Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01577 ACAAAACAAAGACTCACACATTACGCATGCATATTATTACGTTACATTTGATTTGATTTGTCCTCGCAATTCCGAATCTGGAAACAATTTCTGATGCCTCATCAAAGAGCTAATCTCTTGTTCCTTCTATGCCTTCTGTGCTATTCTCTCCACGCCATTGCCGGAAAGAGCTATTACGACGTACTTGAAATACCGAAAGGCGCGTCGGAGGAGCAGATAAAGAGAGCGTACAGGAAGCTCGCGTTGAAGTACCATCCCGATAAGAACCCTGGCAATCAAGAAGCCAATAAGAGATTCTCCGAGATCAACAATGCGTATGAAGTACTCTCCGACAGCGAGAGGAGAAGCATTTACGACAGGTATGGGGAAGAAGGTTTGAAACAGCATATGGCCGGAGGGGGCAGAGGCGGGGGAATGGACTTCCAAGACATTTTCTCCTCCTTCTTCGGGGGAGGTCCAACGGAGGAGGAAGAGACAACTCTAAAAGGTGATGATGTGCTTGTTGAATTGGATGCAACGCTCCATGATTTGTACATGGGAGGTTCCTTAAAGGTTTGGAGGGAGAAAGATGTTTTAAAGCCAGCACCAGGGAAGAGACGATGTAACTGTAGAAACAAGGTTTATCACAAGCAAATAGGTCCTGGGATGTTTCAACAGTTCACAGAGCTGGTCTGTGAACAATGTCCAAATGTTAAATATGAAAGAGATGGTTATTTCATCACTGTTGATATTGAGAAAGGCATGCAAAATGAGCAGGAAGTTGTATTTTATGAGGATGGTGAGCCCATAATTGATGGGGAGTGTGGAGATCTAAGGTTTCAAATCCGTACAGCACCCCATGATCTCTTCAAGAGGGAAGGCAATGACTTGCACTCCACTGTCACTATAACTCTGGTTCAAGCACTAGTCGGATTTGAGAAGACTATTAAACACCTAGATGAGCATCTAGTGGACATAAGCGCGAAGGGAATCACAAATCCAAAGCAAGTGAGGAAGGTCAAAGGAGAGGGCATGCCACTGCATATGAACTCAACAAAAGGAGATCTATACGTCACGTTTGAGGTTCTATTCCCAACCTCACTAACCGAGGAGCAGAAAGCAAGTATAATAGCAATTTTTAAT 1122 0.4412 MPHQRANLLFLLCLLCYSLHAIAGKSYYDVLEIPKGASEEQIKRAYRKLALKYHPDKNPGNQEANKRFSEINNAYEVLSDSERRSIYDRYGEEGLKQHMAGGGRGGGMDFQDIFSSFFGGGPTEEEETTLKGDDVLVELDATLHDLYMGGSLKVWREKDVLKPAPGKRRCNCRNKVYHKQIGPGMFQQFTELVCEQCPNVKYERDGYFITVDIEKGMQNEQEVVFYEDGEPIIDGECGDLRFQIRTAPHDLFKREGNDLHSTVTITLVQALVGFEKTIKHLDEHLVDISAKGITNPKQVRKVKGEGMPLHMNSTKGDLYVTFEVLFPTSLTEEQKASIIAIFN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01577 343 SUPERFAMILY Chaperone J-domain 24 121 IPR036869 -
Pste4g01577 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 252 336 IPR008971 GO:0006457|GO:0051082
Pste4g01577 343 CDD DnaJ_C 199 330 - -
Pste4g01577 343 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Pste4g01577 343 Gene3D DnaJ domain 23 126 IPR036869 -
Pste4g01577 343 Gene3D - 249 327 - -
Pste4g01577 343 FunFam DnaJ subfamily B member 11 248 343 - -
Pste4g01577 343 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 11 5 341 - -
Pste4g01577 343 FunFam DnaJ protein ERDJ3B 23 127 - -
Pste4g01577 343 SMART dnaj_3 25 83 IPR001623 -
Pste4g01577 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 129 254 IPR008971 GO:0006457|GO:0051082
Pste4g01577 343 CDD DnaJ 27 80 IPR001623 -
Pste4g01577 343 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Pste4g01577 343 Gene3D - 127 248 - -
Pste4g01577 343 Pfam DnaJ domain 27 88 IPR001623 -
Pste4g01577 343 PRINTS DnaJ domain signature 63 83 IPR001623 -
Pste4g01577 343 PRINTS DnaJ domain signature 46 61 IPR001623 -
Pste4g01577 343 PRINTS DnaJ domain signature 83 102 IPR001623 -
Pste4g01577 343 PRINTS DnaJ domain signature 28 46 IPR001623 -
Pste4g01577 343 Pfam DnaJ C terminal domain 137 327 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01577 Pste-Chr4 11896929 11901132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01577 27 90 C2H2 Transcription Factor Family AT1G74250 43.478 5.16e-09 55.8