAACAGTCAAGACGTTGCAGTGAAAGTCTTGAATTGGGGTGAGGATGGTGTTGCCACCGCCGCTGAAATTGCTGCTTTACGAGCATCATTTTGGCAGGAGGTTACTGTATGGCAAAAACTTGATCATCCAAATGTCACAAAATTTATTGGAGCTTCGATATGTTCTTCAAATCTTAACATTCCCTCACCAATCTGTGGTCAAAATTCTCTTCCTTCCAACGCGTGCTGTGTTGTTGCTGAATTTCTTCCTGGTGGGACATTGAAACAATACTTGTTTAAAAATAGGCAGACAAGACTCCCATATAAGGTTGTGATTCAGCTGGCTTTGGACGTCTCTAGAGGTCTTAGTTATCTTCATTCAAAGAACATTGTTCACCGCGACGTAAAAACTGATAATATGTTGTTAGATGCCAATCAAAAATTGAAAATAGCTGATTTTGGAATTTCTCGTGTTGAATCTATAAATCTAAGTGAGATGACAAGTGAAACGGGAACCTATGGATATATGGCACCAGAGGTTTTAAATGGTAAACCTTACAACAGAAAATGTGATGTCTATAGCTTTGGCATTTGCTTGTGGGAAATTTATTGCTGTAATATGCATTATTCAAAGCTAAGCCTTGCTACTGTGTCATGTATGGTTATTAATCAGCATTTACAACCAGAGATTCCAAGAAGTTGTCCAAGCGCCTTAGCAAACATAATGCGAAAATGCTGGGATGCAAAACCAGAGAGGCGTCCAGAAATGCATGAAGTGGTGGAAATGTTGGAAGCAATTGATACAAGCAAAAGAGGTGAAATGATACGCAAACATACTCCATTTTGCTTGTGTTTTGTATCTCCTCAACGTCCCTAG 1140 0.3807 MDSESEVMLKMRLEAATLNTKISEENLSKNNMIFRADKINLKDLDLMLEKHLSKMFYESIHAKRVKKEWEIDLRKLDIQYSVANGAYGTVYKGTYNSQDVAVKVLNWGEDGVATAAEIAALRASFWQEVTVWQKLDHPNVTKFIGASICSSNLNIPSPICGQNSLPSNACCVVAEFLPGGTLKQYLFKNRQTRLPYKVVIQLALDVSRGLSYLHSKNIVHRDVKTDNMLLDANQKLKIADFGISRVESINLSEMTSETGTYGYMAPEVLNGKPYNRKCDVYSFGICLWEIYCCNMHYSKLSLATVSCMVINQHLQPEIPRSCPSALANIMRKCWDAKPERRPEMHEVVEMLEAIDTSKRGEMIRKHTPFCLCFVSPQRP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01581 379 Gene3D Transferase(Phosphotransferase) domain 1 179 368 - -
Pste4g01581 379 Gene3D Phosphorylase Kinase; domain 1 64 160 - -
Pste4g01581 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Pste4g01581 379 FunFam Kinase suppressor of Ras 1 65 160 - -
Pste4g01581 379 CDD STKc_MAP3K-like 85 351 - -
Pste4g01581 379 SMART serkin_6 76 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01581 379 Pfam Protein tyrosine and serine/threonine kinase 78 351 IPR001245 GO:0004672|GO:0006468
Pste4g01581 379 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 69 357 - -
Pste4g01581 379 PRINTS Tyrosine kinase catalytic domain signature 212 230 IPR001245 GO:0004672|GO:0006468
Pste4g01581 379 PRINTS Tyrosine kinase catalytic domain signature 322 344 IPR001245 GO:0004672|GO:0006468
Pste4g01581 379 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672|GO:0006468
Pste4g01581 379 PRINTS Tyrosine kinase catalytic domain signature 174 187 IPR001245 GO:0004672|GO:0006468
Pste4g01581 379 ProSiteProfiles Protein kinase domain profile. 76 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g01581 379 SUPERFAMILY Protein kinase-like (PK-like) 54 351 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01581 Pste-Chr4 11924631 11927234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01581 18 379 MAP Kinase Kinase Kinase AT3G22750 64.835 0.0 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pste4g01581 PK_Tyr_Ser-Thr 2.3e-59 CL0016